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530 results for “data availability”
Dataset Dental research data availability and quality according to FAIR principles
<p>This dataset contains open access publications in EPMC dental journals from 2016 to 2021 and 500 non-open access dental publications. We evaluated the level of compliance with the FAIR principles. The original dataset and codebook are attached. </p>
Plant root simulator nutrient availability data in the black sand extended growing season experiment, 2018 - 2020.
As a result of climate change, the Rocky Mountain Front Range is experiencing warmer summers and earlier snowmelt. Due to the importance of snow for regulating soil temperature, growing season length, and available moisture in alpine ecosystems, even small shifts in the snow-free period could have large impacts. The focus of the Black Sand Extended Growing Season Length Experiment is to examine how terrain-related differences in climate exposure influence the way alpine habitats respond to climate change via earlier snowmelt. To simulate how climate exposure may affect plant communities, NWT LTER researchers established 5 experimental sites, each containing a pair 10 x 40m rectangular plots. These sites include north and south facing aspects, subalpine and alpine tundra meadows and a range of hydrological conditions (e.g. dry meadows, moist meadows, wet meadows). We accelerated snowmelt in one plot at each site by adding chemically inert black sand, while keeping the second plot as an unmanipulated control; black sand was added to control plots after snow had naturally melted. We used open top warming chambers (OTCs) to increase summer temperature in three subplots within each of the 10 x 40 m plots. This dataset includes plant nutrient availability as measured using plant root simulator probes.
Public Available Data Set of Process Flows from Internal Physical Inspections in the Failure Analysis Laboratory
<p>This data set was generated in accordance with the semiconductor industry and contains data of certain process flows in Failure Analysis (FA) laboratories focusing on the identification and analysis of anomalies or malfunctions in semiconductor devices. It comprises logistic data about the processing steps for the so-called Internal Physical Inspection (IPI).</p><p>A so-called IPI job is given as a sequence of tasks that must be performed to complete the job they belong to. It has an assigned unique ID and timestamps indicating the submission, the end, and the deadline to be met. A job also has an IPI classification assigned to it, providing general guidelines on the operations to be performed.</p><p>Every task within a job has its own type and working time, as well as the assigned resources. There are two main resources involved:</p><p> - the equipment; the machine used to perform the task,</p><p> - the operator; the person who performed the task.</p><p>In addition, general information about the type of the device to be analyzed is also available, such as the given (anonymized) package and basictype. Data also include the number of stressed samples within a device and the samples a task is performed on.</p><p>The dataset includes data from 4 years, specifically from January 2020 to December 2022.</p><p>Finally, the exact column structure is given as follows (python 3.9.5 datatype):</p><ul><li>JOB_ID [int64]: the unique ID of the job</li><li>JOB_SUBMISSION_DATE [object]: the date of the job submission</li><li>JOB_REQ_END_DATE [object]: the required end date (deadline)</li><li>JOB_FINISH_DATE [object]: the actual end date</li><li>JOB_BASICTYPE_H [object]: the given basictype denotation</li><li>JOB_PACKAGE_H [object]: the package denotation of the device</li><li>JSH_QTY_STRESSED [float64]: number of stressed samples</li><li>TASK_SUBMISSION_DATE [object]: the date of the task submission</li><li>TASK_WORKING_TIME [float64]: the amount of time (hours) the task needs to be completed</li><li>TASK_SAMPLE_NO [object]: the samples the task was performed on </li><li>TASK_CEQ_ID [float64]: the ID of the machine used to perform the task</li><li>TASK_CTKS_ID [int64]: the ID representing the task type</li><li>TASK_USR_ID [int64]: the ID of the operator performing the task</li><li>CIPI_LEVEL_0 [object]: a series of IPI classifications, indicating what is required to execute for a specific job</li></ul>
Data from: Spatial distribution of the potential forest biomass availability in Europe
<p>European forests are considered a crucial resource for supplying biomass to a growing bio-economy in Europe. This study aimed to assess the potential availability of forest biomass from European forests and its spatial distribution. We tried to answer the questions (i) how is the potential forest biomass availability spatially distributed across Europe and (ii) where are hotspots of potential forest biomass availability located?</p> <p>The spatial distribution of woody biomass potentials was assessed for 2020 for stemwood, residues (branches and harvest losses) and stumps for 39 European countries. Using the European Forest Information SCENario (EFISCEN) model and international forest statistics, we estimated the theoretical amount of biomass that could be available based on the current and future development of the forest age-structure, growing stock and increment and forest management regimes. We combined these estimates with a set of environmental (site productivity, soil and water protection and biodiversity protection) and technical (recovery rate, soil bearing capacity) constraints, which reduced the amount of woody biomass that could potentially be available. We mapped the potential biomass availability at the level of administrative units and at the 10 km × 10 km grid level to gain insight into the spatial distribution of the woody biomass potentials.</p> <p>According to our results, the total availability of forest biomass ranges between 357 and 551 Tg dry matter per year. The largest potential supply of woody biomass per unit of land can be found in northern Europe (southern Finland and Sweden, Estonia and Latvia), central Europe (Austria, Czech Republic, and southern Germany), Slovenia, southwest France and Portugal. However, large parts of these potentials are already used to produce materials and energy. The distribution of biomass potentials that are currently unused only partially coincides with regions that currently have high levels of wood production.</p> <p>Our study shows how the forest biomass potentials are spatially distributed across the European continent, thereby providing insight into where policies could focus on an increase of the supply of woody biomass from forests. Future research on potential biomass availability from European forests should also consider to what extent forest owners would be willing to mobilise additional biomass from their forests and at what costs the estimated potentials could be mobilised.</p> <p>This dataset contains the data of the map presented in Figure 2A: Estimated spatial distribution of forest biomass availability according to the BASE potential (ton dry matter ha-1 land yr-1) at the grid (10x10 km) level.</p>
Data and code from "Water availability is a stronger driver of soil microbial processing of organic nitrogen than tree species composition"
<p>#### Data description<br> Data from large scale, long-term tree diversity experiment in southwestern France (<a href="https://sites.google.com/view/orpheeexperiment/home">ORPHEE</a>), additionally manipulating water contraint. Variables presented are soil nitrogen cycling rates measured using isotope pool dilutions.</p> <p>Companion paper is found here:</p> <p>Maxwell TL, Augusto L, Tian Y, Wanek W & Fanin N (2023). Water availability is a stronger driver of soil microbial processing of organic nitrogen than tree species composition. <em>European Journal of Soil Science</em>. <a href="https://doi.org/10.1111/ejss.13350">https://doi.org/10.1111/ejss.13350</a></p> <p>#### Metadata<br> Soil sampling: July 2020<br> Maxwell_ShortComm_Data.csv data description</p> <p>ID: unique identifier per sample<br> Block: numbered 1-6. Blocks 1,3,6 are control (unirrigated), Blocks, 2,4,5 are irrigated<br> Plot: numbered plot according to the ORPHEE design. Plot 1 = BP, Plot 5 = PP, Plot 9 = BP_PP<br> Espece: species ID. BP = pure birch (<em>Betula pendula</em>), PP = pure pine (<em>Pinus pinaster</em>), BP_PP (50% mixed birch-pine)<br> Rep: sample replicate, 3 replicates per plot<br> Sample name: long unique identifier per sample. Concatenation of Block, Plot, and Espece<br> PD: gross protein depolymerization rates (micrograms nitrogen per grams dry soil per day = µg N g-1 d-1)<br> AAU: gross free amino acid uptake rates (µg N g-1 d-1)<br> Cmicrobial_ug_g: microbial biomass carbon (µg C g-1)<br> Nmicrobial_ug_g: microbial biomass nitrogen (µg N g-1)<br> MRT_FAA_hrs: mean residence time of free amino acids (hours)<br> FAA_ugN_g: free amino acids (µg N g-1)<br> Moisture_percent: soil moisture percent (%)<br> N_nonfumige_ug_g: nitrogen from non fumigated soils, i.e. extractable N (µg N g-1)<br> C_nonfumige_ug_g: nitrogen from non fumigated soils, i.e. extractableC (µg C g-1)</p>
Data from: Heterogeneity in habitat and nutrient availability facilitate the co-occurrence of N2 fixation and denitrification across wetland - stream - lake ecotones of Lakes Superior and Huron
Great Lakes coastlines are mosaics of wetland, stream, and lake habitats, characterized by a high degree of spatial heterogeneity that may facilitate the co-occurrence of seemingly incompatible biogeochemical processes due to variation in environmental factors that favor each process. We measured nutrient limitation and rates of N2 fixation and denitrification along transects in 5 wetland - stream - lake ecotones with different nutrient loading in Lakes Superior and Huron and hypothesized that rates of both processes would be related to nutrient limitation status, habitat type, and environmental characteristics including temperature, nutrient concentrations, and organic matter quality. This data package includes information on sampling sites, dates and locations; rates of N fixation and denitrification measured at each site, date and transect location; and biomass information from nutrient diffusing substrates deployed on the study transects.
Data and code from "No evidence of sex ratio manipulation by black-throated blue warblers in response to food availability" Kaiser et al. 2023 Behavioral Ecology and Sociobiology
This dataset is published in support of "No evidence of sex ratio manipulation by black-throated blue warblers in response to food availability" by Kaiser et al. 2023 in Behavioral Ecology and Sociobiology. Data and code to test the assumptions and key predictions of the Trivers-Willard hypothesis, which proposes that females produce more sons or daughters depending on food availability, in the black-throated blue warbler at the Hubbard Brook Experimental Forest, NH, 2007-2012. Datasets support analyses of sex ratio bias at both the nest and nestling levels. Data tables support the comparison of the ratio of variances in the scaled pre-fledging mass of male and female nestlings using an F test and reproduction of Figures 2a and 2b. Figures are those used in the published manuscript. Code supports the calculation of offspring sex ratio bias at the population level, and considering separately both low- and high-quality habitats, using the Neuhäuser test, statistical models testing the assumptions of the Trivers-Willard hypothesis, effects of food availability and parental provisioning on offspring sex ratio, and effects of food availability on pre-fledging nestling mass of sons and daughters, and a power analysis to determine the power to detect an effect of food supplementation on sex ratio. These data were gathered as part of the Hubbard Brook Ecosystem Study (HBES). The HBES is a collaborative effort at the Hubbard Brook Experimental Forest, which is operated and maintained by the US Forest Service, Northern Research Station.
Data and code from "Black-throated blue warblers (Setophaga caerulescens) exhibit diet flexibility and track seasonal changes in insect availability" Kaiser et al. 2024 Ecology and Evolution
Changes in leaf phenology from warming spring and autumn temperatures have lengthened the temperate zone growing ‘green’ season and breeding window for migratory birds in North America. However, the fitness benefits of an extended breeding season will depend, in part, on whether species have sufficient dietary flexibility to accommodate seasonal changes in prey availability. We used fecal DNA metabarcoding to test the hypothesis that seasonal changes in the diets of the insectivorous, migratory black-throated blue warbler (Setophaga caerulescens) track changes in the availability of arthropod prey at the Hubbard Brook Experimental Forest, New Hampshire, USA. We examined changes across the breeding season and along an elevation gradient encompassing a two-week difference in green season length. From 98 fecal samples, we identified 395 taxa from 17 arthropod orders; 242 were identified to species, with Cecrita guttivitta (saddled prominent moth), Theridion frondeum (eastern long-legged cobweaver), and Philodromus rufus (white-striped running crab spider) occurring at the highest frequency. We found significant differences in diet composition between survey periods and weak differences among elevation zones. Variance in diet composition was highest late in the season, and diet richness and diversity were highest early in the season. Diet composition was associated with changes in prey availability surveyed over the green season. However, several taxa occurred in diets more or less than expected relative to their frequency of occurrence from survey data, suggesting that prey selection or avoidance sometimes accompanies opportunistic foraging. This study demonstrates that black-throated blue warblers exhibit diet flexibility and track seasonal changes in prey availability, which has implications for migratory bird responses to climate-induced changes in insect communities with longer green seasons. These data were gathered as part of the Hubbard Brook Ecosystem Study (HB
Data for "How Nitrogen and Phosphorus Availability Change Water Use Efficiency in a Mediterranean Savanna Ecosystem"
<p>These are flux and meteorological data for the measurement sites ES-LMa (CT; control treatment), ES-LM1 (NT; nitrogen treatment), and ES-LM2 (nitrogen + phosphorus treatment) for the period from 2014-03-20 to 2020-02-01.</p> <p>These data were used for the manuscript:</p> <p>El-Madany, et al. (2021) "How Nitrogen and Phosphorus Availability Change Water Use Efficiency in a Mediterranean Savanna Ecosystem" submitted to Journal of Geophysical Research - Biogeoscience.</p>
Data availability for "Photolytic Radical Persistence due to Anoxia in 1 Viscous Aerosol Particles"
<p>Data availability for the paper titled "Photolytic Radical Persistence due to Anoxia in 1 Viscous Aerosol Particles" by Peter A. Alpert et al. This repository contains all data tables and files necessary to reproduce plots. Also included are open source ".hdf5” files that contain all data for X-ray microscopy images and ".dat" files having the raw data for mie resonance scattering to derive size change and mass loss. Please see the "Readme.pdf" file for more information.</p>
Data for :Nitrogen availability in digestates from full-scale biogas plants following soil application as affected by operation parameters and input feedstocks
<p>This archive contains data for the paper "Nitrogen availability in digestates from full-scale biogas plants following soil application as affected by operation parameters and input feedstocks". Obtained from a soil incubation experiment for 80 days.</p><p> </p>
Data from: Solar energy resource availability under extreme and historical wildfire smoke conditions
<p>The data in this repository are used to generate the figures in the article "Solar energy resource availability under extreme and historical wildfire smoke conditions" by Corwin et al. (accepted 2024) in <em>Nature Communications</em>. Data are the final processessed and merged datasets sourced from the following publicly available data products:</p> <ul> <li>National Renewable Energy Laboratory’s (NREL) National Solar Radiation Database (NSRDB) (<a href="https://nsrdb.nrel.gov/)">https://nsrdb.nrel.gov/)</a>. <ul> <li>Bulk download in July 2023 via AWS: <a href="https://registry.opendata.aws/nrel-pds-nsrdb/">https://registry.opendata.aws/nrel-pds-nsrdb/</a></li> <li>Variables: modeled irradiance (clear-sky and all-sky direct normal (DNI) and global horizontal (GHI) irradiance, aerosol optical depth, and cloud optical depth</li> </ul> </li> <li>National Oceanic and Atmospheric Administration’s (NOAA) National Environmental Satellite, Data, and Information Service (NESDIS) Hazard Mapping System (HMS) smoke product. <ul> <li>Access: <a href="https://www.ospo.noaa.gov/Products/land/hms.html#maps">https://www.ospo.noaa.gov/Products/land/hms.html#maps</a></li> <li>Variables: smoke plume locations</li> </ul> </li> <li>National Aeronautics and Space Administration's (NASA) Multi-Angle Implementation of Atmospheric Correction (MAIAC) aerosol product (MCD19A2 MODIS/Terra + Aqua land aerosol optical depth daily L2G Global 1km SIN Grid V006). <ul> <li>Access: <a href="https://lpdaac.usgs.gov/products/mcd19a2v006/">https://lpdaac.usgs.gov/products/mcd19a2v006/</a></li> <li>Variables: aerosol optical depth and cloud mask</li> </ul> </li> <li>NASA's Clouds and the Earth’s Radiant Energy System (CERES) cloud data product (SYN1deg-1Hour Edition 4.1) <ul> <li>Access: <a href="https://ceres-tool.larc.nasa.gov/ord-tool/jsp/SYN1degEd41Selection.jsp">https://ceres-tool.larc.nasa.gov/ord-tool/jsp/SYN1degEd41Selection.jsp</a></li> <li>Variables: cloud optical depth</li> </ul> </li> </ul> <p>A detailed description of the data processing methods used to produce the final merged data are available in the article by Corwin et al. </p> <p>Associated code scripts are located in the linked code repository.</p>
Data and code associated with "The Observed Availability of Data and Code in Earth Science and Artificial Intelligence"
<p>Data and code associated with "The Observed Availability of Data and Code in Earth Science <br>and Artificial Intelligence" by Erin A. Jones, Brandon McClung, Hadi Fawad, and Amy McGovern.</p> <p>Instructions: To reproduce figures, download all associated Python and CSV files and place<br> in a single directory.<br> Run BAMS_plot.py as you would run Python code on your system.</p> <p>Code:<br>BAMS_plot.py: Python code for categorizing data availability statements based on given data<br> documented below and creating figures 1-3. </p> <p> Code was originally developed for Python 3.11.7 and run in the Spyder <br> (version 5.4.3) IDE.<br> <br> Libraries utilized:<br> numpy (version 1.26.4) <br> pandas (version 2.1.4)<br> matplotlib (version 3.8.0)<br> <br> For additional documentation, please see code file.</p> <p>Data:<br>ASDC_AIES.csv: CSV file containing relevant availability statement data for Artificial <br> Intelligence for the Earth Systems (AIES)<br>ASDC_AI_in_Geo.csv: CSV file containing relevant availability statement data for Artificial <br> Intelligence in Geosciences (AI in Geo.)<br>ASDC_AIJ.csv: CSV file containing relevant availability statement data for Artificial <br> Intelligence (AIJ)<br>ASDC_MWR.csv: CSV file containing relevant availability statement data for Monthly <br> Weather Review (MWR)<br><br></p> <p><br>Data documentation:<br>All CSV files contain the same format of information for each journal. The CSV files above are <br>needed for the BAMS_plot.py code attached.</p> <p>Records were analyzed based on the criteria below.</p> <p> Records:<br> 1) Title of paper<br> The title of the examined journal article.<br> 2) Article DOI (or URL)<br> A link to the examined journal article. For AIES, AI in Geo., MWR, the DOI is <br> generally given. For AIJ, the URL is given.<br> 3) Journal name<br> The name of the journal where the examined article is published. Either a full<br> journal name (e.g., Monthly Weather Review), or the acronym used in the <br> associated paper (e.g., AIES) is used.<br> 4) Year of publication<br> The year the article was posted online/in print.<br> 5) Is there an ASDC?<br> If the article contains an availability statement in any form, "yes" is <br> recorded. Otherwise, "no" is recorded.<br> 6) Justification for non-open data?<br> If an availability statement contains some justification for why data is not <br> openly available, the justification is summarized and recorded as one of the <br> following options: 1) Dataset too large, 2) Licensing/Proprietary, 3) Can be <br> obtained from other entities, 4) Sensitive information, 5) Available at later <br> date. If the statement indicates any data is not openly available and no <br> justification is provided, or if no statement is provided is provided "None" <br> is recorded. If the statement indicates openly available data or no data <br> produced, "N/A" is recorded.<br> 7) All data available<br> If there is an availability statement and data is produced, "y" is recorded <br> if means to access data associated with the article are given and there is no <br> indication that any data is not openly available; "n" is recorded if no means <br> to access data are given or there is some indication that some or all data is <br> not openly available. If there is no availability statement or no data is <br> produced, the record is left blank.<br> 8) At least some data available<br> If there is an availability statement and data is produced, "y" is recorded <br> if any means to access data associated with the article are given; "n" is <br> recorded if no means to access data are given. If there is no availability <br> statement or no data is produced, the record is left blank.<br> 9) All code available<br> If there is an availability statement and data is produced, "y" is recorded <br> if means to access code associated with the article are given and there is no <br> indication that any code is not openly available; "n" is recorded if no means <br> to access code are given or there is some indication that some or all code is <br> not openly available. If there is no availability statement or no data is <br> produced, the record is left blank.<br> 10) At least some code available<br> If there is an availability statement and data is produced, "y" is recorded <br> if any means to access code associated with the article are given; "n" is <br> recorded if no means to access code are given. If there is no availability <br> statement or no data is produced, the record is left blank.<br> 11) All data available upon request<br> If there is an availability statement indicating data is produced and no data <br> is openly available, "y" is recorded if any data is available upon request to <br> the authors of the examined journal article (not a request to any other <br> entity); "n" is recorded if no data is available upon request to the authors <br> of the examined journal article. If there is no availability statement, any <br> data is openly available, or no data is produced, the record is left blank.<br> 12) At least some data available upon request<br> If there is an availability statement indicating data is produced and not all <br> data is openly available, "y" is recorded if all data is available upon <br> request to the authors of the examined journal article (not a request to any <br> other entity); "n" is recorded if not all data is available upon request to <br> the authors of the examined journal article. If there is no availability <br> statement, all data is openly available, or no data is produced, the record<br> is left blank.<br> 13) no data produced<br> If there is an availability statement that indicates that no data was<br> produced for the examined journal article, "y" is recorded. Otherwise, the<br> record is left blank.<br> 14) links work<br> If the availability statement contains one or more links to a data or code <br> repository, "y" is recorded if all links work; "n" is recorded if one or more <br> links do not work. If there is no availability statement or the statement <br> does not contain any links to a data or code repository, the record is left <br> blank. </p>
Data & R-Code for "Weather and food availability additively affect reproductive output in an expanding raptor population"
<p><strong>Abstract</strong></p> <p>The joint effects of interacting environmental factors on key demographic parameters can exacerbate or mitigate the separate factors’ effects on population dynamics. Given ongoing changes in climate and land use, assessing interactions between weather and food availability on reproductive performance is crucial to understand and forecast population dynamics. By conducting a feeding experiment in 4 years with different weather conditions, we were able to disentangle the effects of weather, food availability and their interactions on reproductive parameters in an expanding population of the red kite (<em>Milvus milvus</em>), a conservation-relevant raptor known to be supported by anthropogenic feeding. Brood loss occurred mainly during the incubation phase, and was associated with rainfall and low food availability. In contrast, brood loss during the nestling phase occurred mostly due to low temperatures. Survival of last-hatched nestlings and nestling development was enhanced by food supplementation and reduced by adverse weather conditions. However, we found no support for interactive effects of weather and food availability, suggesting that these factors affect reproduction of red kites additively. The results not only suggest that food-weather interactions are prevented by parental life-history trade-offs, but that food availability and weather conditions are crucial separate determinants of reproductive output, and thus population productivity. Overall, our results suggest that the observed increase in spring temperatures and enhanced anthropogenic food resources have contributed to the elevational expansion and the growth of the study population during the last decades.</p>
Code and Data Availability
<p>To help the public easily understand my research work, I update the code of Spatially Explicit Individual Based-Dynamic Global Vegetation Model (SEIB-DGVM) Version 3.02, the resonstructed CO2 dataset from 1901 to 2015, MOD17A3, and MCD12C1 data. These data are the final files used in my work.</p>
How much data about the data centres' energy footprint is currently available globally?
<p><strong>By scraping the open database "Datacenter.rs", the candidate analysed and mapped more than 6.000 data centres worldwide on April 9, 2022.</strong></p>
Data Echoes: Tracking Data Availability and Integrity in Software Engineering Research
<p><strong>This is the dataset of the report: Data Echoes: Tracking Data Availability and Integrity in Software Engineering Research</strong></p> <p>It contains the following information of all the papers from ASE, FSE, and ICSE in 2023:</p> <ul> <li>Paper title</li> <li>Keyword</li> <li>Is the source data available and accessible in the paper?</li> <li>If the source data is not available, do the authors explain why?</li> <li>Hosting platforms</li> <li>Access mode</li> <li>License</li> <li>Is their experiment data reused from previous work, or newly generated specifically for this study, or combination of both? </li> <li>Do the authors change/modify their experiment data before experiment?</li> <li>What modifications do they perform?</li> <li>Does the link provide detailed instructions about how to replicate their paper?</li> <li>Does the link contains their complete experiment data, their source code or other materials that are necessary to replicate their experiments?</li> <li>What's the data format inside the link?</li> <li>What's the content of the link?</li> </ul> <p> </p> <p>This is a course project and I collect the data in a rush.</p> <p>If you want to use this dataset and find any error, please contact me ;-)</p> <p>My email: echo.xiangchen@gmail.com</p>
King Louie: DBMS Availability Evaluation Data Sets
<p>These data sets provide all availability measurements as accompanying material for the research paper <strong><em>King</em> </strong><em><strong>Louie: Reproducible Availability Benchmarking of Cloud-hosted DBMS</strong> </em>that is presented in the 35th ACM/SIGAPP Symposium on Applied Computing (SAC ’20), March 30-April 3, 2020, Brno, Czech Republic.</p> <p> </p> <p> </p>
Research data from the survey on Smart Cities professional profiles for the Article "Modelling and analyzing the availability of technical professional profiles for the success of Smart Cities projects in Europe"
<p>The file includes the complete version of data collected through the surrvey on recommended profile for two professional roles in the context of Smart Cities (SC) projects: SC engineer and SC technician. It complements the previous version focused on IoT implementation stired at <a href="../doi/10.5281/zenodo.7492254">https://zenodo.org/doi/10.5281/zenodo.7492254</a></p>
Data and Code open availability for the FRETsael paper
<p>This dataset includes the raw files of the measurements of Actin-Myosin interactions in SH-SY5Y cells, as well as the Matlab code for the simulations and analyses used in the paper about FRETsael: "<strong>FRET-sensitized acceptor emission localization (FRETsael) – nanometer localization of biomolecular interactions using fluorescence lifetime imaging</strong>"</p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.