Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
7
datasets available to search
ShareScore release 0.9.0
Dataset results
7 results for “elevator transporter”
Molecular insights into substrate translocation in an elevator-type metal transporter
<p>This dataset contains biased simulation trajectories for the paper entitled "Molecular insights into substrate translocation in an elevator-type metal transporter." The trajectories are named based on the information provided in the paper. The deposited trajectories contain only the protein and zinc metal ions; due to size constraints, we retained only these components and removed the rest. The entire systems and additional input files are available upon request to the authors. The dataset comprises four folders named as follows: </p> <p>First_scenario, Second_scenario, Third_scenario, and Last_scenario.</p> <p>To extract the contents of the compressed file (.tar.gz), use the following command line:</p> <p>tar -xzvf zip_transporter.tar.gz</p> <p>Each folder contains topology files and their corresponding trajectory files. The term "Rep" in the file names denotes the simulation replicates. For instance, "rep1" indicates the first simulation replicate mentioned in the paper. All analyses were performed using cpptraj and VMD software. Custom codes for performing the analyses are available at https://gitlab.msu.edu/jafarima/zip-transporter.git.</p>
Comprehensive Set of Structural Comparisons of Transport Domains from Elevator Transporters
<p>This upload is a supplementary dataset for the following preprint: <a href="https://doi.org/10.1101/2023.06.14.544989">N. Trebesch and E. Tajkhorshid. "Structure Reveals Homology in Elevator Transporters." <em>bioRxiv</em>. (2023). DOI: 10.1101/2023.06.14.544989.</a> Please see the preprint for the methods, analysis, and discussion associated with this dataset.</p>
A computational study of the structure and function of human Zrt and Irt-like proteins metal transporters: An elevator-type transport mechanism predicted by AlphaFold2
<p>Data produced and analyzed in the manuscript "A computational study of the structure and function of human Zrt and Irt-like proteins metal transporters: An elevator-type transport mechanism predicted by AlphaFold2" by Pasquadibisceglie et al.</p> <p><br> If you include these data in your manuscript, please cite: Pasquadibisceglie A, Leccese A and Polticelli F (2022) A computational study of the structure and function of human Zrt and Irt-like proteins metal transporters: An elevator-type transport mechanism predicted by AlphaFold2. <em>Front. Chem.</em> 10:1004815. doi: 10.3389/fchem.2022.1004815</p>
Sand transport processes change in response to changing atmospheric properties at higher elevations
Open the record for dataset details and reuse information.
Investigating Whether Acute Elevation of Fatty Acid Levels Alters Cerebral Glucose Transport and Metabolism
ClinicalTrials.gov study NCT04328337. IPD Sharing: NO. Countries: 1. Publications: 0.
Elevated levels of UDP-Glucuronic acid mitigate drug resistance and stress response through a protease and a nucleotide sugar transporter in Cryptococcus gattii
GEO Series GSE289668. Cryptococcus gattii. 12 samples. Type: Expression profiling by high throughput sequencing.
Root-shoot mineral transport as a key target processes involved in Arabidopsis responsiveness to elevated [CO2] conditions
GEO Series GSE64694. Arabidopsis thaliana. 12 samples. Type: Expression profiling by array.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.