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6 results for “copper binding”
Copper binding leads to increased dynamics in the regulatory N-terminal domain of full-length human copper transporter ATP7B
<p>Dataset from article "Copper binding leads to increased dynamics in the regulatory N-terminal domain of full-length human copper transporter ATP7B"</p> <p>Contains simulation input files and reduced trajectories. </p> <p>The files are sorted into four folders: reA_apo, reA_holo, reB_apo, reB_holo. Each folder contains the following (types of) files:</p> <p>Topology file: topol.top<br> Index file: index.ndx<br> Production mdp files for each replica: production_rep{i}.mdp<br> Starting structures as .gro files: ATP7B_E2_re{A/B}_{apo/holo}_rep{i}_start.gro<br> 10 ns step trajectories in .xtc format: ATP7B_E2_re{A/B}_{apo/holo}_rep{i}_trajectory.xtc<br> Folder with equilibration restraints: restraints<br> Folder with topology and forcefield: toppar</p>
Non-Coordinative Binding of O2 at the Active Center of a Copper-Dependent Enzyme
<p>Data underlying the figures in the publication “Non-Coordinative Binding of O<sub>2</sub> at the Active Center of a Copper-Dependent Enzyme”, published in <em>Angew.Chem. Int. Ed.,</em> <strong>2021</strong>, 60,6154 –6159.</p> <p><a href="https://onlinelibrary.wiley.com/doi/10.1002/anie.202014981">https://onlinelibrary.wiley.com/doi/10.1002/anie.202014981</a></p> <p>Table of contents:</p> <p><strong>1. Dataset</strong>; Zip file containing the data and model validation report of X-ray crystallography diffraction data of complexes in the publication, collected at the swiss light source at 100K. Data processed and refined according to standard procedure.</p>
Genome-wide dMTF-1-binding sites in Drosophila S2 cells in the absence or presence of copper or cadmium
GEO Series GSE40535. Drosophila melanogaster. 3 samples. Type: Genome binding/occupancy profiling by genome tiling array.
Differential roles of copper-binding transcription factors and the subfamilies of the SWI/SNF complex in the transcriptional regulation of the skeletal muscle lineage [RNA-seq]
GEO Series GSE253377. Mus musculus. 24 samples. Type: Expression profiling by high throughput sequencing.
Differential roles of copper-binding transcription factors and the subfamilies of the SWI/SNF complex in the transcriptional regulation of the skeletal muscle lineage [CUT&RUN]
GEO Series GSE253376. Mus musculus. 12 samples. Type: Other.
Differential roles of copper-binding transcription factors and the subfamilies of the SWI/SNF complex in the transcriptional regulation of the skeletal muscle lineage
GEO Series GSE253379. Mus musculus. 36 samples. Type: Other; Expression profiling by high throughput sequencing.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
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DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.