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5 results for “cellular communities”

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edi52/100

Data in support of 'Mechanistic insights into plant community responses to environmental variables: genome size, cellular nutrient investments, and metabolic trade-offs.'

Data was collected to examine whether and how the plant genome size (GS) influences traits (stomata size, stomata density, cellular and tissue level carbon (C), nitrogen (N), and phosphorus (P) contents) and metabolic-tradeoffs (of photosynthesis, evapotranspiration, water-use, efficiency) of plants in treatment plots in which nothing, N, P, or NP had been annually added. Data was collected from ~500 plants from seven grassland sites that are all part of the Nutrient Network (https://nutnet.org), a globally distributed experiment in which plots have different nutrient amendment treatments that are administered identically to allow cross-site comparisons of the effects of nutrients on biodiversity patterning. The sites chosen varied along a North-South latitude, longitude, mean annual precipitation (MAP) and mean annual temperature (MAT) gradient.

openCC (other)Sep 2024View details →
zenodo40/100

Source Data for main text and supplemental figures for manuscript "Community assessment of methods to deconvolve cellular composition from bulk gene expression"

<p>Source Data for main text and supplemental figures for manuscript "Community assessment of methods to deconvolve cellular composition from bulk gene expression"</p>

openmit-licenseMay 2024View details →
zenodo24/100

Metaproteogenomics resolution of a high-CO2 aquifer community reveals a complex cellular adaptation of groundwater Gracilibacteria to a host-dependent lifestyle

<p>This dataset contains the Supplementary files S1 and S2 of the publication "Metaproteogenomics resolution of a high-CO2 aquifer community reveals a complex cellular adaptation of groundwater Gracilibacteria to a host-dependent lifestyle". The first of the datasets is a protein sequence database used as a reference for metaproteomics in the study (with simplified unique headers compatible with the software). The metadata file contains reference names to convert ProteinIDs from the fasta file to their original GeneID as well as further Metadata (such as the functional and taxonomic annotation of the protein identifiers). For more information, please read the publication, currently available as a preprint at https://www.biorxiv.org/content/10.1101/2023.12.18.572140v2 .</p>

opencc-by-4.0Aug 2024View details →
geo24/100

Community assessment of methods to deconvolve cellular composition from bulk gene expression

GEO Series GSE199324. Homo sapiens. 118 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJun 2022View details →
geo16/100

Post-COVID impairment of memory T cell responses to community-acquired pathogens can be rectified by activating cellular metabolism

GEO Series GSE312633. Homo sapiens. 32 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2026View details →

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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record

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