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22 results for “mitochondrial COI gene”
Fig. 5 in Mitochondrial DNA diversity in the acanthocephalan Prosthenorchis elegans in Colombia based on cytochrome c oxidase I (COI) gene sequence
Fig. 5. Distribution and frequency of Prosthenorchis elegans haplotypes (A–F) and haplogroups (I–II) by locality and individual. URRAS: Unidad de Rescate y Rehabilitacíon de Animales Silvestres, Universidad Nacional de Colombia; AMVA: Area Metropolitana del Valle de Aburŕa; WCS: Wildlife Conservation Society-Colombia.
Fig. 4 in Mitochondrial DNA diversity in the acanthocephalan Prosthenorchis elegans in Colombia based on cytochrome c oxidase I (COI) gene sequence
Fig. 4. Phylogenetic tree obtained using Bayesian Inference (BI) and Maximum Likelihood (ML); node supports are provided for BI\ML. Outgroup taxa: Oncicola sp, AF417000; O. luehe = Oncicola luehe, JN710452; M. ingens = Macracanthorhynchus ingens, AF416997; M. hirudinaceus = Macracanthorhynchus hirudinaceus, FR856886; O. tortuous = Oligacanthorhynchus tortuous, AF416999.
Fig. 3 in Mitochondrial DNA diversity in the acanthocephalan Prosthenorchis elegans in Colombia based on cytochrome c oxidase I (COI) gene sequence
Fig. 3. Haplotype network of Prosthenorchis elegans. Network shows relationships among P.elegans haplotypes (A–F) recovered from Saguinus leucopus and Cebus albifrons based on 633 bp of COI. All branches are of unit length (one mutational step). Labeled open circles represent observed haplotypes; areas of circles are proportional to the number observed for each haplotype. Filled circles indicate inferred haplotypes not found among sampled individuals. Double lines indicate variable sites (49, 274 and 293) resulting in changes in amino acid. Haplogroups are identified.
Fig. 2 in Mitochondrial DNA diversity in the acanthocephalan Prosthenorchis elegans in Colombia based on cytochrome c oxidase I (COI) gene sequence
Fig. 2. External morphology of Prosthenorchis elegans via scanning electron microscopy (SEM). A. View of entire body of parasite. B. Proboscis armed with hooks.
Figure 1. - Bayesian phylogeny of Euptychia based on one mitochondrial (COI) and one nuclear (EF1-a) gene. Posterior probabilities are listed above and bootstrap values below branches. A dash denotes bootstrap support lower than 50%. (Euptychiaattenboroughi is not included in the analysis – see text for details.)
Figure 1. - Bayesian phylogeny of Euptychia based on one mitochondrial (COI) and one nuclear (EF1-a) gene. Posterior probabilities are listed above and bootstrap values below branches. A dash denotes bootstrap support lower than 50%. (Euptychiaattenboroughi is not included in the analysis – see text for details.)
Fig. 1 in Mitochondrial DNA diversity in the acanthocephalan Prosthenorchis elegans in Colombia based on cytochrome c oxidase I (COI) gene sequence
Fig. 1. Photo showing the characteristic external morphology of Prosthenorchis elegans.
III Average nucleotide distances (%) based on the Kimura 2-parameter (K2P) model between Aselliscus spp., and associated outgroups based on complete mitochondrial Cytb (1,140 bp, below the diagonal) and COI (657 bp, above the diagonal) gene sequences in Description of a new species of the genus Aselliscus (Chiroptera, Hipposideridae) from Vietnam
III Average nucleotide distances (%) based on the Kimura 2-parameter (K2P) model between Aselliscus spp., and associated outgroups based on complete mitochondrial Cytb (1,140 bp, below the diagonal) and COI (657 bp, above the diagonal) gene sequences
Figure 7 in Molecular characterisation of leeches (Clitellata, Annelida) based on the mitochondrial cytochrome oxidase I (COI) gene region for Turkish fauna
Figure 7. Bayesian tree analysis of the COI (629 positions) data set of Hirudo species, with MrBayes v. 3.2.7.
Figure 8 in Molecular characterisation of leeches (Clitellata, Annelida) based on the mitochondrial cytochrome oxidase I (COI) gene region for Turkish fauna
Figure 8. Maximum likelihood phylogeny for Limnatis species based on COI sequences. Bootstrap values are shown for 1000 replicates.
Figure 3 in Molecular characterisation of leeches (Clitellata, Annelida) based on the mitochondrial cytochrome oxidase I (COI) gene region for Turkish fauna
Figure 3. Bayesian tree analysis of the COI (648 positions) data set of Glossiphonia species, with MrBayes v. 3.2.7.
Figure 9 in Molecular characterisation of leeches (Clitellata, Annelida) based on the mitochondrial cytochrome oxidase I (COI) gene region for Turkish fauna
Figure 9. Bayesian tree analysis of the COI (671 positions) data set of Limnatis species, with MrBayes v. 3.2.7.
Figure 5 in Molecular characterisation of leeches (Clitellata, Annelida) based on the mitochondrial cytochrome oxidase I (COI) gene region for Turkish fauna
Figure 5. Bayesian tree analysis of the COI (640 positions) data set of Helobdella species, with MrBayes v. 3.2.7.
Figure 1 in Molecular characterisation of leeches (Clitellata, Annelida) based on the mitochondrial cytochrome oxidase I (COI) gene region for Turkish fauna
Figure 1. Map of showing the areas surveyed for the occurrence of leeches. Wetlands where the species was found are indicated with dots.
Figure 6 in Molecular characterisation of leeches (Clitellata, Annelida) based on the mitochondrial cytochrome oxidase I (COI) gene region for Turkish fauna
Figure 6. Maximum likelihood phylogeny for Hirudo species based on COI sequences. Bootstrap values are shown for 1000 replicates.
Figure 4 in Molecular characterisation of leeches (Clitellata, Annelida) based on the mitochondrial cytochrome oxidase I (COI) gene region for Turkish fauna
Figure 4. Maximum likelihood phylogeny for Helobdella species based on COI sequences. Bootstrap values are shown for 1000 replicates.
Figure 2 in Molecular characterisation of leeches (Clitellata, Annelida) based on the mitochondrial cytochrome oxidase I (COI) gene region for Turkish fauna
Figure 2. Maximum likelihood phylogeny for Glossiponia species based on COI sequences. Bootstrap values are shown for 1000 replicates.
Figure 6 in A new species of Cistopus Gray, 1849 (Cephalopoda: Octopodidae) from the East and South China Seas and phylogenetic analysis based on the mitochondrial COI gene
Figure 6. The phylogenetic tree based on cytochrome c oxidase type I (COI) gene data. Numbers in bold face above branches are maximum likelihood/neighbour joining/maximum parsimony bootstrap support values (1000 replicates). Asterisk indicates bootstrap values less than 50%. Sepioteuthis lessoniana was used as distant outgroup species.
Figure 2 in A new species of Cistopus Gray, 1849 (Cephalopoda: Octopodidae) from the East and South China Seas and phylogenetic analysis based on the mitochondrial COI gene
Figure 2. Cistopus chinensis sp. nov. (A) Funnel organ, OUC-XKS021, male, 57.3 mm DML, scale bar 1 mm; (B) radula, OUC-XKS013, male, 75.6 mm DML, scale bar 100 µm; (C) distal end of hectocotylized arm, lateral view, OUC-XKS024, male, 43.2 mm DML, scale bar 1 mm; (D) stylet, OUC-XKS016, female, 56.3 mm DML, scale bar 5 mm; (E) digestive system, OUC-XKS021, male, 57.3 mm DML, scale bar 50 mm. Abbreviations: a, anus; asg, anterior salivary gland; bm, buccal mass; c, caecum; cd, crop diverticulum; cr, crop; dg, digestive gland; i, intestine; is, ink sac; o, oesophagus; psg, posterior salivary gland; s, stomach.
Figure 5 in A new species of Cistopus Gray, 1849 (Cephalopoda: Octopodidae) from the East and South China Seas and phylogenetic analysis based on the mitochondrial COI gene
Figure 5. Cistopus chinensis sp. nov.. (A,C) OUC-XKS-WH001, 71.8 mm DML male; (B) OUC-XKS015, 59.2 mm DML female. (D,E) obtained from hatching pond indoors. (A) Male reproductive tract, scale bar 10 mm; (B) reproductive system of female, scale bar 10 mm; (C) spermatophore, scale bar 5 mm; (D) egg cluster; (E) single laid egg (length = 13.0 mm). Abbreviations: ag, accessory gland; do, distal oviduct; ea, ejaculatory apparatus; f, filament; mg, mucilaginous gland; o, ovary; og, oviducal gland; sr, sperm reservoir; ss, spermatophore storage sac; t, testis; to, terminal organ; vd, vas deferens.
Figure 1 in A new species of Cistopus Gray, 1849 (Cephalopoda: Octopodidae) from the East and South China Seas and phylogenetic analysis based on the mitochondrial COI gene
Figure 1. Cistopus chinensis sp. nov. Dorsal (left) and ventral view (right) of whole animal, holotype (CMRC-XKS-0908026, male, 96 mm DML).
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