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Supplementary Data for 'Crossing host boundaries: the evolutionary drivers and correlates of viral host jumps'
<p>This version provides the raw maximum likelihood trees with ancestral host states annotated, as described in Tan et al. 2024 (https://doi.org/10.1038/s41559-024-02353-4). </p> <p> </p> <p>Tip labels are formatted as {genbank accession}|{host}|{collection_date}|{country}.</p> <p>Nodel labels are formatted as follows:</p> <ul> <li>rooted_trees_simplified: {node name}|{host}, where {host} is the most likely ancestral state (i.e., highest ancestral state likelihood)</li> </ul> <ul> <li>rooted_trees: {node name}|{host1}:{likelihood1}|{host2}:{likelihood2}...|{hostn}:{likelihoodn}, which provides the raw ancestral state likelihoods for each host state. </li> <li>All node names correspond to those provided in the Supplementary Tables in Tan et al. 2024.</li> </ul> <p> </p> <p> </p>
Linked collectors and determiners for: Systematics, biogeography and host-plant relationships of the Neotropical jumping plant-louse genus Russelliana (Hemiptera: Psylloidea).
Natural history specimen data linked to collectors and determiners held within, "Systematics, biogeography and host-plant relationships of the Neotropical jumping plant-louse genus Russelliana (Hemiptera: Psylloidea)". Claims or attributions were made on Bionomia by volunteer Scribes, <a href="https://bionomia.net/dataset/f4033cfe-28b4-434e-a577-bf51193b4df6">https://bionomia.net/dataset/f4033cfe-28b4-434e-a577-bf51193b4df6</a> using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, <a href="https://gbif.org/dataset/f4033cfe-28b4-434e-a577-bf51193b4df6">https://gbif.org/dataset/f4033cfe-28b4-434e-a577-bf51193b4df6</a>. Formatted as a Frictionless Data package.
Jumping to new hosts: the diversification of flea beetles (Coleoptera: Chrysomelidae: Alticini) in the context of their host plant associations
<p><span>Flea beetles (Alticini) represent one of the most diverse groups within the family Chrysomelidae and are associated with more than 100 different plant families. Conspicuously, only 10 genera account for about a quarter of flea beetle diversity, whereas about 380 genera each comprise less than ten species, indicating different rates of diversification within the Alticini. Here, we reconstructed the phylogenetic relationships of 608 species in 101 Alticini genera using mitogenomes and cytochrome oxidase I, and applied several frameworks of clade-specific diversification rate analyses. Increased diversification rates were consistently detected in the cosmopolitan genera <em>Altica</em> and <em>Longitarsus</em>, the Palearctic genus <em>Phyllotreta</em>, and in neotropical taxa of the subtribe Oedionychina. In addition, we tested whether the evolution of specialized interactions with plants of the order Brassicales influenced the diversification of <em>Phyllotreta</em> and <em>Psylliodes</em> flea beetles. Specialization on Brassicales was only associated with increased diversification rates in <em>Phyllotreta</em> but not in <em>Psylliodes</em>. Our results indicate that host associations per se do not explain different diversification rates and lay the groundwork for investigating the evolutionary drivers of rapid radiations in Alticini.</span></p>
Jumping to new hosts: the diversification of flea beetles (Coleoptera: Chrysomelidae: Alticini) in the context of their host plant associations
Open the record for dataset details and reuse information.
Data from: Shifts in diversification rates and host jump frequencies shaped the diversity of host range among Sclerotiniaceae fungal plant pathogens
The range of hosts that a parasite can infect in nature is a trait determined by its own evolutionary history and that of its potential hosts. However, knowledge on host range diversity and evolution at the family level is often lacking. Here, we investigate host range variation and diversification trends within the Sclerotiniaceae, a family of Ascomycete fungi. Using a phylogenetic framework, we associate diversification rates, the frequency of host jump events, and host range variation during the evolution of this family. Variations in diversification rate during the evolution of the Sclerotiniaceae define three major macro-evolutionary regimes with contrasted proportions of species infecting a broad range of hosts. Host-parasite co-phylogenetic analyses pointed towards parasite radiation on distant hosts long after host speciation (host jump or duplication events) as the dominant mode of association with plants in the Sclerotiniaceae. The intermediate macro-evolutionary regime showed a low diversification rate, high frequency of duplication events, and the highest proportion of broad host range species. Our findings suggest that the emergence of broad host range fungal pathogens results largely from host jumps, as previously reported for oomycete parasites, probably combined with low speciation rates. These results have important implications for our understanding of fungal parasites evolution and are of particular relevance for the durable management of disease epidemics.
FIGURE 35. A in Systematics, biogeography and host-plant relationships of the Neotropical jumping plant-louse genus Russelliana (Hemiptera: Psylloidea)
FIGURE 35. A cladogram of Russelliana spp. based on the data matrix in Table 4, with distribution (Arw = Western Argentina, Are = Eastern Argentina, Bo = Bolivia, Br = Brazil, Cnf = Far Northern Chile (I, II Regions), Cn = Northern Chile (III, IV Regions), Cc = Central Chile (V, Metropolitana, VI Regions), Cs = Southern Chile (VII–X Regions), Csf = Far Southern Chile (XI, XII Regions), P = Peru, U = Uruguay) and available host family information (Ast = Asteraceae, Fab = Fabaceae, Ros = Rosaceae, Sol = Solanaceae, Ver = Verbenaceae). Species clades with missing host/immature data are marked with an asterisk (*). For more information on hosts and distribution see Table 5. Some species clades are numbered from 1 to 18 (see Results and Discussion). Character numbers above the branches and character states are listed in Table 3; full circles indicate uniquely derived character states (synapomorphies/autapomorphies), empty circles correspond to homoplasies.
FIGURE 33 in Systematics, biogeography and host-plant relationships of the Neotropical jumping plant-louse genus Russelliana (Hemiptera: Psylloidea)
FIGURE 33. Russelliana spp., ♀ terminalia, lateral view. A, R. nolanae sp. nov.; B, R. pallida sp. nov.; C, R. punctulata Burckhardt; D, R. queirozae sp. nov.; E, R. rutila sp. nov.; F, R. sebastiani Burckhardt; G, R. setosa sp. nov.; H, R. similis Burckhardt; I, R. solanicola Tuthill. Scale lines = 0.1 mm.
FIGURE 32 in Systematics, biogeography and host-plant relationships of the Neotropical jumping plant-louse genus Russelliana (Hemiptera: Psylloidea)
FIGURE 32. Russelliana spp., ♀ terminalia, lateral view. A, R. lycii (Tuthill); B, R. maculata Burckhardt; C, R. magellanica sp. nov.; D, R. marionae Burckhardt; E, R. melaina sp. nov.; F, R. mendozae sp. nov.; G, R. monticola sp. nov.; H, R. nana sp. nov.; I, R. nigra Burckhardt. Scale lines = 0.1 mm.
FIGURE 34 in Systematics, biogeography and host-plant relationships of the Neotropical jumping plant-louse genus Russelliana (Hemiptera: Psylloidea)
FIGURE 34. Russelliana spp., ♀ terminalia, lateral view. A, R. tetraglochin sp. nov.; B, R. theresae Burckhardt; C, R. vinculipennis Burckhardt; D, R. viscosae sp. nov.; E, R. xantha sp. nov. Scale lines = 0.1 mm.
FIGURE 31 in Systematics, biogeography and host-plant relationships of the Neotropical jumping plant-louse genus Russelliana (Hemiptera: Psylloidea)
FIGURE 31. Russelliana spp., ♀ terminalia, lateral view. A, R. chorizanthis sp. nov.; B, R. didyma sp. nov.; C, R. dimorpha sp. nov.; D, R. diosteae Burckhardt; E, R. disparilis Tuthill; F, R. fabianae Burckhardt; G, R. globosa sp. nov.; H, R. intermedia Burckhardt; I, R. longicauda sp. nov.; J, R. longirostro sp. nov. Scale lines = 0.1 mm.
FIGURE 28 in Systematics, biogeography and host-plant relationships of the Neotropical jumping plant-louse genus Russelliana (Hemiptera: Psylloidea)
FIGURE 28. Russelliana spp., distal segment of aedeagus. A, R. melaina sp. nov.; B, R. mendozae sp. nov.; C, R. monticola sp. nov.; D, R. nana sp. nov.; E, R. nigra Burckhardt; F, R. nolanae sp. nov.; G, R. pallida sp. nov.; H, R. punctulata Burckhardt; I, R. queirozae sp. nov.; J, R. rutila sp. nov.; K, R. sebastiani Burckhardt; L, R. setosa sp. nov. Scale lines = 0.1 mm.
FIGURE 30 in Systematics, biogeography and host-plant relationships of the Neotropical jumping plant-louse genus Russelliana (Hemiptera: Psylloidea)
FIGURE 30. Russelliana spp., ♀ terminalia, lateral view. A, R. adela sp. nov.; B, R. adelpha sp. nov.; C, R. adesmiae Burckhardt; D, R. adunca Burckhardt; E, R. bicolorata sp. nov.; F, R. brevigenis sp. nov.; G, R. bulbosa Burckhardt; H, R. capsici Burckhardt; I, R. caunda sp. nov.; J, R. chilensis Burckhardt. Scale lines = 0.1 mm.
FIGURE 29 in Systematics, biogeography and host-plant relationships of the Neotropical jumping plant-louse genus Russelliana (Hemiptera: Psylloidea)
FIGURE 29. Russelliana spp., distal segment of aedeagus. A, R. similis Burckhardt; B, R. solanicola Tuthill; C, R. tetraglochin sp. nov.; D, R. theresae Burckhardt; E, R. vinculipennis Burckhardt; F, R. viscosae sp. nov.; G, R. xantha sp. nov. Scale lines = 0.1 mm.
FIGURE 27 in Systematics, biogeography and host-plant relationships of the Neotropical jumping plant-louse genus Russelliana (Hemiptera: Psylloidea)
FIGURE 27. Russelliana spp., distal segment of aedeagus. A, R. dimorpha sp. nov.; B, R. diosteae Burckhardt; C, R. disparilis Tuthill; D, R. fabianae Burckhardt; E, R. globosa sp. nov.; F, R. intermedia Burckhardt; G, R. longicauda sp. nov.; H, R. longirostro sp. nov.; I, R. lycii (Tuthill); J, R. maculata Burckhardt; K, R. magellanica sp. nov.; L, R. marionae Burckhardt. Scale lines = 0.1 mm.
FIGURE 25 in Systematics, biogeography and host-plant relationships of the Neotropical jumping plant-louse genus Russelliana (Hemiptera: Psylloidea)
FIGURE 25. Russelliana spp., paramere, inner face. A, R. similis Burckhardt; B, R. solanicola Tuthill; C, R. tetraglochin sp. nov.; D, R. theresae Burckhardt; E, R. vinculipennis Burckhardt; F, R. viscosae sp. nov.; G, R. xantha sp. nov. Scale lines = 0.1 mm.
FIGURE 26 in Systematics, biogeography and host-plant relationships of the Neotropical jumping plant-louse genus Russelliana (Hemiptera: Psylloidea)
FIGURE 26. Russelliana spp., distal segment of aedeagus. A, R. adela sp. nov.; B, R. adelpha sp. nov.; C, R. adesmiae Burckhardt; D, R. adunca Burckhardt; E, R. bicolorata sp. nov.; F, R. brevigenis sp. nov.; G, R. bulbosa Burckhardt; H, R. capsici Burckhardt; I, R. caunda sp. nov.; J, R. chilensis Burckhardt; K, R. chorizanthis sp. nov.; L, R. didyma sp. nov. Scale lines = 0.1 mm.
FIGURE 24 in Systematics, biogeography and host-plant relationships of the Neotropical jumping plant-louse genus Russelliana (Hemiptera: Psylloidea)
FIGURE 24. Russelliana spp., paramere, inner face. A, R. nana sp. nov.; B, R. nigra Burckhardt; C, R. nolanae sp. nov.; D, R. pallida sp. nov.; E, R. punctulata Burckhardt; F, R. queirozae sp. nov.; G, R. rutila sp. nov.; H, R. sebastiani Burckhardt; I, R. setosa sp. nov. Scale lines = 0.1 mm.
FIGURE 22 in Systematics, biogeography and host-plant relationships of the Neotropical jumping plant-louse genus Russelliana (Hemiptera: Psylloidea)
FIGURE 22. Russelliana spp., paramere, inner face. A, R. chilensis Burckhardt; B, R. chorizanthis sp. nov.; C, R. didyma sp. nov.; D, R. dimorpha sp. nov.; E, R. diosteae Burckhardt; F, R. disparilis Tuthill; G, R. fabianae Burckhardt; H, R. globosa sp. nov.; I, R. intermedia Burckhardt. Scale lines = 0.1 mm.
FIGURE 20 in Systematics, biogeography and host-plant relationships of the Neotropical jumping plant-louse genus Russelliana (Hemiptera: Psylloidea)
FIGURE 20. Russelliana spp., ♂ terminalia, lateral view. A, R. similis Burckhardt; B, R. solanicola Tuthill; C, R. tetraglochin sp. nov.; D, R. theresae Burckhardt; E, R. vinculipennis Burckhardt; F, R. viscosae sp. nov.; G, R. xantha sp. nov. Scale lines = 0.1 mm.
FIGURE 19 in Systematics, biogeography and host-plant relationships of the Neotropical jumping plant-louse genus Russelliana (Hemiptera: Psylloidea)
FIGURE 19. Russelliana spp., ♂ terminalia, lateral view. A, R. nana sp. nov.; B, R. nigra Burckhardt; C, R. nolanae sp. nov.; D, R. pallida sp. nov.; E, R. punctulata Burckhardt; F, R. queirozae sp. nov.; G, R. rutila sp. nov.; H, R. sebastiani Burckhardt; I, R. setosa sp. nov. Scale lines = 0.1 mm.
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