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Dataset results
8 results for “error quantification”
Research Data/Code for "Scale-bridging within a complex model hierarchy for investigation of a metal-fueled circular energy economy by use of Bayesian model calibration with model error quantification"
<p>This repository contains research data and code for supplementing the manuscript <br>"Scale-bridging within a complex model hierarchy for investigation of a metal-fueled circular energy economy by use of Bayesian model calibration with model error quantification" <br>by L. Gossel, E. Corbean, S. Dübal, P. Brand, M. Fricke, H. Nicolai, C. Hasse, S. Hartl, S. Ulbrich, and D. Bothe. </p> <p>There is a corresponding preprint available on Arxiv: https://doi.org/10.48550/arXiv.2404.13092</p> <p><br>Users are referred to the manuscript for background information. This repository shall enable reproduction of the reported results and does not stand alone. </p> <p>Please read important information in the README in the top-level directory. </p> <p>Funded by the Hessian Ministry of Higher Education, Research, Science and the Arts - cluster project Clean Circles. </p>
Citation count error data for "Data inaccuracy quantification and uncertainty propagation for bibliometric indicators"
<p>This is the original collected data on citation count errors resulting from citation matching errors in Web of Science data for the publication "Data inaccuracy quantification and uncertainty propagation for<br>bibliometric indicators". The first column, <code>CITCOUNT_ALL</code>, gives the total (corrected) citation count for a publication, which is the citation count according to WoS plus the additionally manually identified citations (missed by WoS's algorithm). The second column, <code>CITCOUNT_WOS</code>, is the WoS citation count. The numeric difference between the two column values in one row is the number of additionally manually identified citations.</p>
Dataset for: "Quantification of Geometric Errors Made Simple: Application to Main-Group Molecular Structures"
<p>This dataset contains geometric energy offset (GEO') values for a set of density functional theory (DFT) methods for the B2se set of molecular structures. The data was generated as part of a research project aimed at quantifying geometric errors in main-group molecular structures. The dataset is in XLSX format created with MS Excel (version 16.69), and contains multiple worksheets with GEO' values for different basis sets and DFT methods. The worksheet headings, such as "AVQZ AVTZ AVDZ VQZ VTZ VDZ" represent different basis sets of Dunning theory, and the naming convention "(A)VnZ = aug-cc-pVnZ" is being used to label the worksheets. The data is organized in columns, with the first column providing the molecular ID and the names of the DFT methods specified in the first row of each worksheet. The molecular structures corresponding to each of these IDs can be found in Figure S1 of the supplementary information of the underlying publication [<a href="https://pubs.acs.org/doi/suppl/10.1021/acs.jpca.1c10688/suppl_file/jp1c10688_si_001.pdf">https://pubs.acs.org/doi/suppl/10.1021/acs.jpca.1c10688/suppl_file/jp1c10688_si_001.pdf</a>]. The data have been generated from quantum-chemical calculations from the G16 and ORCA 5.0.0 packages, with further computational details, methodology, and data validation strategies (e.g., comparisons with higher-level quantum-chemical calculations) given in the supplementary information of the underlying publication [<em>J. Phys. Chem. A</em> 2022, 126, 7, 1300–1311] and its supporting information [<a href="https://pubs.acs.org/doi/suppl/10.1021/acs.jpca.1c10688/suppl_file/jp1c10688_si_001.pdf">https://pubs.acs.org/doi/suppl/10.1021/acs.jpca.1c10688/suppl_file/jp1c10688_si_001.pdf</a>].<br> The dataset is expected to be useful to researchers in the field of computational chemistry and materials science. All values are given in kcal/mol. The data is generated by the authors of the underlying publication and it is shared under the Creative Commons Attribution 4.0 International (CC BY 4.0) license. The data is expected to be re-usable and the quality of the data is assured by the authors. The size of the data is 71 KB.</p>
ESPRESSO: Robust discovery and quantification of transcript isoforms from error-prone long-read RNA-seq data (repository for simulated ONT RNA-seq data)
<p>Simulated ONT direct RNA and 1D cDNA sequencing data of varying sequencing depths (0.5 million, 1 million, 3 million, and 5 million simulated reads) used for benchmark evaluations of transcript discovery and quantification in our paper "ESPRESSO: Robust discovery and quantification of transcript isoforms from error-prone long-read RNA-seq data". All details can be found in the <strong>Materials and Methods</strong> section of the paper. </p> <p><em>HEK293T_DirectRNA.transcriptome_quantification.tsv</em> and <em>HEK293T_DirectRNA.transcriptome_quantification.tsv </em>are tab-separated files containing estimated raw read counts and normalized abundance values (in TPM) of transcripts annotated in GENCODE v34lift37. Transcript quantification was done using NanoSim (version 3.1.0). </p> <p><em>HEK293T_DirectRNA.NanoSim_500k.fastq.gz</em>,<em> </em><em>HEK293T_DirectRNA.NanoSim_1M.fastq.gz</em>, <em>HEK293T_DirectRNA.NanoSim_3M.fastq.gz</em>, and<em> HEK293T_DirectRNA.NanoSim_5M.fastq.gz </em>are gzip compressed FASTQ files containing 0.5 million, 1 million, 3 million, and 5 million simulated ONT direct RNA sequencing reads respectively. </p> <p><em>HEK293T_1DcDNA.NanoSim_500k.fastq.gz</em>,<em> HEK293T_1DcDNA.NanoSim_1M.fastq.gz</em>, <em>HEK293T_1DcDNA.NanoSim_3M.fastq.gz</em>, and<em> HEK293T_1DcDNA.NanoSim_5M.fastq.gz </em>are gzip compressed FASTQ files containing 0.5 million, 1 million, 3 million, and 5 million simulated ONT 1D cDNA sequencing reads respectively. </p>
Quantification of Error Sources with Inertial Measurement Units in Sports - Data and Matlab Scripts
<p>Inertial measurement units (IMUs) offer the possibility to capture the lower body motions of players of outdoor team sports. However, various sources of error are present when using IMUs: the definition of the body frames, the soft tissue artefact (STA) and the orientation filer. Methods to minimize these errors are currently being used without knowing their exact influence on the various sources of errors. The goal of this study was to quantify each of the sources of error of an IMU separately. An optoelectronic system was used as a golden standard. Rigid marker clusters (RMCs) were designed to construct a rigid connection between the IMU and four markers. This allowed for the separate quantification of each of the sources of error. Ten subjects performed nine different trials, varying both in type of movement and in movement intensity. The error of the definition of the body frames (10.9-18.1 deg RMSD), the STA (3.6-9.4 deg RMSD) and the error of the orientation filter (2.8- 13.1 deg RMSD) were all quantified separately. The data and code to process the data can be found in this publication.</p> <p> </p>
[Suplemental Materials] Accuracy of bird identifications in citizen science data: a quantification of errors using photographic records
<p><strong>Supporting Information</strong></p> <p><strong>Appendix S1</strong>. The full dataset used in this study with a reproducible R code to perform data quality and network analyses. </p> <p><strong>Appendix S2</strong>. All species ranking of identification accuracy of photo reports submitted to eBird in Argentina. The ranking is first ordered by the minimum value found for either precision and recall scores, and second by the number of samples analyzed for each species. Species that were tagged as difficult to identify are indicated as ‘TRUE’ in column D named ‘hard_to_id’.</p> <p><strong>Appendix S3</strong>. High-resolution network (Html file).</p>
Accuracy of bird identifications in citizen science data: a quantification of errors using photographic records [R code]
<p><strong>Appendix S1</strong>. The full dataset used in this study with a reproducible R code to perform data quality and network analyses. R code archived to Zenodo for publication. </p>
ESPRESSO: Robust discovery and quantification of transcript isoforms from error-prone long-read RNA-seq data
GEO Series GSE192955. Homo sapiens. 48 samples. Type: Expression profiling by high throughput sequencing.
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