Skip to main content
Powered by ShareScore

Find research datasets worth reusing

Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.

122

datasets available to search

ShareScore release 0.9.0

Reset

Dataset results

122 results for “dispersal limitation”

Learn how ShareScore rates datasets ↗
dryad40/100

Data from: Forest degradation limits the complementarity and quality of animal seed dispersal

<p><span>Forest degradation changes the structural heterogeneity of forests and species communities, with potential consequences for ecosystem functions including seed dispersal by frugivorous animals. While the quantity of seed dispersal may be robust towards forest degradation, changes in the effectiveness of seed dispersal through qualitative changes are poorly understood. Here, we carried out extensive field sampling on the structure of forest microhabitats, seed deposition sites, and plant recruitment along three characteristics of forest microhabitats (canopy cover, ground vegetation, deadwood) in Europe's last lowland primeval forest (Białowieża, Poland). We then applied niche modelling to study forest degradation effects on multi-dimensional seed deposition by frugivores and recruitment of fleshy-fruited plants. Forest degradation was shown to (1) reduce the niche volume of forest microhabitat characteristics by half, (2) homogenize the spatial seed deposition within and among frugivore species, and (3) limit the regeneration of plants via changes in seed deposition and recruitment. Our study shows that the loss of frugivores in degraded forests is accompanied by a reduction in the complementarity and quality of seed dispersal by remaining frugivores. In contrast, structure-rich habitats, such as old-growth forests, safeguard the diversity of species interactions, forming the basis for high-quality ecosystem functions.</span></p>

opencc-zeroMay 2022View details →
dryad40/100

To disperse or compete? Coevolution of traits leads to a limited number of reproductive strategies

<p><span><span>Reproductive strategies are defined by a combination of behavioural, morphological, and life-history traits. Reproductive investment and offspring propagule size are two key traits defining reproductive strategies. While a substantial amount of work has been devoted to understanding the independent fitness effects of each of these traits, it remains unclear how coevolution between them ultimately affects the evolution of reproductive strategies, and how this might influence the relationship between dispersal and environmental factors. In this study, we explore how the evolution of reproductive strategies defined by these two coevolving traits is influenced by resource availability and spatial structuring of the environment using a simulation model. We find three possible equilibrium strategies across all scenarios: a competitor strategy with high reproductive investment (producing large propagules which disperse short distances), and two coloniser strategies differing in reproductive investment (both producing small propagules which disperse long distances). The possible equilibrium strategies for each scenario depended on starting conditions, spatial structure and resource availability. Evolutionary transitions between these equilibrium strategies were more likely in heterogeneous than homogeneous landscapes and at higher resource levels. Transition from coloniser strategy to competitor strategy was usually a two-step process, with changes in propagule size following initial evolution in investment. This highlights how the interaction between the two trait axes affects the evolution of reproductive strategies, particularly where fitness valleys preclude the simultaneous evolution of traits. Our results highlight the need to incorporate trait coevolution into evolutionary models to help develop a more integrative understanding of the structure of natural populations and how the interaction between traits constrains or hinders evolutionary processes.</span></span></p>

opencc-zeroMay 2023View details →
dryad40/100

To disperse or compete? Coevolution of traits leads to a limited number of reproductive strategies

Open the record for dataset details and reuse information.

publicMay 2023View details →
dryad40/100

Data from: Dispersal limits poleward expansion of mangroves on the west coast of North America

Open the record for dataset details and reuse information.

publicJul 2024View details →
dryad40/100

Data from: Forest degradation limits the complementarity and quality of animal seed dispersal

Open the record for dataset details and reuse information.

publicMay 2022View details →
dryad36/100

Mate-finding dispersal reduces local mate limitation and sex bias in dispersal

<p>1. Sex-biased dispersal (SBD) often skews the local sex ratio in a population. This can result in a shortage of mates for individuals of the less-dispersive sex. Such mate limitation can lead to Allee effects in populations that are small or undergoing range expansion, consequently affecting their survival, growth, stability and invasion speed.</p> <p>2. Theory predicts that mate shortage can lead to either an increase or a decrease in the dispersal of the less-dispersive sex. However, neither of these predictions have been empirically validated.</p> <p>3. To investigate how SBD-induced mate limitation affects dispersal of the less-dispersive sex, we used Drosophila melanogaster populations with varying dispersal propensities. To rule out any mate-independent density effects, we examined the behavioral plasticity of dispersal in presence of mates as well as same-sex individuals with differential dispersal capabilities.</p> <p>4. In the presence of high-dispersive mates, the dispersal of both male and female individuals was significantly increased. However, the magnitude of this increase was much larger in males than in females, indicating that the former show greater mate-finding dispersal. Moreover, the dispersal of either sex did not change when dispersing alongside high- or low-dispersive individuals of the same sex. This suggested that the observed plasticity in dispersal was indeed due to mate-finding dispersal, and not mate-independent density effects.</p> <p>5. Strong mate-finding dispersal can diminish the magnitude of sex bias in dispersal. This can modulate the evolutionary processes that shape range expansions and invasions, depending on the population size. In small populations, mate-finding dispersal can ameliorate Allee effects. However, in large populations, it can dilute the effects of spatial sorting. 28-May-2020</p>

opencc-zeroJun 2020View details →
dryad36/100

Data from: Inducing seed dispersal by generalist frugivores: A new technique to overcome dispersal limitation in restoration

<p><b>1.</b> Dispersal limitation severely impairs the trajectory of restoration, mainly due to the lack of seed vectors bringing seeds from nearby habitats; a role played by many frugivorous vertebrates that can be absent or reduced in restored or degraded sites.</p> <p><b>2.</b> Here we propose a new technique named Induced Seed Dispersal, that amplifies the role that many generalist frugivores have in seed dispersal. It consists in the offering of seeds embedded in the pulp of commercial fruits or whole native fleshy fruits in feeders to generalist frugivores, which ingest the seeds and defecate them elsewhere. We set feeders in a restored site and monitored the visiting pattern of these frugivores with cameras-traps. We also set seed traps to retrieve seeds dispersed by frugivores and offered around 1500 seeds of <i>Cecropia hololeuca</i> (Urticaceae) per week for one year.</p> <p><b>3</b>. We recorded at least 24 generalist frugivore species of terrestrial mammals, bats, and birds, which ingested/removed the seeds/fruits from the feeders. Seeds of <i>C. hololeuca</i> dispersed by marmosets were retrieved in the seed traps and germinated. We estimated a potential seed rain of more than 600 <i>C. hololeuca </i>seeds ha<sup>-1</sup> mo<sup>-1</sup>.</p> <p><b>4</b>. <i>Synthesis and applications</i>. Our study demonstrates that this new technique can make use of generalist frugivores to assist restoration or regeneration into sites where seed dispersal is compromised by the lack of dispersers or limited seed arrival. Inducing seed dispersal by generalist frugivores is a low-cost and easy-managed technique that can be applied year-round in restoration and forest enrichments at all scales.</p>

opencc-zeroJul 2020View details →
dryad36/100

Small fish, large river: surprisingly minimal genetic structure in a dispersal-limited, habitat specialist fish

<p>Genetic connectivity is expected to be lower in species with limited dispersal ability and a high degree of habitat specialization (intrinsic factors). Also, gene flow is predicted to be limited by habitat conditions such as physical barriers and geographic distance (extrinsic factors). We investigated the effects of distance, intervening pools, and rapids on gene flow in a species, the Tuxedo Darter (<i>Etheostoma lemniscatum</i>), a habitat specialist that is presumed to be dispersal-limited. We predicted that the interplay between these intrinsic and extrinsic factors would limit dispersal and lead to genetic structure even at the small spatial scale of the species range (a 38.6 km river reach). The simple linear distribution of <i>E. lemniscatum </i>allowed for an ideal test of how these factors acted on gene flow and allowed us to test expectations (e.g., isolation-by-distance) of linearly distributed species. Using 20 microsatellites from 163 individuals collected from 18 habitat patches, we observed low levels of genetic structure that were related to geographic distance and rapids, though these factors were not barriers to gene flow. Pools separating habitat patches did not contribute to any observed genetic structure. Overall, <i>E. lemniscatum</i> maintains gene flow across its range and is comprised of a single population. Due to the linear distribution of the species, a stepping stone model of dispersal best explains the maintenance of gene flow across its small range. In general, our observation of higher than expected connectivity likely stems from an adaptation to disperse due to temporally unstable and patchy habitat.</p>

opencc-zeroJan 2021View details →
dryad36/100

Data from: Declining demographic performance and dispersal limitation influence the geographic distribution of the perennial forb, Astragalus utahensis (fabaceae)

1. A central goal of ecology is understanding the determinants of species' distributions. 'Metapopulation' models for the existence of distributional boundaries predict that species' geographic ranges arise from the landscape-scale deterioration of habitat suitability towards the range edge (i.e. niche mechanisms), which simultaneously hinders demographic performance and limits dispersal to suitable habitat beyond the edge (i.e. dispersal limitation). However, few studies have examined both of these mechanisms for the same species by examining abundance and comprehensive measures of demographic performance across the distribution and beyond its boundary. 2. We tested the predictions of metapopulation models for range limits by contrasting abundance, demographic performance, and population growth (λ) of the perennial forb Astragalus utahensis in central and northern range edge populations. We tested for dispersal limitation by transplanting individuals at and beyond the northern range boundary and monitoring their demographic performance. 3. Astragalus abundance and stochastic λ decreased from the range center to the northern range edge, with stochastic λ falling to or below replacement in range edge populations. However, transplants at some sites beyond the northern range edge survived and reproduced at levels similar to transplants within the range. Thus, in addition to deteriorating conditions at the range edge, dispersal limitation appears to contribute to limiting A. utahensis' northern distribution. 4. Synthesis: Our results support metapopulation models for range limits by suggesting that decreased demographic performance constrains the viability of range edge populations while contributing to dispersal limitation of A. utahensis' distribution. Thus, the tandem action of niche and dispersal processes appears to play an important role in constraining this species' northern latitudinal range.

opencc-zeroDec 2017View details →
zenodo36/100

Data from: Limiting burrowing activity and overland dispersal of the invasive alien red swamp crayfish Procambarus clarkii by sophisticated design of watercourses

<p>Two datasets belonging to the paper "Limiting burrowing activity and overland dispersal of the invasive alien red swamp crayfish <i>Procambarus clarkii</i> by sophisticated design of watercourses" published in Ecological Engineering (https://doi.org/10.1016/j.ecoleng.2022.106787), are provided here.&nbsp;</p><p>&nbsp;</p><p>The first dataset "Burrow data from Limiting burrowing activity and overland dispersal P. clarkii.csv" contains data from an inventory of crayfish burrows in three watercourses in the municipality of Horssen (Province of Gelderland), the Netherlands. These data were collected during a lowering of the water level in these watercourses, which takes place annually in the winter period to prevent nuisance from excessively high phreatic groundwater in agricultural areas. The sites were located up to 5 km apart. On each bank, red swamp crayfish burrows with tunnel openings in banks below the shoreline were counted from the opposite bank of the watercourse using binoculars. This field survey was performed in March 2019 when the water level was lowered for the maintenance of the watercourses. The chance of overlooking burrows was very low as the vegetation cover was low in this period. Three sites with 'natural-like' banks (banks rehabilitated to a natural profile during rehabilitation projects, in the dataset referred to as 'natural' banks) were chosen in the area with a lowered water level and presence of red swamp crayfish. At site 1, 2 and 3, a total of 125, 46 and 18 bank transects respectively, each one 10 metres long, were surveyed. Banks were categorized as follows: (a) non-natural (steep, <i>viz</i>. &gt; 40°, and barely vegetated; n = 77), (b) semi-natural (steep with some vegetation; n = 50), and (c) natural (gentle sloping, <i>viz</i>. &lt; 25°, with a diverse, well-developed submerged and emergent vegetation; n = 62). See the paper for schematic cross-sections of three bank types.</p><p>The second dataset "Inclination experiment data from Limiting burrowing activity and overland dispersal P. clarkii.csv" contains data of an inclination experiment to relate frequencies of overland movement of the red swamp crayfish to several inclinations and substrate types. For this purpose, a wooden plate of 120&nbsp;x&nbsp;180 cm with a 10 cm thick layer of soil was used as a base on which three lanes of 40 cm wide and 180 cm long were constructed with one substrate type each: a) bare sandy soil, b), species-poor grassland with low (2-5 cm) vegetation and c) tall (40-50 cm) herbaceous-rich grassland. Inclinations applied for this experiment were 0°, 10°, 20° and 30°.&nbsp;Individuals were randomly selected for each treatment and placed in the middle of a lane and oriented perpendicular to the lane. After each trial, the crayfish was placed back in the water container and replaced by another crayfish. There was a minimum period of at least one hour between each trial for each crayfish. Each crayfish was used once for each substrate type and inclination test, and the treatment order was randomised for each animal. A crayfish was placed in the middle of the lane and could freely move around for a period of three minutes. Hereafter, by the change of its position on the lane after 3 minutes it was recorded whether an individual moved up (or left in case of 0°), down (or right in case of 0°), or did not move.&nbsp;In total, 273 trials were conducted. Trial numbers differ between treatments due to mortality of three animals during storage.</p><p>&nbsp;</p><p>Abstract</p><p>&nbsp;</p><p>Invasive alien crayfish species pose major ecological and hydrological risks globally.&nbsp;The red swamp crayfish (<i>Procambarus clarkii</i>) is one of the most widespread crayfish species&nbsp;worldwide.&nbsp;Its impacts arise from burrowing activities&nbsp;and&nbsp;lead to mobilization of soil nutrients, water safety risks by instability of dikes and erosion of banks. Increased sediment load demands additional dredging of drainage ditches and canals to ensure their water discharge capacity. Sustainable methods for limiting burrowing in banks and dispersal behaviour of crayfish were not yet available. Therefore, a field study was performed to determine whether the number of burrows and overland movement of crayfish were related to a particular bank type. Burrows were counted in three watercourses during a water-level decline. The number of burrows was significantly lower in natural banks than in non-natural and semi-natural banks. The construction of natural-like banks along watercourses may significantly reduce sediment load, erosion and&nbsp;the&nbsp;collapse of banks by burrowing activities of crayfish. An inclination experiment mimicking various types of terrestrial dispersal barriers elucidated that steepness, soil type and vegetation structure of small embankments near watercourses were significant factors for manipulating overland movement of crayfish.&nbsp;Crayfish were taken out of the water for this purpose and placed on small experimental embankments varying in slope and types of vegetation.&nbsp;The lowest frequencies of upward movement were recorded at inclinations of 20° and 30° on bare sandy soil and short and species-poor grassland substrates. This implies that crayfish crawling out of the water will return to the watercourse when encountering such a dispersal barrier. Therefore, a sophisticated design of embankments along watercourses can be a tool to reduce colonization risk of nearby located, hydrologically isolated water bodies with high nature values.&nbsp;</p>

opencc-by-4.0Oct 2023View details →
dryad36/100

Dispersal and coastal geomorphology limit potential for mangrove range expansion under climate change

<p>Latitudinal range limits for mangroves on high-energy, wave-dominated coasts are controlled by geomorphological features and estuarine dynamics. Mangroves reach a southern global range limit along the South African coastline, but the distribution is patchy, with stands occurring in only 16% of the estuaries in the region. Yet, the persistence of forests planted &gt;50 years ago beyond the natural distribution limit suggests that additional estuaries could support mangroves. Understanding regional drivers is necessary to inform global scale estimates for how this important ecosystem is predicted to respond to climate change.</p> <p>Here, we combine species distribution modeling (MaxEnt), Lagrangian particle tracking using an eddy- and tide-resolving numerical ocean model, and connectivity matrices, to identify suitable mangrove habitats at present, as well as under the IPCC RCP4.5 and RCP8.5 climate scenarios.</p> <p>Within the current South African distribution range (± 900 km), eight more estuaries were identified as suitable under contemporary conditions. When considering potential range extension (± 110 km), an additional 14 suitable estuaries were identified. Connectivity matrices suggest limited long-distance dispersal, stranding mostly at or near the release location, and a decreased probability of connectivity towards the range limit. Under both future climate scenarios, 30% of estuaries currently supporting mangroves are predicted to become unsuitable, while an additional six estuaries beyond the current distribution are predicted to become suitable. However, there is limited connectivity between these new sites and established forests.</p> <p><em>Synthesis</em>: This study shows that dispersal substantially limits mangrove distribution at the southern African range limit and highlights the importance of including this process in species distribution models. Ultimately, our results provide new insight for mangrove conservation and management at range limits that are not controlled predominantly by temperature, as it has been assumed that mangroves will largely expand to higher latitudes under climate change.</p>

opencc-zeroOct 2022View details →
dryad36/100

Data from: Within-species trait variation can lead to size limitations in seed dispersal of small-fruited plants

<p>The inability of small-gaped animals to consume very large fruits may limit seed dispersal of the respective plants. This has often been shown for large-fruited plant species that remain poorly dispersed when large-gaped animal species are lost due to anthropogenic pressure. Little is known about whether gape-size limitations similarly influence seed dispersal of small-fruited plant species that can show a large variation in fruit size within species.</p> <p>In this study, fruit sizes of 15 plant species were compared with the gape sizes of their 41 animal dispersers in the temperate, old-growth Białowieża Forest, Poland. The effect of gape-size limitations on fruit consumption was assessed at the plant species level, and for a subset of nine plant species, also at the individual level, and subindividual level (i.e., fruits of the same plant individual). In addition, for the species subset, fruit-seed trait relationships were investigated to determine whether a restricted access of small-gaped animals to large fruits results in the dispersal of fewer or smaller seeds per fruit.</p> <p>Fruit sizes widely varied among plant species (74.2%), considerably at the subindividual level (17.1%), and to the smallest extent among plant individuals (8.7%). Key disperser species should be able to consume fruits of all plant species and all individuals (except those of the largest-fruited plant species), even if they are able to consume only 28-55% of available fruits. Fruit and seed traits were positively correlated in eight out of nine plant species, indicating that gape size limitations will result in 49% fewer (in one plant species) or 16-21% smaller seeds (in three plant species) dispersed per fruit by small-gaped than by large-gaped main dispersers, respectively.</p> <p>Our results show that a large subindividual variation in fruit size is characteristic for small-fruited plant species, and increases their connectedness with frugivores at the level of plants species and individuals. Simultaneously, however, the large variation in fruit size leads to gape-size limitations that may induce selective pressures on fruit size if large-gaped dispersers become extinct. This study emphasizes the mechanisms by which gape-size limitation at the species, individual and subindividual level shape plant-frugivore interactions and the co-evolution of small-fruited plants.</p>

opencc-zeroAug 2021View details →
dryad36/100

Data from: Predicting range shifts of pikas (Mammalia, Ochotonidae) in China under scenarios incorporating land-use change, climate change, and dispersal limitations

<p><span>Two of the most important forces affecting biodiversity are land-use change (LUC) and global climate change (GCC). Previous studies have modeled their impacts on species separately and together, but few have done so for multiple species with dispersal limitations incorporated into the models.</span></p> <p><span>We integrate species distribution models plus a dispersal model to predict LUC and GCC impacts on the ranges of five species of pikas in the Qinghai-Tibet Plateau region of China. Pikas are sensitive to land-use and climate change, and have limited dispersal abilities.</span></p> <p><span>The predicted impacts of LUC and GCC on pikas vary between species as well as between LUC and GCC projections. Incorporation of dispersal limitations appreciably restricts the amount of colonized habitat. For all five species, the amount of habitat abandoned or colonized when LUC and GCC are modeled together is less than the sum of LUC and GCC modeled separately. Three of the five species experience a net increase in occupied habitat by 2080 relative to their current ranges under all modeled projections. However, relative to a "Dispersal Only" baseline scenario that assumes no environmental change but continued range expansion into suitable, unoccupied habitat, all five species suffer a net loss of occupied habitat by 2080 under some or all projections.</span></p> <p><span>Predictions of future distributions of species based solely on LUC or GCC, as well as predictions assuming additive impacts, can be misleading. Inclusion of dispersal limitations in models markedly alters predicted future distributions of species. The use of a "Dispersal Only" scenario provides a different and perhaps more accurate way to gauge net impacts to species. Future work should consider incorporating all these parameters to better predict the impacts of LUC and GCC on biodiversity.</span></p>

opencc-zeroAug 2021View details →
dryad36/100

Limited seed dispersal shapes fine-scale spatial genetic structure in a Neotropical dioecious large-seeded palm

<p><span>Seed and pollen dispersal contribute to gene flow and shape the genetic patterns of plants over fine spatial scales. We inferred fine-scale spatial genetic structure (FSGS) and estimated realized dispersal distances in Phytelephas aequatorialis, a Neotropical dioecious large-seeded palm. We aimed to explore how seed and pollen dispersal shape this genetic pattern in a focal population. For this purpose, we genotyped 138 seedlings and 99 adults with 20 newly developed microsatellite markers. We tested if rodent-mediated seed dispersal has a stronger influence than insect-mediated pollen dispersal in shaping FSGS. We also tested if pollen dispersal was influenced by the density of male palms around mother palms in order to further explore this ecological process in large-seeded plants. Rodent-mediated dispersal of these large seeds occurred mostly over short distances (mean 34.76 ± 34.06 m) while pollen dispersal distances were two times higher (mean 67.91 ± 38.29 m). The spatial extent of FSGS up to 35 m and the fact that seed dispersal did not increase the distance at which male alleles disperse suggest that spatially limited seed dispersal is the main factor shaping FSGS and contributes only marginally to gene flow within the population. Pollen dispersal distances depended on the density of male palms, decreasing when individuals show a clumped distribution and increasing when they are scattered. Our results show that limited seed dispersal mediated by rodents shapes FSGS in P. aequatorialis, while more extensive pollen dispersal accounts for a larger contribution to gene flow and may maintain high genetic diversity.</span></p>

opencc-zeroOct 2022View details →
dryad36/100

Supporting data for: Limited genetic differentiation of Mycetomoellerius mikromelanos in Parc National Soberanía, Panama: Implications for queen dispersal

<p>The coevolutionary relationship between fungus-growing ants (Formicidae: Attini: Attina) and their symbionts has been well-studied in the Panamanian rainforests. To further understand the ecological context of these evolutionary relationships, we have examined the population genetic structure of the fungus-growing ant species<em> Mycetomoellerius</em> <em>mikromelanos</em> Cardenas, Schultz, &amp; Adams 2021, in the Panama Canal Zone. We specifically investigated the presence of population structure, the significance of geographic features (i.e., creeks) limiting gene flow, and relatedness between ant colonies. To accomplish this, we genotyped 85 ant colonies from nine creeks across an approximately 30 km transect in Parque National Soberanía, Panama using double digest restriction-site associated DNA sequencing. We did not find distinct population structures using two genetic clustering methods; however, we did detect an effect of isolation by distance. Furthermore, related colonies were frequently detected on the same creek or neighboring creeks, and some at further geographic distances. Collectively, these findings demonstrate that new colonies tend to establish on natal creeks and occasionally on distant creeks following long-distance dispersal events. We discuss how population genetic patterns reveal the natural history of <em>M</em>. <em>mikromelanos</em> in Parque National Soberanía and how these results fit into the context of fungus-growing ant mutualisms.</p>

opencc-zeroNov 2022View details →
dryad36/100

Data from: eDNA-stimulated cell dispersion from Caulobacter crescentus biofilms upon oxygen limitation is dependent on a toxin-antitoxin system

<p><span>In their natural environment, most bacteria preferentially live as complex surface-attached multicellular colonies called biofilms. Biofilms begin with a few cells adhering to a surface, where they multiply to form a mature colony. When conditions deteriorate, cells can leave the biofilm. This dispersion is thought to be an important process that modifies the overall biofilm architecture and that promotes colonization of new environments. In <em>Caulobacter crescentus</em> biofilms, extracellular DNA (eDNA) is released upon cell death and prevents newborn cells from joining the established biofilm. Thus, eDNA promotes the dispersal of newborn cells and the subsequent colonization of new environments. These observations suggest that eDNA is a cue for sensing detrimental environmental conditions in the biofilm. Here we show that </span><span>the toxin-antitoxin system (TAS) <em>ParDE<sub>4</sub></em> stimulates cell death in areas of a biofilm with decreased O<sub>2</sub> availability. In conditions where O<sub>2</sub> availability is low, eDNA concentration is correlated with cell death. Cell dispersal away from biofilms is decreased when <em>parDE<sub>4</sub></em> is deleted, probably due to the lower local eDNA concentration. Expression of <em>parDE<sub>4</sub></em> is positively regulated by O<sub>2</sub> and the expression of this operon is decreased in biofilms where O<sub>2</sub> availability is low. Thus, a programmed cell death mechanism using an O<sub>2</sub>-regulated TAS stimulates dispersal away from areas of a biofilm with decreased O<sub>2</sub> availability and favors colonization of a new, more hospitable environment. </span></p>

opencc-zeroNov 2022View details →
dryad36/100

Data for: Dispersal-limited symbionts exhibit unexpectedly wide variation in host specificity

<p>A fundamental aspect of symbiotic relationships is host specificity, ranging from extreme specialists associated with only a single host species to generalists associated with many different species. Although symbionts with limited dispersal capabilities are expected to be host specialists, some are able to associate with multiple hosts. Understanding the micro- and macroevolutionary causes of variations in host specificity is often hindered by sampling biases and the limited power of traditional evolutionary markers. Here, we studied feather mites to address the barriers associated with estimates of host specificity for dispersal-limited symbionts. We sampled feather mites (Proctophyllodidae) from a nearly comprehensive set of North American breeding warblers (Parulidae) to study mite phylogenetic relationships and host-symbiont codiversification. We used pooled-sequencing (Pool-Seq) and short-read Illumina technology to interpret results derived from a traditional barcoding gene (cytochrome c oxidase subunit 1) versus 11 protein-coding mitochondrial genes using concatenated and multispecies coalescent approaches. Despite the statistically significant congruence between mite and host phylogenies, mite-host specificity varies widely, and host switching is common regardless of the genetic marker resolution (i.e., barcode versus multilocus). However, the multilocus approach was more effective than the single barcode in detecting the presence of a heterogeneous Pool-Seq sample. These results suggest that presumed symbiont dispersal capabilities are not always strong indicators of host specificity or of historical host-symbiont coevolutionary events. Comprehensive sampling at fine phylogenetic scales may help to better elucidate the microevolutionary filters that impact macroevolutionary processes regulating symbioses, particularly for dispersal-limited symbionts.</p>

opencc-zeroApr 2023View details →
dryad36/100

Dispersal limitation predicts the spatial and temporal filtering of tropical bird communities in isolated forest fragments

<p>The link between dispersal traits and patterns of community assembly remains a frontier in understanding how vertebrate communities persist in fragmented landscapes. Using experimental release trials and intensive field surveys of bird communities in fragmented forests of the Peruvian and Colombian Andes, we demonstrate that morphological traits related to movement (1) predict experimental flight performance and (2) exhibit dispersal-mediated environmental filtering at the community scale. After correcting for body size, four traits hypothesized to influence flight ability (wing length, wing pointedness, wing loading, and eye size) predicted distance flown across a hostile experimental landscape, with successful species having significantly longer pointed wings, carrying less mass per unit wing area (i.e., lower wing loading), and having smaller eyes. Species with larger eyes also displayed increased flight latency, potentially due to disability glare. At the community scale we detected a gradient of dispersal-mediated environmental filtering in fragments compared to reference forest within the same landscape, with relative differences in trait values explained by the temporal and spatial extent of patch isolation. In the Colombian landscape where fragments had been isolated for &gt; 60 years, communities were filtered for species with long and narrow wings and small eyes, especially within the most spatially isolated fragments. We observed the opposite pattern in the more recently fragmented Peruvian landscape (15-30 years): communities within fragments tended to have shorter and more rounded wings compared to those in nearby contiguous forests, suggesting that dispersal-limited species accumulate in the initial years following patch isolation due to "restricted dispersal" and represent an extinction debt yet to be paid. Our results (1) experimentally validate the use of morphological traits as proxies for movement ability in fragmented landscapes, (2) demonstrate that visual acuity functions as a novel dimension of dispersal limitation, and (3) quantify how the spatial and temporal components of patch isolation produce a gradient in dispersal-mediated environmental filtering and extinction debt for communities inhabiting fragments.</p>

opencc-zeroOct 2023View details →
zenodo36/100

Dataset: Limited seed dispersal, allelopathy and unfavorable microclimatic conditions prevent the recovery of oak forests within Eucalyptus plantations

<p>This repository contains the files associated with the following article:</p> <p>Ernesto I. Badano, Pablo Siller-Clavel. Limited seed dispersal, allelopathy and unfavorable microclimatic conditions prevent the recovery of oak forests within&nbsp;<em>Eucalyptus</em> plantations. Published in <em>European Journal of Forest Research</em>.</p> <p>The repository provides an interactive map, optimized for Google Earth, that shows the administrative area of the Park L&aacute;zaro C&aacute;rdenas del Rio located in the state of Puebla, Mexico (yellow polygon) and the areas covered by plantations of&nbsp;<em>Eucalyptus camaldulensis</em> (red polygons) by the years in which the study was conducted (2009-2011). The areas that are not highlighted within the park correspond to oak forest remnants and some deforested areas. The interactive map also provides the geographic coordinates of the 100 square plots of 1x1 m used to sample the oak seed banks within forest remnants and plantations in 2009 and 2010, as well as the geographic coordinates of the 200 experimental plots located in each of these habitat types. To display this information, click on the corresponding the boxes located in the lateral bar of Google Earth.</p> <p>The data that support the result of the study are provided in Microsoft Excel files. The first of these files (Dataset 01 - Acorn density.xlsx) has a single sheet indicating the number of acorns recorded on 100 square plots of 1x1 m randomly distributed in the understories of forest remnants and plantations. The second file (Dataset 02 - Acorn germination trials.xlsx) has two sheets with the data used to estimate acorn germination rates of&nbsp;<em>Quercus castanea</em> and <em>Quercus laeta</em> in the <em>in vitro</em> and greenhouse germination trials. The third file (Dataset 03 - Field experiment.xlsx) has two sheets, where the first one contains the data used to estimate acorn germination rates and seedling survival of <em>Quercus castanea</em> and <em>Quercus laeta</em> on soil of <em>Eucalyptus</em> plantations and oak forests in these two habitats, and the second one contains the microclimatic data (photosynthetic photon flux density, air temperature, rainfall and volumetric soil water content) measured in plantations and forests.</p>

opencc-by-4.0Dec 2023View details →
dryad36/100

Environment filtering and dispersal limitation jointly shaped the taxonomic and phylogenetic beta diversity of natural forests in southern China

Open the record for dataset details and reuse information.

publicMay 2021View details →

ScienceDex guides

Understand access before you commit

These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record