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637 results for “eCLIP”
ECLIPS 1.1 - European CLimate Index ProjectionS database
<p>Based on the available bias corrected regional climate model results, which were created under the CORDEX project we calculated several climate indices both for past and future. (http://cordex.org/data-access/bias-adjusted-rcm-data/)</p> <p>This database contains ascii files for climate index maps with a horizontal resolution of 0.11 degree ( on a regular grid ) for Europe.</p> <p>Five GCM-RCM pairs for RCP4.5 and RCP8.5 scenarios are available for three future periods: 2041-2060, 2061-2080, 2081-2100 and one past period :1961-1990</p> <p>Additionally multi-model mean maps are available for the period 1961-1990 as a reference.</p> <p>The attached document gives information about the calculated indices and climate models ( Research paper is in prep.)</p> <p>21 zip files covers the database: 5-5 for each RCP scenarios (1 for each model) + 1 for the past period.</p> <p>File name conventions: <GCM name> <RCP scenario> <RCM name> <Index name> <period></p> <p>(GCM and RCM names are following the CORDEX name conventions)</p> <p> </p> <p>Contact: dobor.laura@gmail.com</p> <p> </p> <p> </p>
DKC1 eCLIP data
<p>eCLIP bedfile of DKC1 from ENCODE consortium </p>
European eCLIPS™ Safety, Feasibility and Efficacy Study
ClinicalTrials.gov study NCT02607501. IPD Sharing: NO. Countries: 3. Publications: 1.
French eCLIPs™ Efficacy and Safety Investigation
ClinicalTrials.gov study NCT05330897. IPD Sharing: Not stated. Countries: 1. Publications: 1.
High-resolution gridded climate data for Europe based on bias-corrected EURO-CORDEX: the ECLIPS-2.0 dataset
<p>We developed a new climate dataset for Europe referred to as ECLIPS (European CLimate Index ProjectionS), which contains gridded data for 80 annual, seasonal, and monthly climate variables for two past (1961-1990, 1991-2010) and five future periods (2011-2020, 2021-2140, 2041-2060, 2061-2080, 2081-2100). The future data are based on five Regional Climate Models (RCMs)driven by two greenhouse gas concentration scenarios, RCP 4.5 and 8.5.</p> <p>The ECLIPS dataset has two versions; ECLIPS 1.1 contains data with spatial resolution of 0.11° × 0.11°, which is the resolution of underlying RCMs. ECLIPS1.1 is available at <a href="https://doi.org/10.5281/zenodo.1181780">https://doi.org/10.5281/zenodo.1181780</a>.</p> <p>The ECLIPS 2.0 presented here contains a subset of climate indices of ECLIPS 1.1, downscaled to the resolution of 30 arcsec by means of the delta correction approach. Both ECLIPS versions were evaluated by testing their relationship with independent station data from the European Climate Assessment (ECA) dataset. Correlations of the empirical testing data to ECLIPS 1.1 ranged from 0.63 to 0.78,and to ECLIPS 2.0 from 0.78 to 0.93. suggesting substantial improvement due to downscaling. A large number of climate projections, time periods and indices as well as the availability of these data at two different spatial resolutions can support diverse studies across a range of disciplines and thus extend our understanding of climate-sensitive dynamics of many social-ecological systems</p> <p>The zipfile ECLIPS2.0 contains 5 folders with subfolders</p> <p>File naming system for the subfolders / folder are as follows</p> <p>ECLIPS2.0_196191: past climate 1961-1990: < climate index><period></p> <p>ECLIPS2.0_199110: past climate 1991-2010 < climate index><period></p> <p>ECLIPS2.0_45 : future climate RCP4.5 <subfolder-Model name> < climate index><period></p> <p>ECLIPS2.0_85 : future climate RCP8.5 <subfolder-Model name> < climate index><period></p> <p>Incase zpfile reader 7zip is not available, please install from here: <a href="https://www.7-zip.org/">https://www.7-zip.org/</a></p>
PanRBPNet ENCODE Dataset (filtered by min max-positional CL count of 5, across eCLIP and SMInput)
Open the record for dataset details and reuse information.
PanRBPNet ENCODE Dataset (filtered by min max-positional CL count of 3, across eCLIP and SMInput)
Open the record for dataset details and reuse information.
rbp_eclip model files
'RBP binding model from Avsec et al: "Modeling positional effects of regulatory sequences with spline transformations increases prediction accuracy of deep neural networks". '
Control eCLIP from adrenal gland (ENCSR217SVF)
GEO Series GSE176733. Homo sapiens. 2 samples. Type: Other.
eCLIP from HepG2 (ENCSR085JPB)
GEO Series GSE176970. Homo sapiens. 2 samples. Type: Other.
eCLIP of Drosophila Asterix/Gtsf1 (endogenous promoter) in Drosophila ovarian somatic sheath (OSS) cells
GEO Series GSE151109. Drosophila melanogaster. 6 samples. Type: Other.
Control eCLIP from K562 (ENCSR241ALC)
GEO Series GSE176820. Homo sapiens. 1 samples. Type: Other.
Systematic identification of RNA-binding proteins and tethered domains that activate exon splicing inclusion [eCLIP-seq]
GEO Series GSE232597. Homo sapiens. 20 samples. Type: Other.
Control eCLIP from K562 (ENCSR290JPJ)
GEO Series GSE177004. Homo sapiens. 1 samples. Type: Other.
eCLIP from HepG2 (ENCSR279UJF)
GEO Series GSE91631. Homo sapiens. 2 samples. Type: Other.
eCLIP from HepG2 (ENCSR061SZV)
GEO Series GSE176838. Homo sapiens. 2 samples. Type: Other.
eCLIP from K562 (ENCSR891RIC)
GEO Series GSE178034. Homo sapiens. 2 samples. Type: Other.
eCLIP from K562 (ENCSR958FKZ)
GEO Series GSE177941. Homo sapiens. 2 samples. Type: Other.
eCLIP from HepG2 (ENCSR384KAN)
GEO Series GSE91714. Homo sapiens. 2 samples. Type: Other.
METTL3 preferentially enhances non-m6A translation of epigenetic factors and promotes tumorigenesis (eCLIP-seq)
GEO Series GSE191170. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
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OpenNeuro
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