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ShareScore release 0.9.0
Dataset results
5 results for “human connectome project”
Human Connectome Project (HCP) Intrahemispheric FC
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GSDGM files generated by human connectome project s500 rs-fMRI (CONN atlas 132 ROIs) data
<p>Group Surrogate Data Generating Model (GSDGM) dataset generated by human connectome project s500 rs-fMRI (CONN atlas 132 ROIs) data.</p>
Data from: Diffantom: whole-brain diffusion MRI phantoms derived from real datasets of the Human Connectome Project
Diffantom is a whole-brain diffusion MRI (dMRI) phantom publicly available through the Dryad Digital Repository (doi:10.5061/dryad.4p080). The dataset contains two single-shell dMRI images, along with the corresponding gradient information, packed following the BIDS standard (Brain Imaging Data Structure, Gorgolewski et al., 2015). The released dataset is designed for the evaluation of the impact of susceptibility distortions and benchmarking existing correction methods. In this Data Report we also release the software instruments involved in generating diffantoms, so that researchers are able to generate new phantoms derived from different subjects, and apply these data in other applications like investigating diffusion sampling schemes, the assessment of dMRI processing methods, the simulation of pathologies and imaging artifacts, etc. In summary, Diffantom is intended for unit testing of novel methods, cross-comparison of established methods, and integration testing of partial or complete processing flows to extract connectivity networks from dMRI.
Data from: Diffantom: whole-brain diffusion MRI phantoms derived from real datasets of the Human Connectome Project
Open the record for dataset details and reuse information.
Human Connectome Project resting-state fMRI Connectivity Matrices (Young Adult + Aging)
<p>This database contains the connectivity matrices of the resting-state functional MRI scans that were collected in two databases of the Human Connectome Project, Young Adult and Aging. These matrices contain the functional connectivity between brain regions (here, several different brain atlases were used, leading to several different connectivity matrices for each subject). The connectivity matrices are symmetrical <em>n x n </em>matrices. Here, <em>n</em><em> </em>indicates the number of regions present in the atlas, and any number <em>n<sub>i,j </sub></em>in the matrix is generated by calculating a simple Pearson correlation coefficient between the functional time series that describe the functional activation of regions <em>i </em>and <em>j</em> throughout the resting-state functional scan. The matrices presented in this database are present as .pconn.nii files (which can be handled using software like wb_command) or as .txt file. </p> <p>A full explanation of the database and the brain atlases used here, as well as all the scripts used to generate these connectivity matrices can be found on the GitHub page of this project: <a href="https://github.com/floristijhuis/HCP-rfMRI-repository">floristijhuis/HCP-rfMRI-repository (github.com)</a>.</p>
ScienceDex guides
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.