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7 results for “direct and indirect pathway”
Data Repository - Distinct Roles of Direct and Indirect Electrification in Pathways to a Renewables-dominated European Energy System
<p>This is the data repository to reproduce the scenario analysis of the paper "<a href="https://www.cell.com/one-earth/fulltext/S2590-3322(24)00037-X?_returnURL=https%3A%2F%2Flinkinghub.elsevier.com%2Fretrieve%2Fpii%2FS259033222400037X%3Fshowall%3Dtrue">Distinct roles of direct and indirect electrification in pathways to a renewables-dominated European energy system</a>".</p> <p>The source code for the REMIND version used in this study is available at <a href="https://github.com/fschreyer/remind/tree/ElecH2_prod">https://github.com/fschreyer/remind/tree/ElecH2_prod</a>. The scenario config file that was used to start the specific model runs of the paper and that inlucdes all scenario-specific model settings can be found in the repository under <a href="https://github.com/fschreyer/remind/blob/ElecH2_prod/config/21_regions_EU11/scenario_config_ElecH2.csv">./config/21_regions_EU11/scenario_config_ElecH2.csv</a>. The repository is a fork with slight changes relative to the main release version available at <a href="https://github.com/remindmodel/remind/tree/v3.2.1">https://github.com/remindmodel/remind/tree/v3.2.1</a> and <a href="https://doi.org/10.5281/zenodo.7852740">https://doi.org/10.5281/zenodo.7852740</a>. The model documentation can be found at <a href="https://rse.pik-potsdam.de/doc/remind/3.2.0">https://rse.pik-potsdam.de/doc/remind/3.2.0</a>. </p> <p>Model output data as well as other data that were used in the study are stored in data.zip. Moreover, we added a PlotsData.zip file, which contains the data shown in the figures of the paper. The R script to produce the figures and analysis of the paper can be found in ElecH2paper_Plots.Rmd. We publish a comprehensive dataset of our model output which includes more data than what is needed to reproduce the figures of the paper. Those data can be helpful to compare and contextualize our scenarios or use them for further analyses. However, due to the scope and complexity of our modeling framework, these data need to be used with care. The data used for the analysis of this study have been thoroughly validated. However, we cannot always perform such validation for the whole dataset and data need to treated with caution in particular at high regional or sectoral resolution and with respect to aspects that were not in the focus of the study as there maybe artefacts or limitations of our modeling approach. Please contact us in case you would like to use our scenarios for further analyses. We welcome open and constructive exchange on our data. </p> <p> </p> <p>Contact:<br>Felix Schreyer<br>Potsdam Institute for Climate Impact Research<br>felix.schreyer@pik-potsdam.de</p>
Grazing changes the direction of direct effect of shrubs on nematode communities but suppresses indirect effects through microbial pathways
<p>It is well established that dominant plants shape belowground communities, which in turn influence ecosystem functioning. Similarly, herbivores affect belowground communities through physical disturbance and redistribution of organic inputs, but also through their interactions with the plants themselves. However, we know little about how grazing moderates effects of dominant plants on belowground organisms. We established a three-year removal experiment in a grazed and an ungrazed alpine meadow on the Qinghai-Tibet plateau to explore how grazing mediates the effects of the dominant shrub, <em>Dosiphora fruticosa</em>, on nematode communities. We applied structural equation modelling to assess how grazing moderates the effects of <em>D. fruticosa</em> on nematode communities both directly and indirectly via changes in soil physicochemical properties<span>, root biomass and microbial communities</span>. We found that 1) grazing changed the direction of the direct effect of shrub on nematode communities as indicated by the shift from a negative to a positive path coefficient; 2) shrub affected nematode richness mainly through microbial richness. Accordingly, nematode community composition was more closely related to microbial community composition in the ungrazed alpine meadow, while edaphic properties were stronger predictors of nematode community composition responses to shrubs in the grazed meadow; and 3) grazing suppressed the indirect effects of shrub on nematode communities via microbial communities. Our study shows that grazing plays an important role in regulating dominant plant's effects on belowground community composition and interactions in alpine meadows.</p>
Grazing changes the direction of direct effect of shrubs on nematode communities but suppresses indirect effects through microbial pathways
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vanBeest iScience 2024: The direct and indirect pathways of the basal ganglia antagonistically influence cortical activity and perceptual decisions.
<p>Data for the paper 'The direct and indirect pathways of the basal ganglia antagonistically influence cortical activity and perceptual decisions.' by van Beest et al. 2024, iScience: https://doi.org/10.1016/j.isci.2024.110753</p> <p>Code to analyze data is available via https://github.com/EnnyvanBeest/vanBeest_iScience2024.</p> <p> </p> <p> </p>
Data from: Habitat, predators, and hosts regulate disease in Daphnia through direct and indirect pathways
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Data from: Distinct roles of striatal direct and indirect pathways in value-based decision making
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Translational profiling reveals novel gene expression changes in the direct and indirect pathways in a mouse model of Levodopa induced dyskinesia
GEO Series GSE291024. Mus musculus. 23 samples. Type: Expression profiling by array.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.