Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
101
datasets available to search
ShareScore release 0.9.0
Dataset results
101 results for “long-range interactions”
Nanoparticle clustering in supraparticles to control magnetic long-range interactions
<p>This data publication is based on the metadata and datasets underlying the manuscript: Nanoparticle clustering in supraparticles to control magnetic long-range interactions</p> <p>To tailor superparamagnetic iron oxide nanoparticles (SPIONs) to the specific needs of diverse application fields, it is essential to understand not only their intrinsic properties but also their interactions with each other. Theoretical models predicting/explaining the magnetization behavior of macroscopic samples containing millions of SPIONs are intricate due to the complexity of the underlying relaxation mechanisms in alternating fields. This study introduces supraparticles (SPs) as model architectures to empirically investigate magnetic interactions within and between large SPION clusters (> 100 nanoparticles). For this purpose, nanoparticle dispersions containing SPIONs and silica nanoparticles (SiO<sub>2</sub> NPs) as non‐magnetic building blocks are spray‐dried to form binary SPs. Selective salt‐induced agglomeration of the two building block types before spray‐drying is utilized to tailor SP architectures, including control over SPION cluster size, shape, and proximity. Magnetic particle spectroscopy (MPS), operating under ambient conditions, reveals altered magnetization behavior for different cluster structures. Not only the nearest SPION neighbors, but the whole cluster structure up to several micrometers is decisive for the magnetization behavior. This highlights the importance of long‐range magnetic interactions. This work presents a versatile approach for designing model architectures to advance empirical interaction studies between SPIONs in macroscopic samples.</p>
Data of the publication "Hydrodynamics in long-range interacting systems with center-of-mass conservation"
<p>In systems with a conserved density, the additional conservation of the center of mass (dipole moment) has been shown to slow down the associated hydrodynamics. At the same time, long-range interactions generally lead to faster transport and information propagation. Here, we explore the competition of these two effects and develop a hydrodynamic theory for long-range center-of-mass-conserving systems. We demonstrate that these systems can exhibit a rich dynamical phase diagram containing subdiffusive, diffusive, and superdiffusive behaviors, with continuously varying dynamical exponents. We corroborate our theory by studying quantum lattice models whose emergent hydrodynamics exhibit these phenomena.</p>
Raw data to "Quantum-critical and dynamical properties of the XXZ bilayer with long-range interactions"
<div> <p>This directory contains the data used to generate the numerical results in the work "Quantum-critical and dynamical properties of the XXZ bilayer with long-range interactions [1]".</p> <p>To get an overview of the organization of the directory and a description of the data we recommend the README.md file.</p> <p>[1]: P. Adelhardt, A. Duft and K. P. Schmidt, Quantum-critical and dynamical properties of the XXZ bilayer with long-range interactions, <a href="https://arxiv.org/abs/2408.13145">arXiv:2408.13145</a></p> <p> </p> </div>
Neural relational inference to learn long-range allosteric interactions in proteins from molecular dynamics simulations
<p>MD simulations used in the studies of the publication "<strong>Neural relational inference to learn long-range allosteric interactions in proteins from molecular dynamics simulations</strong>"</p>
Antipsychotic drugs selectively decorrelate long-range interactions in deep cortical layers
<p>All raw data and Matlab code necessary to produce the figures of https://elifesciences.org/reviewed-preprints/86805</p>
Raw data from the pCUT+MC approach for the antiferromagnetic Heisenberg square lattice bilayer model with (non-frustrating) long-range interactions
<p>This directory contains the data from the pCUT+MC approach for the antiferromagnetic Heisenberg square lattice bilayer model with (non-frustrating) long-range interactions.</p> <p>To get an overview of the organization of the directory and a description of the data we recommend the README.md file.</p> <p>The data is published in P. Adelhardt, J. A. Koziol, A. Langheld, and K. P. Schmidt, "Monte Carlo based techniques for quantum magnets with long-range interactions", <a href="https://arxiv.org/abs/2403.00421">arXiv:2403.00421</a></p>
Data for "Long-range electron-electron interactions in quantum dot systems and applications in quantum chemistry"
<p>This dataset contains the data files and plotting scripts for figures of "Long-range electron-electron interactions in quantum dot systems and applications in quantum chemistry".</p> <p>Questions can be addressed to: johannes.knoerzer@eth-its.ethz.ch and c.j.vandiepen@tudelft.nl</p>
Data for "Long-range interacting systems are locally non-interacting"
<div> <div>This dataset contains the code, data and figures for the dissipative quench described in the manuscript "Long-range interacting systems are locally non-interacting".</div> </div>
Supplementary data for paper "RNA in situ conformation sequencing reveals novel long-range RNA interactions that impact splicing"
<p>Supplementary data for paper "RNA in situ conformation sequencing reveals novel long-range RNA structures with impact on splicing".</p> <p>Data showing support for PCCR (<a href="https://www.nature.com/articles/s41467-021-22549-7">paper</a>) in RIC-seq data (<a href="https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE190214">archive</a>).</p> <p> </p> <p>S1: for each supported PCCR lists numbers of experiments with inner and outer support and number of supporting reads in each experiment</p> <p>S2: for select PCCR lists supporting and non-supporting cell lines, total number of supporting reads and mean PSI in each group, and difference in mean PSI between the groups</p>
MAPS: model-based analysis of long-range chromatin interactions from PLAC-seq and HiChIP experiments
GEO Series GSE119663. Mus musculus. 10 samples. Type: Other; Genome binding/occupancy profiling by high throughput sequencing.
Dynamic regulation of histone modifications and long-range chromosomal interactions during post-mitotic transcriptional reactivation
GEO Series GSE141139. Homo sapiens. 114 samples. Type: Other; Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Su(Hw) interacts with Combgap to establish long-range chromatin contacts
GEO Series GSE231576. Drosophila melanogaster. 18 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
MAPT expression is regulated by long-range interactions with cis-regulatory elements [ChIP-seq]
GEO Series GSE228116. Homo sapiens. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Epigenetic therapy suppresses tumour growth by rewiring ER-mediated long-range chromatin interactions in ER+ endocrine-resistant breast cancer [methylation GAR15-13]
GEO Series GSE171066. Homo sapiens. 8 samples. Type: Methylation profiling by array.
MAPT expression is mediated by long-range interactions with cis-regulatory elements [scMultiomics]
GEO Series GSE228120. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Comprehensive mapping of long-range interactions reveals folding principles of the human genome.
GEO Series GSE18199. Homo sapiens. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
MAPT expression is mediated by long-range interactions with cis-regulatory elements [RNA-seq]
GEO Series GSE228115. Homo sapiens. 384 samples. Type: Expression profiling by high throughput sequencing.
CAPTURE-3C-seq analysis of locus-specific long-range DNA interactions in HeLa stable cells expressing LAMPS and sgHS2
GEO Series GSE180547. Homo sapiens. 23 samples. Type: Other.
Dynamic regulation of histone modifications and long-range chromosomal interactions during post-mitotic transcriptional reactivation [ChIP-seq]
GEO Series GSE141081. Homo sapiens. 60 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
KSHV chromatin looping facilitates effective gene expression: high-resolution mapping of long-range chromatin interactions in the KSHV genome [Hi-C]
GEO Series GSE99946. Homo sapiens. 4 samples. Type: Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.