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702 results for “longitudinal study”
Long-term immunity against yellow fever in children vaccinated during infancy: a longitudinal cohort study
<p>The data represent the concentrations of specific neutralizing antibodies following infant immunization against yellow fever. We used a microneutralization assay to measure protective antibodies against yellow fever virus in 587 Malian and 436 Ghanaian children vaccinated around age 9 months, and followed for 4.5 years (Mali), or 2.5 and 6 years (Ghana). We standardized antibody concentrations with reference to the yellow fever WHO International Standard.</p> <p>The serum samples used in this study, and the sample metadata included in the present dataset originate from trials of the meningococcal group A conjugate vaccine, MenAfriVac, namely the PsATT-004 (phase II) and Pers-004 (phase IV) studies in Ghana, and the PsATT-007 (phase III) and Pers-007 (phase IV) studies in Mali (clinical trial registry numbers ISRCTN82484612, ISRCTN10763234, PACTR201110000328305, and ISRCTN37623829). MenAfriVac was developed by PATH and Serum Institute India Pvt. Ltd. (SIIPL).</p> <p>This dataset consists of three files:</p> <p>1. Ghana group data | Tab-delimited text file: Yellow_fever_nAb_Ghana.csv</p> <p>2. Mali group data | Tab-delimited text file: Yellow_fever_nAb_Mali.csv</p> <p>3. Data dictionary | PDF file: Yellow_fever_nAb_Data_Dictionary.pdf</p> <p> </p> <p> </p> <p> </p> <p> </p> <p> </p>
[Dataset] Stroke Caregiver Burden in East Coast Peninsular Malaysia, A Short-term Longitudinal Study
<p>Raw dataset for study entitled "INFORMAL CAREGIVERS BURDEN AMONG STROKE PATIENTS IN EAST-COAST MALAYSIA: A SHORT-TERM LONGITUDINAL STUDY"</p> <p>This study is part of study funded by Newton Ungku Omar Fund (2020-2021) under grant for “A Scalable Solution for Supporting Informal Stroke Caregivers in Malaysia: Systematic Development and Feasibility Study” Malaysian Ministry of Education (203.PPSP.678003) and Medical Research Council, United Kingdom (MR/T018968/1).</p> <p>Please note that this data is in raw csv form, imported from REDCap. due to REDCap system, the raw file need to be relabel and relevel to reflect the original score or response.</p> <p>Data dictionary provided for data relabel and relevel purpose.</p> <p>R script also available to convert the raw csv into dataset with appropriate label and level</p> <p> </p> <p> </p>
Dataset Musculoskeletal pain in health professionals at the end of their studies and 1 year after entry into the profession: A multi-center longitudinal study.
<p>Dataset related to the paper "Musculoskeletal pain in health professionals at the end of their studies and 1 year after entry into the profession: A multi-center longitudinal study."</p> <p><strong>Abstract</strong></p> <p>Background: Musculoskeletal pain, especially back pain, is common among health professionals (HPs). They reduce work productivity and cause high costs. This follow up study investigates the prevalence and individual course of Musculoskeletal pain among HP students at the end of their studies and one year after entering the health care workforce. Participants were asked whether their Musculoskeletal pain was related to study or work conditions.</p> <p>Method: Self reported one year prevalence for lower back pain, neck and shoulder pain, pain in arms or hands, and pain in legs or feet was collected by an online questionnaire at two timepoints from 1046 participating HPs. Generalized estimating equation (GEE) models of the binomial family with log link were employed to estimate adjusted prevalence and corresponding normal based 95% confidence intervals were derived using the bootstrap method with 1,000 replications.</p> <p>Results: Prevalence of lower back pain as well as neck and shoulder pain was very high at baseline and follow up in all students and later HPs. Prevalence for pain in arms or hands, legs or feet was lower and there were significant differences between the professions. HP associated their lower back pain and neck and shoulder pain clearly with study and work conditions; HPs linked pain in arms or hands, legs or feet strongly with work conditions only.</p> <p>Conclusion: The prevention of lower back pain and neck and shoulder pain must be included in the curricula of all health professions at universities. As best practice example, they should incorporate ergonomic measures and exercises as a daily routine of the formation of health professionals. The impact of physically demanding professional tasks on upper and lower extremities needs to be investigated in further studies in order to take preventive measures.</p>
Minimal data set for "Cohort profile: The ENTWINE iCohort Study, a multinational longitudinal web-based study of informal care"
<p><strong>Title:</strong></p> <p>Minimal Data Set for the Reproduction of Findings in "Elayan et al., Cohort Profile: The ENTWINE iCohort Study, a Multinational Longitudinal Web-Based Study of Informal Care".</p> <p> </p> <p><strong>Study Summary:</strong></p> <p>The data sets provided herein are derived from the ENTWINE iCohort Study, a multinational web-based cohort study employing an intensive longitudinal design. The study integrates a two-wave panel survey (baseline and 6-month follow-up) with optional weekly diary assessments. The cohort comprises caregivers and care recipients from nine countries: the United Kingdom, the Netherlands, Italy, Sweden, Israel, Germany, Greece, Poland, and Ireland. The study aimed to examine the influence of personal, psychological, social, economic, and geographic factors on caregiving experiences.</p> <p>Participants were eligible if they met the following criteria: 1) residency in a participating country; 2) capability to respond to surveys in English, Swedish, German, Dutch, Italian, Greek, Hebrew, or Polish; 3) access to the internet and ability to use it; 4) at least 18 years of age; 5) self-declared cognitive and physical capacity to complete the surveys; 6) either providing care to an adult (aged ≥ 18 years) with a chronic health condition, disability, or other care need, or receiving care from an adult due to similar conditions.</p> <p>The detailed methodology and results of the study can be found in the associated manuscript. For the complete survey questionnaires, please refer to: Morrison V, Zarzycki M, Vilchinsky N, Sanderman R, Lamura G, Fisher O, et al. A Multinational Longitudinal Study Incorporating Intensive Methods to Examine Caregiver Experiences in the Context of Chronic Health Conditions: Protocol of the ENTWINE-iCohort. Int J Environ Res Public Health. 2022;19. doi: <a href="https://doi.org/10.3390/ijerph19020821">10.3390/ijerph19020821</a></p> <p> </p> <p><strong>Data files:</strong></p> <p>The repository contains the following data files:</p> <ol> <li>"cg_minimal_dataset" (available in dta, sav, rds, and xlsx formats): This is a minimal data set containing de-identified and processed data derived from the ENTWINE iCohort Caregiver Baseline Survey. The variables present in this data set are detailed in the associated codebook, "cg_minimal_dataset_codebook".</li> <li>"cr_minimal_dataset" (available in dta, sav, rds, and xlsx formats): This is a minimal data set containing de-identified and processed data derived from the ENTWINE iCohort Care Recipient Baseline Survey. The variables present in this data set are detailed in the associated codebook, "cr_minimal_dataset_codebook".</li> </ol>
Albero study: a longitudinal database of the social network and personal networks of a cohort of students at the end of high school
<p><strong>ABSTRACT</strong></p> <p>The Albero study analyzes the personal transitions of a cohort of high school students at the end of their studies. The data consist of (a) the longitudinal social network of the students, before (n = 69) and after (n = 57) finishing their studies; and (b) the longitudinal study of the personal networks of each of the participants in the research. The two observations of the complete social network are presented in two matrices in Excel format. For each respondent, two square matrices of 45 alters of their personal networks are provided, also in Excel format. For each respondent, both psychological sense of community and frequency of commuting is provided in a SAV file (SPSS). The database allows the combined analysis of social networks and personal networks of the same set of individuals.</p> <p><strong>INTRODUCTION</strong></p> <p>Ecological transitions are key moments in the life of an individual that occur as a result of a change of role or context. This is the case, for example, of the completion of high school studies, when young people start their university studies or try to enter the labor market. These transitions are turning points that carry a risk or an opportunity (Seidman & French, 2004). That is why they have received special attention in research and psychological practice, both from a developmental point of view and in the situational analysis of stress or in the implementation of preventive strategies.</p> <p>The data we present in this article describe the ecological transition of a group of young people from Alcala de Guadaira, a town located about 16 kilometers from Seville. Specifically, in the “Albero” study we monitored the transition of a cohort of secondary school students at the end of the last pre-university academic year. It is a turning point in which most of them began a metropolitan lifestyle, with more displacements to the capital and a slight decrease in identification with the place of residence (Maya-Jariego, Holgado & Lubbers, 2018).</p> <p>Normative transitions, such as the completion of studies, affect a group of individuals simultaneously, so they can be analyzed both individually and collectively. From an individual point of view, each student stops attending the institute, which is replaced by new interaction contexts. Consequently, the structure and composition of their personal networks are transformed. From a collective point of view, the network of friendships of the cohort of high school students enters into a gradual process of disintegration and fragmentation into subgroups (Maya-Jariego, Lubbers & Molina, 2019).</p> <p>These two levels, individual and collective, were evaluated in the “Albero” study. One of the peculiarities of this database is that we combine the analysis of a complete social network with a survey of personal networks in the same set of individuals, with a longitudinal design before and after finishing high school. This allows combining the study of the multiple contexts in which each individual participates, assessed through the analysis of a sample of personal networks (Maya-Jariego, 2018), with the in-depth analysis of a specific context (the relationships between a promotion of students in the institute), through the analysis of the complete network of interactions. This potentially allows us to examine the covariation of the social network with the individual differences in the structure of personal networks.</p> <p><strong>PARTICIPANTS</strong></p> <p>The social network and personal networks of the students of the last two years of high school of an institute of Alcala de Guadaira (Seville) were analyzed. The longitudinal follow-up covered approximately a year and a half. The first wave was composed of 31 men (44.9%) and 38 women (55.1%) who live in Alcala de Guadaira, and who mostly expect to live in Alcala (36.2%) or in Seville (37.7%) in the future. In the second wave, information was obtained from 27 men (47.4%) and 30 women (52.6%).</p> <p><strong>DATE STRUCTURE AND ARCHIVES FORMAT</strong></p> <p>The data is organized in two longitudinal observations, with information on the complete social network of the cohort of students of the last year, the personal networks of each individual and complementary information on the sense of community and frequency of metropolitan movements, among other variables.</p> <p><strong>Social network</strong></p> <p>The file “Red_Social_t1.xlsx” is a valued matrix of 69 actors that gathers the relations of knowledge and friendship between the cohort of students of the last year of high school in the first observation. The file “Red_Social_t2.xlsx” is a valued matrix of 57 actors obtained 17 months after the first observation.</p> <p>The data is organized in two longitudinal observations, with information on the complete social network of the cohort of students of the last year, the personal networks of each individual and complementary information on the sense of community and frequency of metropolitan movements, among other variables.</p> <p>In order to generate each complete social network, the list of 77 students enrolled in the last year of high school was passed to the respondents, asking that in each case they indicate the type of relationship, according to the following values: 1, “his/her name sounds familiar"; 2, "I know him/her"; 3, "we talk from time to time"; 4, "we have good relationship"; and 5, "we are friends." The two resulting complete networks are represented in Figure 2. In the second observation, it is a comparatively less dense network, reflecting the gradual disintegration process that the student group has initiated.</p> <p><strong>Personal networks</strong></p> <p>Also in this case the information is organized in two observations. The compressed file “Redes_Personales_t1.csv” includes 69 folders, corresponding to personal networks. Each folder includes a valued matrix of 45 alters in CSV format. Likewise, in each case a graphic representation of the network obtained with Visone (Brandes and Wagner, 2004) is included. Relationship values range from 0 (do not know each other) to 2 (know each other very well).</p> <p>Second, the compressed file “Redes_Personales_t2.csv” includes 57 folders, with the information equivalent to each respondent referred to the second observation, that is, 17 months after the first interview. The structure of the data is the same as in the first observation.</p> <p><strong>Sense of community and metropolitan displacements</strong></p> <p>The SPSS file “Albero.sav” collects the survey data, together with some information-summary of the network data related to each respondent. The 69 rows correspond to the 69 individuals interviewed, and the 118 columns to the variables related to each of them in T1 and T2, according to the following list:</p> <p> • Socio-economic data.</p> <p> • Data on habitual residence.</p> <p> • Information on intercity journeys.</p> <p> • Identity and sense of community.</p> <p> • Personal network indicators.</p> <p> • Social network indicators.</p> <p><strong>DATA ACCESS</strong></p> <p>Social networks and personal networks are available in CSV format. This allows its use directly with UCINET, Visone, Pajek or Gephi, among others, and they can be exported as Excel or text format files, to be used with other programs.</p> <p>The visual representation of the personal networks of the respondents in both waves is available in the following album of the <em>Graphic Gallery of Personal Networks</em> on Flickr: <<a href="https://www.flickr.com/photos/25906481@N07/albums/72157667029974755">https://www.flickr.com/photos/25906481@N07/albums/72157667029974755</a>>.</p> <p>In previous work we analyzed the effects of personal networks on the longitudinal evolution of the socio-centric network. It also includes additional details about the instruments applied. In case of using the data, please quote the following reference:</p> <ul> <li>Maya-Jariego, I., Holgado, D. & Lubbers, M. J. (2018). Efectos de la estructura de las redes personales en la red sociocéntrica de una cohorte de estudiantes en transición de la enseñanza secundaria a la universidad. <em>Universitas Psychologica, 17</em>(1), 86-98. <a href="https://doi.org/10.11144/Javeriana.upsy17-1.eerp">https://doi.org/10.11144/Javeriana.upsy17-1.eerp</a> </li> </ul> <p>The English version of this article can be downloaded from: <a href="https://tinyurl.com/yy9s2byl">https://tinyurl.com/yy9s2byl</a></p> <p><strong>CONCLUSION</strong></p> <p>The database of the “Albero” study allows us to explore the co-evolution of social networks and personal networks. In this way, we can examine the mutual dependence of individual trajectories and the structure of the relationships of the cohort of students as a whole. The complete social network corresponds to the same context of interaction: the secondary school. However, personal networks collect information from the different contexts in which the individual participates. The structural properties of personal networks may partly explain individual differences in the position of each student in the entire social network. In turn, the properties of the entire social network partly determine the structure of opportunities in which individual trajectories are displayed.</p> <p>The longitudinal character and the combination of the personal networks of individuals with a common complete social network, make this database have unique characteristics. It may be of interest both for multi-level analysis and for the study of individual differences.</p> <p><strong>ACKNOWLEDGEMENTS</strong></p> <p>The fieldwork for this study was supported by the Complementary Actions of the Ministry of Education and Science (SEJ2005-25683), and was part of the project “Dynamics of actors and networks across levels: individuals, groups, organizations and social settings” (2006 -2009) of the European Science Foundation (ESF). The data was presented for the first time on June 30, 2009, at the European Research Collaborative Project Meeting on Dynamic Analysis of Networks and Behaviors, held at the Nuffield College of the University of Oxford.</p> <p><strong>REFERENCES</strong></p> <p><strong>Brandes, U., & Wagner, D. (2004). </strong>Visone - Analysis and Visualization of Social Networks. In M. Jünger, & P. Mutzel (Eds.), <em>Graph Drawing Software</em> (pp. 321-340). New York: Springer-Verlag. </p> <p><strong>Maya-Jariego, I. (2018).</strong> Why name generators with a fixed number of alters may be a pragmatic option for personal network analysis. <em>American Journal of Community Psychology, 62</em>(1-2), 233-238. DOI 10.1002/ajcp.12271</p> <p><strong>Maya-Jariego, I., Holgado, D. & Lubbers, M. J. (2018).</strong> Efectos de la estructura de las redes personales en la red sociocéntrica de una cohorte de estudiantes en transición de la enseñanza secundaria a la universidad. <em>Universitas Psychologica, 17</em>(1), 86-98. https://doi.org/10.11144/Javeriana.upsy17-1.eerp</p> <p><strong>Maya-Jariego, I., Lubbers, M. J. & Molina, J. L. (2019).</strong> A friendship network in decay: The dynamics of social relationships of a secondary school cohort over the transition to university. <em>Remitido</em>.</p> <p><strong>Seidman, E., & French, S. E. (2004).</strong> Developmental trajectories and ecological transitions: A two-step procedure to aid in the choice of prevention and promotion interventions. <em>Development and Psychopathology, 16</em>(4), 1141-1159. https://doi.org/10.1017/s0954579404040179</p>
Albero study: a longitudinal database of the social network and personal networks of a cohort of students at the end of high school
<p>The Albero study analyzes the personal transitions of a cohort of high school students at the end of their studies. The data consist of (a) the longitudinal social network of the students, before (n = 69) and after (n = 57) finishing their studies; and (b) the longitudinal study of the personal networks of each of the participants in the research. The two observations of the complete social network are presented in two matrices in Excel format. For each respondent, two square matrices of 45 alters of their personal networks are provided, also in Excel format. For each respondent, both psychological sense of community and frequency of commuting is provided in a SAV file (SPSS). The database allows the combined analysis of social networks and personal networks of the same set of individuals.</p> <p><strong>INTRODUCTION</strong></p> <p>Ecological transitions are key moments in the life of an individual that occur as a result of a change of role or context.</p>
A longitudinal study of the associations of children's body mass index and physical activity with blood pressure – dataset
<p>B-Proact1v is a longitudinal study examining changes in children’s physical activity and sedentary behaviours as they progress through primary school. In 2012-2013, 1299 Year 1 children (median age: 6 years) were recruited from 57 schools in greater Bristol, UK (total number of eligible children: 2600; recruitment rate: 50.0%). Following this, data were collected from 1223 Year 4 children (median age: 9 years) from 47 of the original schools between March 2015 and July 2016 (total number of eligible children: 2047; recruitment rate: 59.7%). This included 685 children from the original sample.</p> <p> </p> <p>This dataset represents a subset of the B-Proact1v data to examine the longitudinal associations of children’s body mass index and physical activity with blood pressure. Included in this repository is the dataset and a data dictionary. The dataset includes the variables that underlie the findings in a manuscript entitled ‘A longitudinal study of the associations of children’s body mass index and physical activity with blood pressure’ that has been submitted to PLOS ONE. This dataset has been made available so that future researchers can replicate the study findings using the data. If you wish to use the data for any purpose other than replicating the study findings, please contact the Principal Investigator Professor Russ Jago (russ.jago@bristol.ac.uk) to discuss this.</p>
The relationship between linguistic expression and symptoms of depression, anxiety, and suicidal thoughts: A longitudinal study of blog content
<p>To investigate the associations between linguistic features and symptoms of depression, generalised anxiety, and suicidal ideation, we extracted linguistic features from individuals’ blog content and correlated it with validated mental health data in a longitudinal study (n=38). Depressive symptoms were assessed using the self-report Patient Health Questionnaire (PHQ-9), anxiety symptoms using the self-report Generalised Anxiety Disorder Scale (GAD-7), and social media data was analysed using the Linguistic Inquiry and Word Count (LIWC) tool for linguistic features. Bivariate and multivariate analyses were performed to investigate the correlations between the linguistic features and mental health scores between subjects. We then used the multivariate regression model to predict longitudinal changes in mood within subjects.</p>
Multidimensional pain profiling in people living with obesity and attending weight management services: a protocol for a longitudinal cohort study
<p><strong>Please note: The final dataset will not be available until data collection has been completed in the Autumn of 2024.<br> This dataset currently contains the following:</strong></p> <p>1. Details of the study, including authorship, ethical approval, funding, registration details, an abstract for the protocol of the study and details of data being collected (both in Microsoft Word and open access .txt formats)</p> <p>2. Outline of the data in the process of collection (Microsoft Excel)</p> <p>3. Ethical approval letters from relevant Research Ethics Committees (PDF)<br> <br> </p> <p> </p> <p><strong>Project Title: </strong>Multidimensional pain profiling in people living with obesity and attending weight management services: a longitudinal cohort study</p> <p> </p> <p><strong>Authors:</strong> Keith M. Smart<sup>1,2</sup>, Natasha Hinwood<sup>1</sup>, Colin G. Dunlevy<sup>3</sup>, Catherine Doody<sup>1</sup>, Catherine Blake<sup>1</sup>, Brona Fullen<sup>1</sup>, Jean O’Connell<sup>3</sup>, Carel W. Le Roux<sup>4</sup>, Clare Gilsenan<sup>5</sup>, Francis M. Finucane<sup>6,7</sup>, Gráinne O’Donoghue<sup>1</sup>.</p> <p> </p> <p><strong>Corresponding author</strong>: Natasha Hinwood</p> <p><strong>Address:</strong> UCD School of Public Health, Physiotherapy and Sport Science, University College Dublin, Dublin, Ireland</p> <p><strong>Email:</strong> <a href="mailto:natasha.hinwood@ucdconnect.ie">natasha.hinwood@ucdconnect.ie</a></p> <p><strong>Phone:</strong> +353 1 716 6511</p> <p> </p> <p>Full name, department, institution, city, and country of all co-authors.</p> <p><sup>1</sup>UCD School of Public Health, Physiotherapy and Sport Science, University College Dublin, Dublin, Ireland</p> <p><sup>2</sup>Physiotherapy Department, St. Vincent’s University Hospital, Dublin, Ireland</p> <p><sup>3</sup>Weight Management Service, St Columcille’s Hospital, Dublin, Ireland</p> <p><sup>4</sup>Diabetes Complications Research Centre, University College Dublin, Dublin, Ireland</p> <p><sup>5</sup>Physiotherapy Department, Beaumont Hospital, Dublin, Ireland</p> <p><sup>6</sup> School of Medicine, College of Nursing and Health Sciences, University of Galway</p> <p><sup>7</sup>Bariatric Medicine Service, Centre for Diabetes, Endocrinology and Metabolism, Galway University Hospitals</p> <p> </p> <p><strong>ORCID</strong></p> <p>1. Keith M. Smart: 0000-0002-1598-5215</p> <p>2. Natasha Hinwood: 0000-0001-9382-716X</p> <p>3. Colin G. Dunlevy:</p> <p>4. Catherine Doody:</p> <p>5. Catherine Blake: 0000-0002-0600-629X</p> <p>6. Brona Fullen: 0000-0003-4408--2063</p> <p>7. Carel W. Le Roux: 0000-0001-5521-5445</p> <p>8. Jean O’Connell: 0000-0001-7241-8025</p> <p>9. Clare Gilsenan:</p> <p>10. Francis M. Finucane: 0000-0002-5374-7090</p> <p>11. Gráinne O’Donoghue: 0000-0002-9126-2094</p> <p> </p> <p> </p> <p><strong>Project abstract (Protocol): </strong></p> <p><em>Introduction</em>:</p> <p>Pain is prevalent in people living with overweight and obesity. Obesity is associated with increased self-reported pain intensity and pain-related disability, reductions in physical functioning and poorer psychological well-being. People living with obesity tend to respond less well to pain treatments or management compared to people living without obesity. Mechanisms linking obesity and pain are complex and may variously include contributions from and interactions between physiological, behavioural, psychological, socio-cultural, biomechanical, and genetic factors. Our aim is to study the multidimensional pain profiles of people living with obesity, over time, in an attempt to better understand the relationship between obesity and pain.<br> </p> <p><em>Methods and analysis: </em></p> <p>This longitudinal observational cohort study will recruit (n=216) people living with obesity and who are newly attending three weight management services in Ireland. Participants will complete questionnaires that assess their multidimensional biopsychosocial pain experience at baseline and at 3, 6, 12 and 18-months post-recruitment. Quantitative analyses will characterise the multidimensional pain experiences and trajectories of the cohort as a whole and in defined sub-groups.<br> </p> <p><em>Ethics and dissemination: </em></p> <p>The study protocol has been approved by the Ethics and Medical Research Committee of St Vincent’s Healthcare Group, Dublin, Ireland (Reference No.: RS21-059) and the University College Dublin Human Research Ethics Committee (Reference No.: LS-E-22-41-Hinwood-Smart). Findings will be disseminated through peer-reviewed journals, conference presentations, public and patient advocacy groups, and social media.</p>
A Study of Hyporheic Characteristics Along a Longitudinal Profile of Lookout Creek, Oregon, 2003
Time series of tracer (Rhodamine WT) concentration data representing a "break-through curve" resulting from a single, multi-scale tracer test conducted along the length of Lookout Creek, from its 2nd-order headwaters through its 5th-order main stem. The longitudinal tracer test involved an in-stream injection of Rhodamine WT over 78 hrs, followed by monitoring at eight downstream locations for five months, starting in mid-June 2003 through the middle of November 2003. The injection site was located below the upper Old Growth Trail bridge. The monitoring sites include one downstream of the injection site, above and below the Cold Creek confluence, below the lower Old Growth Trail bridge, below Mack Creek confluence, above and below McRae Creek confluence, and at the HJA headquarters. Three additional inter-order tracer tests (IOTT) were carried out between each of the major stream confluences along Lookout Creek. The injection site for the McRae Creek IOTT was located below the McRae Cr. confluence and was monitored just downstream, at the end of the main floodplain, and at HJA headquarters. The injection site for the Mack Creek IOTT was located below the Mack Cr. confluence and was monitored just downstream, at an unnamed tributary midway between Mack Cr. and McRae Cr., and above the McRae Cr. confluence. The injection site for the Cold Creek IOTT was located below the Cold Cr. confluence and was monitored just downstream, at Longer Cr., and at the lower Old Growth Trail bridge. Concentration break through curves are available for all of the monitoring sites for the longitudinal and inter-order tracer tests. Flux break through curves are available for most of the monitoring sites. STAMMT-L model estimates for hyporheic exchange is listed for most of the monitoring sites.
Longitudinal observational study of pediatric patients with primary brain tumors: establishment of a hospital-based registry.
<p>Although tumors of the central nervous system (CNS) represent 2 % of all malignancies in general, they cause a disproportionately large morbidity and mortality and are the second most common form of cancer in children and the major solid tumor in childhood in the U.S., occurring in 21.3% of all children with malignant disease. The treatment of brain tumors in children and adolescents has evolved significantly in recent decades. Nowadays, most children with a diagnosis of brain tumor are treated properly and achieve prolonged survival. In order to obtain an overview of the impact of brain tumors, specialized registries, which provide information on all types of brain tumors, have emerged in several countries. Following on the pioneering Japanese and American experiences of specialized national records of brain tumors, other specialized registries were opened in European countries. This project aims to initiate a registry of the epidemiological profile of patients treated for CNS tumors in the Pediatric Cancer Center (CPC) of our hospital from January 2000 to December 2013, at diagnosis and during follow-up, updating information periodically. This data will be recorded in an electronic database capable of storing, retrieving and presenting information of interest. Prospectively recorded epidemiological data of patients diagnosed from January 2014 will be accrued, maintaining the database active to continuously record information on patients with CNS tumors treated in the CPC HIAS. Thus, creating a hospital registry of pediatric patients with CNS tumors. To this end, an instrument of data collection will be created using Google Apps (Google Inc., 2014), a digital platform with capacity for storage, creation and editing of documents and collaboration in real time over the cloud.</p>
Overview of PASTA Questionnaires: Physical Activity through Sustainable Transport Approaches (PASTA): protocol for a multi-centre, longitudinal study
<p>Overview of questionnaires used in the PASTA project (Physical Activity through Sustainable Transport Approaches (PASTA))</p> <p>English version</p>
Study-Data: Longitudinal Study about the relationship between computer mouse usage and emotional states
<p>This Dataset contains the raw data files of the longitudinal study about the relationship between computer mouse usage and emotional states. The files are gzipped json files.</p> <p>There are 3 separate data files.</p> <ol> <li>The self-directed mouse usage data recorded during a 5 minute interval of regular computer use (FreeMouse_dataset)</li> <li>The mouse usage data during the point-and-click task (MouseTask_dataset)</li> <li>The sociodemographics of the dataset (sociodem_dataset)</li> </ol> <p>Note that the sociodemographic data is also included in the FreeMouse dataset as well as in the MouseTask dataset.</p> <p>For any questions about the dataset, contact: paul.freihaut@psychologie.uni-freiburg.de</p>
Myotonic dystrophy research: imaging result files ( DTI, VBM) from a 5-year longitudinal follow-up study
<p>This ZIP-file contains supplementary data belonging to the manuscript</p> <p><strong>"Tracking the brain in myotonic dystrophy: a 5-year longitudinal follow-up study", published in PLOS ONE.</strong></p> <p>In this manuscript we aimed to examine the natural history of brain involvement in adult-onset myotonic dystrophies type 1 and 2 (DM1, DM2). We conducted a longitudinal observational study to examine functional and structural cerebral changes in myotonic dystrophies. We enrolled 16 adult-onset DM1 patients, 16 DM2 patients, and 17 controls. At baseline (T1) and at follow-up (T2) participants underwent neurological, neuropsychological, and 3T-brain MRI examinations using identical study protocols that included voxel-based morphometry and diffusion tensor imaging.</p> <p>The ZIP-file contains imaging result files from the different statistical analyses. </p>
Continuous Digital Monitoring of Walking Speed in Frail Elderly Patients: Noninterventional Validation Study and Longitudinal Clinical Trial (Data for independent validation study)
<p>Digital technologies and advanced analytics have drastically improved our ability to capture and interpret health relevant data from patients. However, to date, limited data and results have been published detailing real-world patient compliance, demonstrating accuracy in target indications or examining what novel insights and clinical value can be derived. Here we present novel, digital mobility data from two studies: an independent, non-interventional validation study with elderly, naturally slow walking subjects, and a global, multi-site phase IIb clinical trial involving patients with age-related muscle loss and slow walking speed (sarcopenia). Based on these data, we validate the accuracy of a novel algorithm for capturing in-clinic and real-world gait speed in frail, slow-walking adults. We demonstrate the feasibility of continuous monitoring with a wearable inertial sensor in elderly adults in real-world settings, and propose minimum thresholds for compliance required for robust capture of gait behaviors in this population. We also show how simple, inferred contextual information, describing the length of a given walking bout, can explain some of the variation in real-world gait speed, and use this information to demonstrate for the first time a relationship between in-clinic performance and real-world gait speed behavior. This work lays a foundation for exploration of the clinical relevance and value of such measures and is a first step in building a more complete chain of evidence between standardized physical performance assessment, real-world behavior, and subjective perceptions of mobility, independence and health.</p> <p>This dataset contains data collected during the independent validation study: derived data from raw accelerometry data, and summary performance data.</p> <p>The full dataset, including raw accelerometry data, is available here: <a href="https://mueller-et-al-2019.s3.amazonaws.com/index.html">https://mueller-et-al-2019.s3.amazonaws.com/index.html</a></p>
Fig. 5 in A longitudinal molecular study of the ecology of malaria infections in freeranging mandrills
Fig. 5. Influence of P. gonderi prevalence on N/L ratio in female (F) and male (M) mandrills aged 4–16yrs (a) and of P. mandrilli parasitaemia in young animals (b). (a) Means and standard errors of the mean calculated from raw values are represented. Sample sizes are provided for each category. (b) For clarity sake, we distinguished two categories of individuals: animals that were younger than the average (< 9.1 yrs) observed in the data set analyzed and those that were older (≥9.1 yrs). Preliminary observations indicated no relationship between N/L ratio and P. mandrilli parasitaemia in old individuals (not represented), we therefore chose to present visible effects in young animals only.
Fig. 4 in A longitudinal molecular study of the ecology of malaria infections in freeranging mandrills
Fig. 4. Influence of P. gonderi parasitaemia on female's (a) and male's (b) skin temperatures. Raw values are represented.
Fig. 2 in A longitudinal molecular study of the ecology of malaria infections in freeranging mandrills
Fig. 2. Kernel density estimates for the distribution of ages across all studied individuals (dashed green line) and those infected by P. mandrilli (solid blue line) and P. gonderi (dashed red line). (For interpretation of the references to color in this figure legend, the reader is referred to the Web version of this article.)
Fig. 1 in A longitudinal molecular study of the ecology of malaria infections in freeranging mandrills
Fig. 1. Annual patterns of prevalences (a) and parasitaemia (number of copies/ μl of blood; b) for the two studied Plasmodium species. Means and standard errors of the mean calculated from raw values are represented. For parasitaemia, outliers were excluded from mean calculations to allow visible interannual comparisons. We excluded four values for P. mandrilli (30,929, 134,387, 273,424, 1,267,280 copies) and four values for P. gonderi (78,322, 100,182, 767,718, 2,551,395 copies), all these elevated parasitaemia were measured in 2015, except one value measured in 2014 for P. mandrilli.
T-Evos: A Large-Scale Longitudinal Study on CI Test Execution and Coverage Evolution
<p><strong>Description</strong></p> <p>T-Evos is a dataset on test results and coverage evolution, covering 6,495 consecutive commits across 12 open-source Java projects.</p> <p> </p> <p><strong>Version 0.1.0</strong></p> <p>We have included the test results and code coverage data. The test results data has been combined into the `test_status.json` for ease of access at the root level of the repository. Each of the node zip files contains the code coverage data. In each of the zip files, the code coverage data folder is structured as followed:</p> <ul> <li>project_name <ul> <li>commit_id <ul> <li>details <ul> <li>test_name.json (individual test coverage data)</li> <li>...</li> </ul> </li> <li>coverage.json (full test coverage data on commit_id)</li> </ul> </li> <li>surefire_test_method_dict.json (available test cases)</li> </ul> </li> <li>project_name.csv (commit build status [success/fail])</li> </ul> <p>Note: the current version of the dataset includes temporary `project_cluster` folders that users might kindly ignore.</p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.