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39 results for “lipoxygenase”
Datasets of "Lipoxygenase (LOX) genes in angiosperms: a comparative genome-wide analysis"
<p>This dataset contain protein subcellular localization results and FASTA files containing coding sequences (CDS) and protein sequences used for all phylogenetic analyses of the study " Lipoxygenase (LOX) genes in angiosperms: a comparative genome-wide analysis" (submitted).</p>
Molecular Targeting of 15-Lipoxygenase-1 (15-LOX-1) for Apoptosis Induction in Human Colorectal Cancers
ClinicalTrials.gov study NCT00503035. IPD Sharing: Not stated. Countries: 1. Publications: 2.
Fig. 3 in Lipoxygenase pathway in model bryophytes: 12-oxo-9(13),15-phytodienoic acid is a predominant oxylipin in Physcomitrella patens
Fig. 3. The proposed pathways of biosynthesis of major cyclopentenones in P. patens and M. polymorpha. β oxn, β oxidation.
Fig. 2 in Lipoxygenase pathway in model bryophytes: 12-oxo-9(13),15-phytodienoic acid is a predominant oxylipin in Physcomitrella patens
Fig. 2. The electron impact mass spectra and fragmentation schemes (insets) for products 1 (A), 2 (B), and 3 (C).
Fig. 6 in Mobilization of storage lipid reserve and expression analysis of lipase and lipoxygenase genes in rice (Oryza sativa var. Pusa Basmati 1) bran during germination
Fig. 6. Expression analysis of rice bran lipase genes using quantitative RT PCR (qRT PCR) during 2 HAI, 1, 2, 4, 6, and 8 DAI. Expression value at 0 HAI was taken as control while elongation factor 1-alpha (EF1A, accession no.: XM_015774317.2) was used as the reference gene to normalize the expression level of lipases used in this study. Bars represent means ± standard deviation (SD) of 3 biological replicates. HAI, hours after imbibition; DAI, days after imbibition.
Fig. 5 in Mobilization of storage lipid reserve and expression analysis of lipase and lipoxygenase genes in rice (Oryza sativa var. Pusa Basmati 1) bran during germination
Fig. 5. Schematic representation of the conserved motifs in (a) OsLip proteins and (b) OsLOX proteins. Each colored box represents a motif in the respective protein sequence. Motif number and color codes indicate the sequence of the conserved motif. (For interpretation of the references to color in this figure legend, the reader is referred to the Web version of this article.)
Fig. 1 in Mobilization of storage lipid reserve and expression analysis of lipase and lipoxygenase genes in rice (Oryza sativa var. Pusa Basmati 1) bran during germination
Fig. 1. Lipid and FA content in bran of germinating rice grains. (a) Lipid content in bran tissues (b) FA profiles of TAGs (c) FA profiles of DAGs (d) FA profiles of NEFAs and (e) FA profiles of PLs. TAG, Triacylglycerol; DAG, diacylglycerol; NEFA, non-esterified fatty acid; PL, polar lipid. Results are mean values ± SD of three replicates.
Fig. 1 in Lipoxygenase pathway in model bryophytes: 12-oxo-9(13),15-phytodienoic acid is a predominant oxylipin in Physcomitrella patens
Fig. 1. The GC-MS oxylipin profiles of P. patens (A, B) and M. polymorpha (C, D). A and C, the profiles of endogenous oxylipins (Me/TMSi), the mixed ion current chromatograms (m/z 149, 177, 210, 225, 238, 278, 306, 308, 311). B and D, profiles of oxylipins (Me/TMSi) biosynthesized upon the in vitro preincubations of P. patens and M. polymorpha with α linolenic acid. The experimental details are described under "Experimental".
Fig. 7 in Mobilization of storage lipid reserve and expression analysis of lipase and lipoxygenase genes in rice (Oryza sativa var. Pusa Basmati 1) bran during germination
Fig. 7. Expression analysis of rice bran LOX genes using quantitative RT PCR (qRT PCR) during 2 HAI, 1, 2, 4, 6, and 8 DAI. Expression value at 0 HAI was taken as control while elongation factor 1-alpha (EF1A, accession no.: XM_015774317.2) was used as the reference gene to normalize the expression level of LOXs used in this study. Bars represent means ± standard deviation (SD) of 3 biological replicates. HAI, hours after imbibition; DAI, days after imbibition.
Fig. 4 in Mobilization of storage lipid reserve and expression analysis of lipase and lipoxygenase genes in rice (Oryza sativa var. Pusa Basmati 1) bran during germination
Fig. 4. Exon/intron organization of (a) OsLip genes [Exons (green boxes), Introns (red lines)] and (b) OsLOX genes [Exons (pink boxes), Introns (grey lines)]. (For interpretation of the references to color in this figure legend, the reader is referred to the Web version of this article.)
Fig. 3 in Mobilization of storage lipid reserve and expression analysis of lipase and lipoxygenase genes in rice (Oryza sativa var. Pusa Basmati 1) bran during germination
Fig. 3. Phylogenetic analysis of rice LOXs. Neighbor-joining (NJ) estimates (with 1000 bootstrap replicates) the phylogenetic relationship between rice and Arabidopsis LOX proteins. Labels are depicted in green for the 9-LOX clade, in blue for 13-LOX clade. Bootstrap values are mentioned in the branches. Branch length is indicated by the scale bar. The Arabidopsis Information Resource (TAIR) and Rice genome annotation project (RGAP) accession numbers are indicated with species names of the lipase proteins. Os, Oryza sativa; At, Arabidopsis thaliana. (For interpretation of the references to color in this figure legend, the reader is referred to the Web version of this article.)
Fig. 2 in Mobilization of storage lipid reserve and expression analysis of lipase and lipoxygenase genes in rice (Oryza sativa var. Pusa Basmati 1) bran during germination
Fig. 2. Phylogenetic analysis of rice lipases (Lip). Neighbor-joining (NJ) estimates (with 1000 bootstrap replicates) the phylogenetic relationship between rice and Arabidopsis lipase proteins. AtLip are depicted in green box and six OsLip candidates selected for the study based on the tree are depicted in blue box. Bootstrap values are mentioned in the branches. Branch length is indicated by the scale bar. The Arabidopsis Information Resource (TAIR) and Rice genome annotation project (RGAP) accession numbers are indicated with species names of the lipase proteins. Os, Oryza sativa; At, Arabidopsis thaliana; SDP1, sugar dependent1. (For interpretation of the references to color in this figure legend, the reader is referred to the Web version of this article.)
Fig. 5 in Study of two isoforms of lipoxygenase by kinetic assays, docking and molecular dynamics of a specialised metabolite isolated from the aerial portion of Lithrea caustica (Anacardiaceae) and its synthetic analogs
Fig. 5. Active site of molecular dynamics between 3-pentadecylcatechol (2) (A), (Z)-3-(pentadec-10′-enyl)-catechol (1) (B), and arachidonic acid with 5-hLOX and fluctuation of catechol distances during simulation time (10 ns).
Role of 12-lipoxygenase in Platelet Reactivity and Type 2 Diabetes Mellitus
ClinicalTrials.gov study NCT02629497. IPD Sharing: NO. Countries: 1. Publications: 1.
Fig. 4 in Study of two isoforms of lipoxygenase by kinetic assays, docking and molecular dynamics of a specialised metabolite isolated from the aerial portion of Lithrea caustica (Anacardiaceae) and its synthetic analogs
Fig. 4. (Z)-3-(pentadec-10′-enyl)-catechol (1) and 3-pentadecylcatechol (2) Lineweaver-Burk graphs.
Fig. 1 in Study of two isoforms of lipoxygenase by kinetic assays, docking and molecular dynamics of a specialised metabolite isolated from the aerial portion of Lithrea caustica (Anacardiaceae) and its synthetic analogs
Fig. 1. Basic structure of urushiol.
Study of the Arachidonate 5-Lipoxygenase Enzyme in Affecting the Risk for Coronary Heart Disease
ClinicalTrials.gov study NCT00379808. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Modulation of microRNA processing by 5-lipoxygenase
GEO Series GSE152901. Homo sapiens. 12 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Knock-out of 5-lipoxygenase in overexpressing tumor cells – consequences on gene expression and cellular function
GEO Series GSE197947. Homo sapiens. 42 samples. Type: Expression profiling by high throughput sequencing.
Human 5-lipoxygenase regulates transcription by association to euchromatin [FAIRE-seq]
GEO Series GSE200332. Homo sapiens. 24 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
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