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272
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ShareScore release 0.9.0
Dataset results
272 results for “long non-coding RNAs”
Data from: Transcriptomic meta-analysis reveals unannotated long non-coding RNAs related to the immune response in sheep
<p>This dataset contains additional files from the manuscript: "Transcriptomic meta-analysis reveals unannotated long non-coding RNAs related to the immune response in sheep".</p> <p>The files included are:</p> <p>- All novel lncRNA transcript annotation GTF file ( lncrnas.gtf )</p> <p>- High-confidence lncRNA gene annotation GTF file ( lncrnas_evidence.gtf )</p> <p>- All novel lncRNA transcript annotation GTF file remapped to the ARS-UI_Ramb_v2.0 genome ( lncrnas_remapped_v2.gtf )</p> <p>- Raw count estimates of the extended annotation ( rawcounts.csv )</p> <p>- TPM values of the extended annotation ( tpmcounts.csv )</p> <p>- Supplementary data to the published article (.xlsx, .pdf)</p> <p> </p>
Training data for 'Long non-coding RNAs (lncRNAs) annotation with FEELnc' tutorial (Galaxy Training Material)
<p>Data needed for the 'Long non-coding RNAs (lncRNAs) annotation with FEELnc' tutorial (Galaxy Training Material).<br>The assembly was generated following the 'Genome assembly using PacBio data' tutorial.<br>The annotation was generated following the 'Genome annotation with Funannotate ' tutorial.</p> <p>The bam file is RNASeq SRR8534859_1.fastq.gz and SRR8534859_2.fastq.gz mapping on the genome assembly.</p>
Transcriptional kinetics and molecular functions of long non-coding RNAs
<p>R code, R markdowns and data (count tables) for the analysis described in 'Transcriptional kinetics and molecular functions of long non-coding RNAs'. Code and data is also available at https://github.com/sandberg-lab/lncRNAs_bursting.</p>
Supplementary Materials for Evaluation role of ferroptosis long non-coding RNAs for immune microenvironment and microsatellite instability in colon cancer
<p>Supplementary Materials for "Evaluation role of ferroptosis long non-coding RNAs for immune microenvironment and microsatellite instability in colon cancer"</p>
The Role of Long Non-coding RNAs WRAP53 and UCA-1 as Potential Biomarkers in Diagnosis of Hepatocellular Carcinoma
ClinicalTrials.gov study NCT05088811. IPD Sharing: NO. Countries: 1. Publications: 4.
De novo profiling of long non-coding RNAs involved in MC-LR–induced liver injury in whitefish: discovery and perspectives
Open the record for dataset details and reuse information.
Data from: Genome-wide discovery and characterization of maize long non-coding RNAs
Open the record for dataset details and reuse information.
Data from: Genome-wide differential expression of synaptic long non-coding RNAs in autism spectrum disorder
Open the record for dataset details and reuse information.
Total RNA sequencing in multiple Sus Scrofa tissues reveals novel long non-coding RNAs functioning in skeletal muscle development
GEO Series GSE73763. Sus scrofa. 13 samples. Type: Expression profiling by high throughput sequencing.
Differential Expression of Super-enhancer-associated Long Non-coding RNAs in Uterine Leiomyomas
GEO Series GSE193320. Homo sapiens. 16 samples. Type: Expression profiling by array; Non-coding RNA profiling by array.
Analysis of long non-coding RNAs highlights tissue-specific expression patterns and epigenetic profiles in normal and psoriatic skin
GEO Series GSE63979. Homo sapiens. 42 samples. Type: Expression profiling by high throughput sequencing.
Expression profiles of long non-coding RNAs in neurogenic bladder of spinal cord injured rats: A transcriptomic analysis
GEO Series GSE197544. Rattus norvegicus. 12 samples. Type: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing.
Dysregulated long non-coding RNAs and genes in calcified aortic valve disease
GEO Series GSE233819. Homo sapiens. 4 samples. Type: Expression profiling by array; Non-coding RNA profiling by array.
Insights from long non-coding RNAs profiling of beta cells undergoing high glucose/palmitate -induced glucolipotoxicity
GEO Series GSE124833. Rattus norvegicus. 6 samples. Type: Expression profiling by high throughput sequencing.
Single cell analysis of long non-coding RNAs in the developing human neocortex
GEO Series GSE71315. Homo sapiens. 242 samples. Type: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing.
The anti-cancer drug 5-fluorouracil affects cell cycle regulators and potential regulatory long non-coding RNAs in yeast
GEO Series GSE77511. Saccharomyces cerevisiae. 12 samples. Type: Expression profiling by high throughput sequencing.
Type I interferon regulates the expression of long non-coding RNAs [RNA-seq]
GEO Series GSE64795. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
LED, a long non-coding RNA activator of enhancer RNAs, is hypermethylated in human cancers
GEO Series GSE53499. Homo sapiens. 21 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Long non-coding RNAs expressed in pituitary development and specific cell types
GEO Series GSE277389. Mus musculus. 6 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Gene expression profiling of long non-coding RNAs between rainbow trout strains on plant-based diets
GEO Series GSE85104. Oncorhynchus mykiss. 20 samples. Type: Non-coding RNA profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.