Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
10
datasets available to search
ShareScore release 0.9.0
Dataset results
10 results for “desert stream”
Indirect impacts of a novel wildfire on a well-studied desert stream: connectivity, carbon, and communities
In 2020 the Bush Fire burned approximately half of the Sycamore Creek watershed in central Arizona. Sycamore Creek has been subject to >40 years of research and the stream has been monitored by NEON since 2017. We studied the effects of fire on biogeochemistry of the stream and its watershed. We deployed autosamplers to monitor stream chemistry during storms on the mainstem and in ephemeral tributaries draining burned and unburned watersheds. The storm sampling program commenced nearly a year following the fire because absence of summer monsoon or winter storms in 2020-21 resulted in no flow in tributaries and intermittent flow in the mainstem. Water chemistry was measured during 14 monsoon storms of 2021 and winter frontal storms of 2021-22 with samples of baseflow collected in the mainstem during intervening periods. Water samples were analyzed for dissolved organic carbon, nitrogen, phosphorus, and major anions and cations. We also measured nutrient content of ash and chemistry of ash leachate as a potential source of solutes to stream biota.
Food-chain length in desert streams of central and southern Arizona, USA
## overview Food chain length (FCL) is a key measure of the vertical structure of food webs that determines energy flow through ecosystems, carbon exchange between freshwater ecosystems and the atmosphere, and rates of nutrient cycling. FCL also has a strong bearing on the biomass of green plants in ecosystems and hence on water quality in aquatic ecosystems. Broad-scale syntheses of controls on FCL in stream ecosystems indicate that FCL declines with discharge variation but, counter to theory, does not vary significantly with energy supply. The mechanisms linking discharge and energy to FCL are largely unresolved in streams. We propose that lack of a relationship between energy supply and FCL may be due to variation in efficiency of energy transfer caused by constraints of food quality, or to a temporal mismatch between measures of energy inputs and FCL. Alternatively, the effects of flow variation on FCL may simply be paramount to energy supply, but potential mechanisms linking flow to FCL remain untested. Regime shifts—punctuated change between strings of high- and low-flow events—may cause comprehensive faunal replacement across trophic levels and collapse of the vertical structure of food webs. FCL may change as a result of loss (or gain) of an apex predator, or as a result of changes in feeding relationships leading to apex predators that eat higher on the food chain. Finally, flow variation may indirectly influence FCL through inputs of limiting nutrients during floods. In desert streams, algae typically provide the primary source of energy, and algal production is limited by nitrogen (N). N loading from terrestrial ecosystems is strongly related to flow variation, particularly to the inter-flood interval (IFI) or duration of baseflow between floods. Long IFI leads to larger N pulses and potentially greater net ecosystem production (NEP), thereby providing an indirect effect of flow variation on FCL. Specific aims of the research include: 1) Quantify the effe
The role of moss as integrators of soil and stream nutrient status in deserts, Greater Phoenix area, Arizona, 2011 to 2013
In deserts, moss may play an important role connecting soil and stream nutrient cycling, where stream nutrients may be taken up by moss growing at the terrestrial-aquatic interface, which may be windblown into the surrounding soil to become an organic matter source in the soil. Despite its importance, very little is known about moss’s role in biogeochemical cycles and how nutrient pulses (e.g., from N deposition in air pollution) will affect their functional significance as an integrator of nutrient cycling in deserts. To understand their functional significance, we sampled moss and soil to determine (1) the plasticity of moss stoichiometry in relation to the nutrient content of the soil nutrient source; and (2) if moss stoichiometry covaries over natural environmental nutrient gradients (e.g. differing native soil content).
Flashiness of urban and desert streams in arid Arizona watersheds (2003-2016)
There is general consensus that urbanization results in dramatic changes in stream hydrology, such as higher peak flows and increased flashiness (the rate at which water levels rise and fall). However, this has not been thoroughly assessed for aridlands, which are characterized by these very same hydrograph properties. This study analyzed streamflow records from 19 watersheds of central Arizona, USA to determine how hydrograph characteristics varied with urban development. This study evaluated influences on streamflow regime metrics calculated from daily and sub-daily flow data using linear mixed effects models, which factored in imperviousness along with other watershed characteristics. Results indicate that flashiness, coefficient of variation, zero flow days, and hydrograph rise and fall rates decreased with extent of imperviousness, which is the opposite pattern to that observed in previous studies predominately in humid regions. Engineered retention basins are one explanation for this observation, though novel urban sources of dry weather flows are likely also playing a role. This study also identified strong relationships between these hydrologic metrics and mean area-weighted discharge, watershed area, and annual precipitation. As in more humid systems, more high flow events in the urban desert streams compared to non-urban desert streams were observed. However, this was only at the lower flood threshold, and there was not an increase in larger floods with urban development. Overall, the urban stream syndrome manifests differently in this arid system: urbanization increases water retention and leads to less variable flows in stream ecosystems. Data and analysis code are included with this data set.
Data from: Demography predicts genetic effective size in a desert stream fish community
<p>Demographic data collected during long-term diversity monitoring and short-term ecological surveys were used to calculate summary statistics to compare with estimates of genetic effective size for nine species occurring in the Gila River, New Mexico, USA. Diversity survey data collected by New Mexico Department of Game and Fish from 1988 to 2010 were converted to presence/absence data to create detection histories for each of the nine focal species. Simple occupancy models of detection histories implemented using program PRESENCE were used to estimate the annual probability of sites becoming extirpated. A second data source from affiliated short-term ecological studies provided numbers of individuals captured and area sampled and was used to estimate mean density of adult individuals across sample sites. These data were also used to calculated an index of commonness that incorporates both relative abundance and study wide occupancy. Microsatellite genotypes from a previous study and Dryad submission were used to estimate effective number of breeders and genetic effective size (estimates included in this submission) for each species and contemporary migration rates. Migration rates were estimated using the Bayesian assignment model implemented in program BIMr. Outputs from all independent model runs and code to process output files are included with this data submission.</p>
Data from: Demography predicts genetic effective size in a desert stream fish community
Open the record for dataset details and reuse information.
Dissolved organic carbon dynamics in an urban desert stream ecosystem in central Arizona-Phoenix
Variation in stream chemistry is a function of the strength of terrestrial-aquatic linkages, the extent to which surface and groundwater exchanges, and the rate of instream biotic processes. The importance of these variables may fluctuate as a function of climate regime, catchment geomorphology, or level of human impact. A mechanistic understanding of the influence of each of these variables on ecosystem functioning will increase understanding of the role of streams in global nutrient and carbon cycles. Of particular interest is dissolved organic carbon (DOC), an important source of carbon and energy for microbial processes. Respiration by heterotrophic bacterial communities has recently been linked to the quality (ability of microbes to utilize C source) of the DOC pool in streams. DOC not only influences stream nutrient supply, but also the transport of contaminants and the attenuation of UV radiation. This dissertation focused on DOC delivery to two arid-land stream ecosystems, one native desert (Sycamore Creek, AZ), and one urban (Phoenix, AZ). The overall objectives of this work were to (1) document patterns in DOC quantity and chemical composition in response to flooding and groundwater exchange, (2) generate and test hypotheses explaining variation in DOC quantity and quality and (3) relate this variation to microbial activity. In the native desert stream ecosystem, the climate regime influenced seasonal variation in the quantity and quality of DOC inputs, with higher complexity and higher concentrations of DOC in summer monsoonal runoff. In contrast, human alteration of geomorphology and hydrologic flowpaths in the Phoenix metropolitan area significantly influenced streamwater chemistry in comparison to low-impact streams in the Sonoran Desert. In the city, mechanisms of nutrient retention and transformation were often shifted from dominance by biotic to abiotic ones, severely dampening the influence of climate regime and substituting instead the maintenance
Data from: Stream hierarchy defines riverscape genetics of a North American desert fish
Global climate change is apparent within the Arctic and the south-western deserts of North America, with record drought in the latter reflected within 640 000 km2 of the Colorado River Basin. To discern the manner by which natural and anthropogenic drivers have compressed Basin-wide fish biodiversity, and to establish a baseline for future climate effects, the Stream Hierarchy Model (SHM) was employed to juxtapose fluvial topography against molecular diversities of 1092 Bluehead Sucker (Catostomus discobolus). MtDNA revealed three geomorphically defined evolutionarily significant units (ESUs): Bonneville Basin, upper Little Colorado River and the remaining Colorado River Basin. Microsatellite analyses (16 loci) reinforced distinctiveness of the Bonneville Basin and upper Little Colorado River, but subdivided the Colorado River Basin into seven management units (MUs). One represents a cline of three admixed gene pools comprising the mainstem and its lower-gradient tributaries. Six others are not only distinct genetically but also demographically (i.e. migrants/generation <9.7%). Two of these (i.e. Grand Canyon and Canyon de Chelly) are defined by geomorphology, two others (i.e. Fremont-Muddy and San Raphael rivers) are isolated by sharp declivities as they drop precipitously from the west slope into the mainstem Colorado/Green rivers, another represents an isolated impoundment (i.e. Ringdahl Reservoir), while the last corresponds to a recognized subspecies (i.e. Zuni River, NM). Historical legacies of endemic fishes (ESUs) and their evolutionary potential (MUs) are clearly represented in our data, yet their arbiter will be the unrelenting natural and anthropogenic water depletions that will precipitate yet another conservation conflict within this unique but arid region.
Data from: Stream hierarchy defines riverscape genetics of a North American desert fish
Open the record for dataset details and reuse information.
Dissolved organic carbon dynamics in an urban desert stream ecosystem in central Arizona-Phoenix: site locations
Variation in stream chemistry is a function of the strength of terrestrial-aquatic linkages, the extent to which surface and groundwater exchanges, and the rate of instream biotic processes. The importance of these variables may fluctuate as a function of climate regime, catchment geomorphology, or level of human impact. A mechanistic understanding of the influence of each of these variables on ecosystem functioning will increase understanding of the role of streams in global nutrient and carbon cycles. Of particular interest is dissolved organic carbon (DOC), an important source of carbon and energy for microbial processes. Respiration by heterotrophic bacterial communities has recently been linked to the quality (ability of microbes to utilize C source) of the DOC pool in streams. DOC not only influences stream nutrient supply, but also the transport of contaminants and the attenuation of UV radiation. This dissertation focused on DOC delivery to two arid-land stream ecosystems, one native desert (Sycamore Creek, AZ), and one urban (Phoenix, AZ). The overall objectives of this work were to (1) document patterns in DOC quantity and chemical composition in response to flooding and groundwater exchange, (2) generate and test hypotheses explaining variation in DOC quantity and quality and (3) relate this variation to microbial activity. In the native desert stream ecosystem, the climate regime influenced seasonal variation in the quantity and quality of DOC inputs, with higher complexity and higher concentrations of DOC in summer monsoonal runoff. In contrast, human alteration of geomorphology and hydrologic flowpaths in the Phoenix metropolitan area significantly influenced streamwater chemistry in comparison to low-impact streams in the Sonoran Desert. In the city, mechanisms of nutrient retention and transformation were often shifted from dominance by biotic to abiotic ones, severely dampening the influence of climate regime and substituting instead the maintenance
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.