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19 results for “digital research infrastructure”

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zenodo48/100

UKRI Digital Research Infrastructure Mapping Survey Dataset (for Net Zero Scoping Project)

<p>This dataset was generated as an output for the DRI Mapping exercise carried out during&nbsp;the UKRI Net Zero Digital Research Infrastructure (DRI) Scoping Project undertaken from&nbsp;2021-2023. The &quot;README.md&quot; provides more information about the dataset and how to use it.</p> <p>The report associated with this dataset is available at:</p> <p>https://doi.org/10.5281/zenodo.7805987</p>

opencc-by-4.0Apr 2023View details →
zenodo28/100

Towards big religious data, RESILIENCE Research Infrastructure for Data on Religion in the Digital Age

<p>Data in and for religion is arguably as old as humanity. Religious significance has been attached to an immense variety of artifacts and documents, often in written form, in nearly all spoken and written languages over the past millennia. The rise of the digital age gives to the scholar in religious studies the opportunity to build research over a much wider array of data than ever before; institutions which have data repositories (such as libraries, museums, universities, etc.) similarly have the chance to make their collections available to a larger community. On the other hand, however, there is a serious risk that a considerable amount of data gets lost during the &quot;Digital transition&quot;. This paper presents the approach of the RESILIENCE Research Infrastructure in dealing with the issue of big data and data loss within the field of religious studies.</p>

opencc-by-4.0Oct 2020View details →
zenodo28/100

How digital infrastructures empower humanities researcher(s): The PARTHENOS Training Suite

<p>1<sup>st</sup> Project Presentation</p>

opencc-by-4.0Jul 2017View details →
zenodo28/100

FAIR Digital Object and DiSSCo Research Infrastructure Design

<p>This presentation is about how <a href="https://dissco.eu">DiSSCo</a>&nbsp;(Distributed System of Scientific Collections) is using the FAIR Digital Object as the cornerstone of a research infrastructure design. DiSSCo -- a new Research Infrastructure currently in the preparation phase -- will digitally unify European natural science assets under common curation and access and will ensure that data is Findable, Accessible, Interoperable and Reusable (FAIR). DiSSCo will integrate a fragmented landscape of natural science collections, transforming it into a unified, robust, quality ensured knowledge base of unprecedented scale for bio- and geodiversity.</p> <p>With a brief historical context of FAIR Digital Object, this presentation introduces the concept of Digital Specimen. Then it highlights the incorporation of outputs from several <a href="https://rd-alliance.org/">RDA</a> (Research Data Alliance)&nbsp;interests and working groups in the design decision.</p>

opencc-by-4.0Dec 2020View details →
zenodo28/100

Figure 1 from: Conte M, Flynn AJ, Barrison P, Boisvert P, Landis-Lewis Z, Friedman C (2023) Digital objects to make computable biomedical knowledge FAIR: an infrastructural approach to knowledge representation, dissemination and implementation. Research Ideas and Outcomes 9: e109307. https://doi.org/10.3897/rio.9.e109307

Figure 1 Conceptual model of a Knowledge Object (KO) containing a payload, machine-actionable service and deployment specifications, metadata and a unique persistent identifier. We are exploring aligning our conceptual model with emerging best practices for FAIR Digital Objects. Derived from Wittenburg et al's Digital Objects as Drivers towards Convergence in Data Infrastructures (Wittenburg et al. 2019).

opencc-by-4.0Dec 2023View details →
zenodo28/100

Figure 3 from: Conte M, Flynn AJ, Barrison P, Boisvert P, Landis-Lewis Z, Friedman C (2023) Digital objects to make computable biomedical knowledge FAIR: an infrastructural approach to knowledge representation, dissemination and implementation. Research Ideas and Outcomes 9: e109307. https://doi.org/10.3897/rio.9.e109307

Figure 3 This figure illustrates the dual nature of Knowledge Objects: knowledge-as-resource and knowledge-as-service. A KO can be curated and maintained in a repository, pass metadata to a knowledge graph or deployed into applications. Different to other digital objects, the methods to deploy the KO to applications via custom or generic runtimes called by microservices are built into the KO.

opencc-by-4.0Dec 2023View details →
zenodo28/100

Figure 2 from: Conte M, Flynn AJ, Barrison P, Boisvert P, Landis-Lewis Z, Friedman C (2023) Digital objects to make computable biomedical knowledge FAIR: an infrastructural approach to knowledge representation, dissemination and implementation. Research Ideas and Outcomes 9: e109307. https://doi.org/10.3897/rio.9.e109307

Figure 2 (L) Sample KO as viewed from the KGrid Library, from which the KO can be implemented in a hosted runtime environment or downloaded. (R) Sample output results from deploying the KO.

opencc-by-4.0Dec 2023View details →
zenodo24/100

Figure 9 from: Hardisty A, Saarenmaa H, Casino A, Dillen M, Gödderz K, Groom Q, Hardy H, Koureas D, Nieva de la Hidalga A, Paul DL, Runnel V, Vermeersch X, van Walsum M, Willemse L (2020) Conceptual design blueprint for the DiSSCo digitization infrastructure - DELIVERABLE D8.1. Research Ideas and Outcomes 6: e54280. https://doi.org/10.3897/rio.6.e54280

Figure 9 Funding sources as they correspond to the different development phases of the DiSSCo RI.

opencc-by-4.0May 2020View details →
zenodo24/100

Figure 8 from: Hardisty A, Saarenmaa H, Casino A, Dillen M, Gödderz K, Groom Q, Hardy H, Koureas D, Nieva de la Hidalga A, Paul DL, Runnel V, Vermeersch X, van Walsum M, Willemse L (2020) Conceptual design blueprint for the DiSSCo digitization infrastructure - DELIVERABLE D8.1. Research Ideas and Outcomes 6: e54280. https://doi.org/10.3897/rio.6.e54280

Figure 8 DiSSCo Programme of linked projects.

opencc-by-4.0May 2020View details →
zenodo24/100

Figure 6 from: Hardisty A, Saarenmaa H, Casino A, Dillen M, Gödderz K, Groom Q, Hardy H, Koureas D, Nieva de la Hidalga A, Paul DL, Runnel V, Vermeersch X, van Walsum M, Willemse L (2020) Conceptual design blueprint for the DiSSCo digitization infrastructure - DELIVERABLE D8.1. Research Ideas and Outcomes 6: e54280. https://doi.org/10.3897/rio.6.e54280

Figure 6 Some uses of natural science collections in formal and informal education.

opencc-by-4.0May 2020View details →
zenodo24/100

Figure 7 from: Hardisty A, Saarenmaa H, Casino A, Dillen M, Gödderz K, Groom Q, Hardy H, Koureas D, Nieva de la Hidalga A, Paul DL, Runnel V, Vermeersch X, van Walsum M, Willemse L (2020) Conceptual design blueprint for the DiSSCo digitization infrastructure - DELIVERABLE D8.1. Research Ideas and Outcomes 6: e54280. https://doi.org/10.3897/rio.6.e54280

Figure 7 Governance and management models during the different programme phases.

opencc-by-4.0May 2020View details →
zenodo24/100

Figure 5 from: Hardisty A, Saarenmaa H, Casino A, Dillen M, Gödderz K, Groom Q, Hardy H, Koureas D, Nieva de la Hidalga A, Paul DL, Runnel V, Vermeersch X, van Walsum M, Willemse L (2020) Conceptual design blueprint for the DiSSCo digitization infrastructure - DELIVERABLE D8.1. Research Ideas and Outcomes 6: e54280. https://doi.org/10.3897/rio.6.e54280

Figure 5 An example matrix (QR) code encoding information about a specimen.

opencc-by-4.0May 2020View details →
zenodo24/100

Figure 3 from: Hardisty A, Saarenmaa H, Casino A, Dillen M, Gödderz K, Groom Q, Hardy H, Koureas D, Nieva de la Hidalga A, Paul DL, Runnel V, Vermeersch X, van Walsum M, Willemse L (2020) Conceptual design blueprint for the DiSSCo digitization infrastructure - DELIVERABLE D8.1. Research Ideas and Outcomes 6: e54280. https://doi.org/10.3897/rio.6.e54280

Figure 3 From Hub platform to APIs, data lifecycle and system design.

opencc-by-4.0May 2020View details →
zenodo24/100

Figure 4 from: Hardisty A, Saarenmaa H, Casino A, Dillen M, Gödderz K, Groom Q, Hardy H, Koureas D, Nieva de la Hidalga A, Paul DL, Runnel V, Vermeersch X, van Walsum M, Willemse L (2020) Conceptual design blueprint for the DiSSCo digitization infrastructure - DELIVERABLE D8.1. Research Ideas and Outcomes 6: e54280. https://doi.org/10.3897/rio.6.e54280

Figure 4 Illustrative system design based on multiple CORDRA object repository instances.

opencc-by-4.0May 2020View details →
zenodo24/100

Figure 12 from: Hardisty A, Saarenmaa H, Casino A, Dillen M, Gödderz K, Groom Q, Hardy H, Koureas D, Nieva de la Hidalga A, Paul DL, Runnel V, Vermeersch X, van Walsum M, Willemse L (2020) Conceptual design blueprint for the DiSSCo digitization infrastructure - DELIVERABLE D8.1. Research Ideas and Outcomes 6: e54280. https://doi.org/10.3897/rio.6.e54280

Figure 12 Introducing a funding thematic coordination layer between national facilities and RIs.

opencc-by-4.0May 2020View details →
zenodo24/100

Figure 10 from: Hardisty A, Saarenmaa H, Casino A, Dillen M, Gödderz K, Groom Q, Hardy H, Koureas D, Nieva de la Hidalga A, Paul DL, Runnel V, Vermeersch X, van Walsum M, Willemse L (2020) Conceptual design blueprint for the DiSSCo digitization infrastructure - DELIVERABLE D8.1. Research Ideas and Outcomes 6: e54280. https://doi.org/10.3897/rio.6.e54280

Figure 10 Illustrating the direct funding model for RIs. Arrows depict funding flows.

opencc-by-4.0May 2020View details →
zenodo24/100

Figure 11 from: Hardisty A, Saarenmaa H, Casino A, Dillen M, Gödderz K, Groom Q, Hardy H, Koureas D, Nieva de la Hidalga A, Paul DL, Runnel V, Vermeersch X, van Walsum M, Willemse L (2020) Conceptual design blueprint for the DiSSCo digitization infrastructure - DELIVERABLE D8.1. Research Ideas and Outcomes 6: e54280. https://doi.org/10.3897/rio.6.e54280

Figure 11 SWOT analysis of the direct funding model for RIs.

opencc-by-4.0May 2020View details →
zenodo24/100

Figure 2 from: Hardisty A, Saarenmaa H, Casino A, Dillen M, Gödderz K, Groom Q, Hardy H, Koureas D, Nieva de la Hidalga A, Paul DL, Runnel V, Vermeersch X, van Walsum M, Willemse L (2020) Conceptual design blueprint for the DiSSCo digitization infrastructure - DELIVERABLE D8.1. Research Ideas and Outcomes 6: e54280. https://doi.org/10.3897/rio.6.e54280

Figure 2 The DiSSCo Hub data platform.

opencc-by-4.0May 2020View details →
zenodo24/100

Figure 1 from: Hardisty A, Saarenmaa H, Casino A, Dillen M, Gödderz K, Groom Q, Hardy H, Koureas D, Nieva de la Hidalga A, Paul DL, Runnel V, Vermeersch X, van Walsum M, Willemse L (2020) Conceptual design blueprint for the DiSSCo digitization infrastructure - DELIVERABLE D8.1. Research Ideas and Outcomes 6: e54280. https://doi.org/10.3897/rio.6.e54280

Figure 1 Multiple factors balance to achieve goals.

opencc-by-4.0May 2020View details →

ScienceDex guides

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record