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8 results for “canopy microclimate”
Canopy Phenology, Remote Sensing and Microclimate at Harvard Forest 2006-2011
Our research at the Harvard Forest walk-up tower site examines how seasonality of canopy leaf area, or canopy phenology, influences, and is influenced by, local climate. As part of this activity we are studying methods for (and limits to) remote sensing of canopy phenology. To address this research topic, we have initiated measurements to quantify how radiation fluxes through a deciduous forest canopy are modified by seasonal canopy leaf dynamics. We continuously measure above- and below-canopy radiation fluxes at a variety of spectral bands (shortwave, photosynthetic) and with digital photography. These measurements provide a surrogate measures of canopy leaf area dynamics, and directly represent the radiation component of the surface energy balance. These measurements complement ongoing microclimate and eddy covariance measurements of water and carbon exchange at the EMS flux tower.
Example data for microclimf: Fast above, below or within canopy gridded microclimate modelling with R
<p>runmicrobig.zip - example data required to run function runmicro_big in package vignette</p> <p>Package available: https://github.com/ilyamaclean/microclimf</p>
Data and Script used in "Effects of canopy gaps on microclimate, soil biological activity and their relationship in a European mixed floodplain forest"
<p>The R code and data provided in this repository allow to reproduce the data carpentry, analysis and visualization of “Effects of canopy gaps on microclimate, soil biological activity and their relationship in a European mixed floodplain forest” (https://doi.org/10.1016/j.scitotenv.2024.173572).</p> <p> </p> <p>Folder structure</p> <p> </p> <p>Data abstracts:</p> <p>Data_abstract_climate.pdf</p> <p>Data_abstract_soil_biotics.pdf</p> <p>Data_abstract_soil_abiotics_openness.pdf</p> <p> </p> <p>Data:</p> <p>Climate_data.xlsx</p> <p>Soil_biotics.xlsx</p> <p>Soil_abiotics_openness.xlsx</p> <p> </p> <p>R Scripts:</p> <p>00-preamble.R loads all required packages</p> <p>01-data-carpentry.R loads all datasets and prepares the analysis of all experimental periods.</p> <p>02-data-analyses-microclimate.R compares understorey air and soil microclimate between forest types and treatments, presents diurnal and seasonal variations and tests the relationship of under- and overstorey openness on microclimate.</p> <p>03-data-analyses-decomposition.R compares decomposition rates and feeding activity between forest types and treatments and models the dependencies of soil biological activity on microclimate and soil abiotic factors.</p> <p> </p> <p>Information of related software and package versions used in the script:<br>R version 4.3.2 (2023-10-31 ucrt)<br>Platform: x86_64-w64-mingw32/x64 (64-bit)<br>Running under: Windows 10 x64 (build 19045)<br>Matrix products: default</p> <p> </p> <p>Contact</p> <p>Please contact me at annalena.lenk@uni-leipzig.de if you have further questions.</p>
Datasets used for the publication: UAV-Lidar reveals that canopy structure mediates the influence of edge effects on forest diversity, function and microclimate
<p>Datasets used for the publication: UAV-Lidar reveals that canopy structure mediates the influence of edge effects on forest diversity, function and microclimate.</p> <p>The file "Blanchard_et_al_JoE_2023_data_plot_trees.csv" contains individual tree indentification data for the 46 plots used in the study.</p> <p>The file "Blanchard_et_al_JoE_2023_data_plot_aggregated.csv" contains plot-level aggregated metrics used for the analyses:</p> <p>- distance to the forest edge</p> <p>- diversity indices : the 20-sp rarefied species richness "rar_sp_richness_20" and the 20-sp rarefied Beta diversity "Beta_div" which corresponds to the plos coordinates on the PCoA first axis.</p> <p>- functional indices: the community weighted mean trait values for the four traits used in this study : ,"WD","SLA","LA","LDMC"; the fonctional divergence index "FD_trans.FDiv"; and the synthetic community weigthed mean trait wich corresponds to the postion on plots on the principal component analysis of species trait values "Functional_composition_trans". Note that the SLA and LA values were log-transformed before computing "FD_trans.FDiv" and "Functional_composition_trans".</p> <p>- UAV-LiDAR-dervived metrics: canopy height, gap fraction ("gap_fraction2"), slope, curvature</p> <p>- The estimated plot above graound biomass "agb_plot", and the mean value of the vapor pressure deficit during the drisest month "max_monthly_VPD".</p> <p>- coordinates of the plots in UTM 58S (Coordinate reference system)</p> <p>Please read the material and method section of the article for more informations on this dataset.</p>
Data from: Managing canopy cover to preserve forest microclimate and diverse macroarthropod communities in times of drought
Open the record for dataset details and reuse information.
Supplementary material 1 from: Ruland KT, Montague T, Helwi P (2023) Impact of hail-netting on Vitis vinifera L. canopy microclimate, leaf gas exchange, fruit quality, and yield in a semi-arid environment. Viticulture Data Journal 555: e108805. https://doi.org/10.3897/vdj.555.e108805
Hail-netting on vines
Supplementary material 3 from: Ruland KT, Montague T, Helwi P (2023) Impact of hail-netting on Vitis vinifera L. canopy microclimate, leaf gas exchange, fruit quality, and yield in a semi-arid environment. Viticulture Data Journal 555: e108805. https://doi.org/10.3897/vdj.555.e108805
Compact canopy under hail-netting
Supplementary material 2 from: Ruland KT, Montague T, Helwi P (2023) Impact of hail-netting on Vitis vinifera L. canopy microclimate, leaf gas exchange, fruit quality, and yield in a semi-arid environment. Viticulture Data Journal 555: e108805. https://doi.org/10.3897/vdj.555.e108805
Li-Cor-6400 machines below hail-netting
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
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DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.