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14 results for “cDNA library”

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dryad28/100

Data from: Characterization of leukemia-inducing genes using a proto-oncogene/homeobox gene retroviral human cDNA library in a mouse in vivo model

The purpose of this research is to develop a method to screen a large number of potential driver mutations of acute myeloid leukemia (AML) using a retroviral cDNA library and murine bone marrow transduction-transplantation system. As a proof-of-concept, murine bone marrow (BM) cells were transduced with a retroviral cDNA library encoding well-characterized oncogenes and homeobox genes, and the virus-transduced cells were transplanted into lethally irradiated mice. The proto-oncogenes responsible for leukemia initiation were identified by PCR amplification of cDNA inserts from genomic DNA isolated from leukemic cells. In an initial screen of ten leukemic mice, the MYC proto-oncogene was detected in all the leukemic mice. Of ten leukemic mice, 3 (30%) had MYC as the only transgene, and seven mice (70%) had additional proto-oncogene inserts. We repeated the same experiment after removing MYC-related genes from the library to characterize additional leukemia-inducing gene combinations. Our second screen using the MYC-deleted proto-oncogene library confirmed MEIS1and the HOX family as cooperating oncogenes in leukemia pathogenesis. The model system we introduced in this study will be valuable in functionally screening novel combinations of genes for leukemogenic potential in vivo, and the system will help in the discovery of new targets for leukemia therapy.

opencc-zeroDec 2014View details →
dryad28/100

Data from: Characterization of leukemia-inducing genes using a proto-oncogene/homeobox gene retroviral human cDNA library in a mouse in vivo model

Open the record for dataset details and reuse information.

publicNov 2016View details →
geo24/100

A novel NGS-based method can improve the efficiency and sensitivity of Y2H screening with cDNA library

GEO Series GSE179488. Arabidopsis thaliana. 9 samples. Type: Other.

openGEO-OpenJul 2021View details →
geo24/100

Single cell RNA-seq data of human hESCs comparing experiments with cDNA library equalization

GEO Series GSE156494. Homo sapiens. 288 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenNov 2021View details →
geo24/100

Deep sequencing of small RNAs and degradome cDNA library in soybean

GEO Series GSE33380. Glycine max. 2 samples. Type: Non-coding RNA profiling by high throughput sequencing.

openGEO-OpenNov 2011View details →
geo24/100

A non-radioactive, improved PAR-CLIP and small RNA cDNA library preparation protocol

GEO Series GSE163925. Homo sapiens. 21 samples. Type: Other.

openGEO-OpenDec 2020View details →
geo24/100

Hybridization of human oocyte cDNA library on the multi-species oocyte array to assess for gene conservation using a temperature stringency criteria

GEO Series GSE23963. Xenopus laevis; Bos taurus; Mus musculus; Homo sapiens. 6 samples. Type: Expression profiling by array.

openGEO-OpenDec 2010View details →
geo20/100

Sequencing of First-strand cDNA Library Reveals Full-length Transcriptomes

GEO Series GSE63424. Mus musculus. 32 samples. Type: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing.

openGEO-OpenJan 2015View details →
geo20/100

Repertoire of miRNAs in epithelial ovarian cancer determined by next generation sequencing of small RNA cDNA libraries

GEO Series GSE15190. Homo sapiens. 4 samples. Type: Non-coding RNA profiling by high throughput sequencing.

openGEO-OpenMar 2009View details →
geo20/100

Deep sequencing of the degradome cDNA library in soybean

GEO Series GSE33379. Glycine max. 1 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenNov 2011View details →
geo16/100

Analysis of a normalised equine cDNA library using deep sequencing

GEO Series GSE26794. Equus caballus. 1 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJun 2012View details →
geo16/100

Verification of the quality of the retroviral cDNA library composed of 176 proto-oncogenes and HOX genes

GEO Series GSE74806. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenNov 2016View details →
geo12/100

Inducible meiotic cDNA libraries for genome-wide studies of gene isoforms

GEO Series GSE174268. Saccharomyces cerevisiae; Escherichia coli. 175 samples. Type: Expression profiling by high throughput sequencing; Other.

openGEO-OpenMay 2021View details →
geo12/100

Pituitary Tumors cDNA SAGE Libraries

GEO Series GSE37153. Homo sapiens. 4 samples. Type: Expression profiling by SAGE.

openGEO-OpenApr 2014View details →

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record

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