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1,772 results for “gel”
Data for the manuscript "Enhanced microscopic dynamics in mucus gels under a mechanical load in the linear viscoelastic regime" (PNAS).
<p>Data files for the figures published in</p> <p>D. Larobina, A. Pommella, A.-M. Philippe, M. Y. Nagazi, and L. Cipelletti, <em>Enhanced Microscopic Dynamics in Mucus Gels under a Mechanical Load in the Linear Viscoelastic Regime</em>, Proc Natl Acad Sci USA <strong>118</strong>, e2103995118 (2021).</p> <p>DOI: 10.1073/pnas.2103995118</p> <p>Each data set is available as a plain text file (description in the file __README__DataDescription.txt), and as an Excel file.<br> The Excel files typically contain the data sets of several panels of a given figure, as separated sheets. See the description<br> provided in the "GeneralInfo" sheet of each Excel file.</p>
X-ray light-field - Gel bubbles - 1 deg angular range
<p>X-ray light-field of bubbles in hair gel, taken with the FleX-ray scanner, in the Computational Imaging group of CWI (Amsterdam).</p> <p>Angular range is ~1 degree, panel pixel size ~150 um.</p> <p>This bundle includes:</p> <ul> <li> <pre><code>light-field_corrected.vox</code></pre> Light-field in the VOX v0 data format (based on HDF5). Any HDF5 reader can open it. Native support is available here: <a href="https://github.com/cicwi/plenoptomos">https://github.com/cicwi/plenoptomos</a>. The image floating point precision is FP32. The images have been back-ground subtracted.</li> <li> <pre><code>light-field_acquisition_rawdata.tbz </code></pre> <p>Light-field acquisition raw data, archived with Tar and Bzip2. It contains TIF images as projections, dark-field and flat-field. The ini and txt files provide information about the scan (motor positions, etc).</p> </li> <li> <pre><code>tomo_acquisition_rawdata.tbz</code></pre> Tomographic acquisition raw data, archived with Tar and Bzip2. It contains TIF images as projections, dark-field and flat-field. The ini and txt files provide information about the scan (motor positions, angles, etc).</li> <li> <pre><code>tomo_reconstruction_and_segmentation.h5</code></pre> <p>Tomographic reconstruction of the raw data, in HDF5. Any HDF5 reader can open it. It contains two self-descriptive datasets: "volume" and "segmentation".</p> </li> </ul>
Raw gel images accompanying the publication: Koralewska et al, NAR 2024, Short 2'-O-methyl/LNA oligomers as highly-selective inhibitors of miRNA production in vitro and in vivo, DOI 10.1093/nar/gkae284
<p>A set of raw gel images used in the article: Koralewska <em>et al</em>. Short 2’-O-methyl/LNA oligomers as highly-selective inhibitors of miRNA production <em>in vitro</em> and <em>in vivo, </em>NAR 2024, DOI 10.1093/nar/gkae284.</p>
Thomas Gels (g1312)
<b>-- <a href="https://doi.org/10.5281/zenodo.11582199">Documentation</a> --</b><br><br><u>Name</u>: Thomas Gels<br><u>musiXplora-ID</u>: g1312<br><u>musiXplora-URI</u>: <a href="https://musixplora.de/mxp/g1312">https://musixplora.de/mxp/g1312</a><br><u>Gender</u>: m<br><u>Sectors</u>: Instrumentenbau, Kirche<br><u>Professions (Musical)</u>: Orgelbauer<br><u>Main Place of Activity</u>: Erding<br><br><br><u>Titel/Medien:</u><br><table><tbody><tr><th>Role</th><th>Sigel</th><th>Title</th><th>mXp-ID</th></tr><tr><td>Related</td><td>Bernhard 2003a</td><td>Orgeldatenbank Bayern</td><td><a href="https://musixplora.de/mxp/5001131">5001131</a></td></tr></tbody></table><br><br><u>Changelog</u>:<br> - v0.0.1: Initial Upload.<br>
Fig. 3 in Heterogeneity Studies Of Wild Clarias Gariepinus (Osteichthyes, Clariidae) Using Sds-Polyacrylamide Gel Electrophoresis
Fig. 3. Dendrogram obtained from Classical Cluster analysis using Paired group Bray-Curtis similarity index on C. gariepinus from two natural populations in Ado-Ekiti and Ilesa.
Fig. 2 in Heterogeneity Studies Of Wild Clarias Gariepinus (Osteichthyes, Clariidae) Using Sds-Polyacrylamide Gel Electrophoresis
Fig. 2. Dendrogram from Classical Cluster analysis using Paired group Bray-Curtis similarity index on Clarias gariepinus obtained in Ilesa, Osun State.
Fig. 1 in Heterogeneity Studies Of Wild Clarias Gariepinus (Osteichthyes, Clariidae) Using Sds-Polyacrylamide Gel Electrophoresis
Fig. 1. Dendrogram obtained from Classical Cluster analysis using Paired group Bray-Curtis similarity index on Clarias gariepinus in Ado-Ekiti.
Dataset: Sol-Gel Technologies Ltd. (SLGL) Stock Performance
This dataset provides historical stock market performance data for specific companies. It enables users to analyze and understand the past trends and fluctuations in stock prices over time. This information can be utilized for various purposes such as investment analysis, financial research, and market trend forecasting.
METADATA for results of irradiation-induced complex DNA damage measurements using plasmid pBR322 along a typical Proton Treatment Plan at the MedAustron proton and carbon beam therapy facility (energy 137–198 MeV and Linear Energy Transfer (LET) range 1–9 keV/μm), by means of Agarose Gel Electrophoresis and DNA fragmentation using Atomic Force Microscopy (AFM)
Open the record for dataset details and reuse information.
Fig. 3. Agarose gel image Fig. 4 in Optimization Of Dna Extraction Protocol For Dna Isolation From Air-Dried Collection Material For Further Phylogenetic Analysis (Coleoptera: Carabidae)
Fig. 3. Agarose gel image Fig. 4. Agarose gel image (successful PCR amplification) (failed PCR amplification) M: marker (bp) M: marker (bp) A1: Agonum fuliginosum Panzer, 1809 A: Agonum fuliginosum Panzer, 1809 A2: Agonum thoreyi Dejean, 1828 O: Omophron aequale aequale Morawitz, 1863 O: Omophron aequale aequale Morawitz, 1863 N: Notiophilus semistriatus Say, 1823 N: Notiophilus semistriatus Say, 1823 Nk: negative control. Nk: negative control.
Fig. 2. Multiplex PCR gel showing the 716 in Molecular diagnostics of the honey bee parasites Lotmaria passim and Crithidia spp. (Trypanosomatidae) using multiplex PCR
Fig. 2. Multiplex PCR gel showing the 716 to 724 bp amplicon for Lotmaria passim and Crithidia species, the L. passim specific 499 bp amplicon, and the Crithidia specific 245 bp amplicon.
BRAIN Journal-Suicide: Neurochemical Approaches-Figure 3. Representative gel electrophoreses showing the mRNA levels of BDNF, Trk B, NGF and Trk A
<p>Our present study, provides the evidence for the first time that two major neurotrophins<br> BDNF and NGF along with their cognitive TrkB and TrkA receptors are not only less expressed in<br> their protein levels but also their transcription levels are also compromised in postmortem brains of<br> suicide subjects as evident from the mRNA studies of the present experiment.</p>
Fig. 6. Electrophoresis agarose gel showing RFLP pattern comparison between the F2 in Detection of maize bushy stunt phytoplasma in leafoppers collected in native corn crops grown at high elevations in southeast Mexico
Fig. 6. Electrophoresis agarose gel showing RFLP pattern comparison between the F2nR2 sequences amplified from Dalbulus elimatus and Idiodonus wickhami digested with AluI, BstUI, HaeIII, HinfI, and Tsp509I. Molecular weight (MW) marker, 1 kb plus.
Synchrotron Radiation Pair Distribution Function Analysis of gels in cements
<p>Raw data for: Synchrotron Radiation Pair Distribution Function Analysis of Gels in Cements. doi: https://doi.org/10.3390/cryst7100317</p> <p> </p> <p>The analysis of atomic ordering in a nanocrystalline phase with small particle size, below »5 nm, is intrinsically complicated because of the lack of long range order. Furthermore, the presence of additional crystalline phase(s) may exacerbate the problem as it is the case in cement pastes. Here we use synchrotron pair distribution function (PDF) chiefly to characterize the local atomic order of the nanocrystalline phases, gels, in cement pastes. We have used a multi r-range analysis approach, where the ~4-7 nm r-range allows determining the crystalline phase contents; the ~1-2.5 nm r-range is used to characterize the atomic ordering in the nanocrystalline component; and the ~0.2-1.0 nm r-range give insights about additional amorphous components. Specifically, we have prepared four alite pastes, with variable water contents, and the analyses showed that a defective tobermorite, Ca<sub>11</sub>Si<sub>9</sub>O<sub>28</sub>(OH)<sub>2</sub><sup>.</sup>8.5H<sub>2</sub>O, gave the best fits. Furthermore, the PDF analyses suggest that the calcium silicate hydrate gel is composed of this tobermorite and amorphous calcium hydroxide. Finally, this approach has been used to study alternative cements. The hydration of monocalcium aluminate and ye'elimite pastes yield aluminum hydroxide gels. PDF analyses show that these gels are constituted by nanocrystalline gibbsite and the particle size can be as small as 2.5 nm.</p>
Gel phantom data for dynamic X-ray tomography
<p>The gel phantom was constructed to simulate diffusion of liquids inside plant stems, namely the flow of iodine-based contrast agents used in high resolution tomographic X-ray imaging of plants. In order to test different reconstruction methods, this radiation resistant phantom with similar diffusion properties was constructed.</p> <p>A more detailed documentation can be found on arXiv: <a href="https://arxiv.org/abs/2003.02841">https://arxiv.org/abs/2003.02841</a></p> <p>The phantom consists of a 50 ml Falcon test tube filled with agarose gel. After the agarose solidified, five cavities were made into the gel and filled with 20% sucrose solution to guarantee the diffusion by directing osmosis to the gel body. In addition densely punctured plastic straws were placed in the cavities to simulate cellular passages such as <em>phloem plasmodesmata</em> and to slow down the lateral diffusion.</p> <p>The primary measurements consisted of 17 consecutive time frames, with initial stage of no contrast agent followed<br> by steady increase and diffusion into the gel body over time. Each round of measurements consist of 360 projections with a fanbeam microCT-scanner, but we used only the central plane of the cone beam, resulting in 2D fan beam geometry.</p> <p>Data is given in two different resolutions corresponding to reconstructions of size 256 x 256 or 512 x 512, (<em>GelPhantomData_b4.mat</em> and <em>GelPhantomData_b2.mat</em> respectively). In addition to the primary measurements, a more densely sampled measurements from the first time step and an additional 18th time step are provided in <em>GelPhantom_extra_frames.mat</em>.</p> <p>The measurements are stored in special data structures containing all the necessary metadata. In combination with the MATLAB toolboxes this allows for easy application of forward operators and reconstruction algorithms.</p> <p>This is demonstrated using the included example codes. These require ASTRA Toolbox, Spot Linear Operator Toolbox and HelTomo Toolbox (v1) for MATLAB.</p> <p><strong>NOTE</strong>: Some of the metadata field names are different in HelTomo v2 and higher. Use of the data requires renaming (or adding) two fields in to the parameters:<br> numDetectorsPost = numDetectors;<br> effectivePixelSizePost = effectivePixelSize;<br> <strong>Update: </strong>in v1.2 the data and example codes have been updated to match HelTomo v2.1 convention. For backwards compatibility (with Heltomo 1.0) the old medatadata field names remain.</p> <p>The full cone-beam measurements and corresponding documentation are available in <a href="https://doi.org/10.5281/zenodo.7739984">Zenodo</a>.</p>
Data and statistical analysis scripts for manuscript on pennycress roots & response to nitrate using 3D gel system
<p>Data and statistical analysis scripts for manuscript on pennycress roots & response to nitrate using 3Dgel system</p> <blockquote> <p><strong>A temporal analysis and response to nitrate availability of 3D root system architecture in diverse pennycress (<em>Thlaspi arvense</em> L.) accessions</strong> - [<a href="https://doi.org/10.3389/fpls.2023.1145389">https://doi.org/10.3389/fpls.2023.1145389</a>]</p> </blockquote> <p>The following files contains:</p> <ul> <li><code>gel_data_preprocessing_20221024.R</code> - R statistics script for pre-processing data files from 3Dgel system GIARoots & DynamicRoots raw output</li> <li><code>gel_dataprocessing_20221229.R</code> - R statistics script for data processing of pre-processed 3D gel data</li> <li><code>TaGNS_N_Spring32.zip</code> - CSV data files and R statistics script for Spring32 grown under high, low, trace and zero N treatments.</li> <li><code>TaGNE_N_Accessions.zip</code> - CSV data files and R statistics script for 3 accessions under high and trace N treatments.</li> <li><code>TaGAA_N_Accessions.zip</code> - CSV data files and R statistics script for 24 diverse pennycress lines grown under high N conditions.</li> </ul>
Air-Q® SP Versus Air-Q® and I-gel: A Randomized Clinical Trial
ClinicalTrials.gov study NCT01592760. IPD Sharing: NO. Countries: 1. Publications: 1.
XEN-45 Gel Stent Versus Trabeculectomy in Glaucoma: Gold-Standard Pathway Study (GPS)
ClinicalTrials.gov study NCT03654885. IPD Sharing: YES. Countries: 1. Publications: 1.
Fig1. Gel electrophoresis 2 in Promising use of Polymerase Chain Reaction Associated to Reverse Transcription for the Detection ofthe America-1 Lineage of Canine Distemper Virus
Fig1. Gel electrophoresis 2% agarose
Fig2. Gel electrophoresis Agarose 2 in Promising use of Polymerase Chain Reaction Associated to Reverse Transcription for the Detection ofthe America-1 Lineage of Canine Distemper Virus
Fig2. Gel electrophoresis Agarose 2%.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.