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Raw metabolomics data of the paper: New findings in the metabolism of the saffron apocarotenoids, crocins and crocetin, by the human gut microbiota
<p>Raw dataset of the metabolomicas data of the study : New findings in the metabolism of the saffron apocarotenoids, crocins and crocetin, by the human gut microbiota.</p> <p>The csv file contain the raw data matrix exported from MS-DIAL software after total ions aligment across all study samples.</p>
Dataset: RC U-shaped walls subjected to in-plane, diagonal, and torsional loading: new experimental findings
<p>This dataset contains the processed experimental digital image correlation (DIC) technique data for two large-scale reinforced concrete U-shaped wall specimens tested at the Earthquake Engineering and Structural Dynamics Laboratory (EESD Lab), École Polytechnique Féderale de Lausanne (EPFL) in Switzerland. The abstract for the corresponding journal paper, submitted to <em>Engineering Structures</em>, is given below.</p> <p>Although reinforced concrete U-shaped walls are popular in construction practice internationally, there is a paucity of experimental research investigating the seismic performance of such salient elements. The present paper summarizes an experimental campaign on two slender U-shaped reinforced concrete walls detailed with a single-layer of reinforcement. State-of-the-art instrumentation was used to capture the three-dimensional displacement field of the wall surfaces using digital image correlation techniques. Experimental findings are presented, including strain profiles, equivalent plastic hinge lengths, longitudinal strains at the base, cracking distributions and widths, and out-of-plane deformations. The longitudinal strain profiles showed a yielding region up the boundary ends of the flanges of approximately 800 mm to 1200 mm in length, depending on the direction of loading and at large drift levels. Approximately half of the yielding zone length was found to be equal to the equivalent plastic hinge lengths, which were found to decrease as a function of drift. The longitudinal strains at the base of these walls showed some shear lag effects when subjected to in-plane or diagonal loading. For most directions of loading, the largest crack widths were found to be associated with flexural-shear or shear cracks. When subjected to a pure torque, the vertical strain distribution at the base of the wall correlated with the theoretical distribution for an open section governed by warping torsion. The out-of-plane deformations were primarily concentrated within a small region towards the ends of the flanges prior to the local buckling failures that were observed experimentally.Although reinforced concrete U-shaped walls are popular in construction practice internationally, there is a paucity of experimental research investigating the seismic performance of such salient elements. The present paper summarizes an experimental campaign on two slender U-shaped reinforced concrete walls detailed with a single-layer of reinforcement. State-of-the-art instrumentation was used to capture the three-dimensional displacement field of the wall surfaces using digital image correlation techniques. Experimental findings are presented, including strain profiles, equivalent plastic hinge lengths, longitudinal strains at the base, cracking distributions and widths, and out-of-plane deformations. The longitudinal strain profiles showed a yielding region up the boundary ends of the flanges of approximately 800 mm to 1200 mm in length, depending on the direction of loading and at large drift levels. Approximately half of the yielding zone length was found to be equal to the equivalent plastic hinge lengths, which were found to decrease as a function of drift. The longitudinal strains at the base of these walls showed some shear lag effects when subjected to in-plane or diagonal loading. For most directions of loading, the largest crack widths were found to be associated with flexural-shear or shear cracks. When subjected to a pure torque, the vertical strain distribution at the base of the wall correlated with the theoretical distribution for an open section governed by warping torsion. The out-of-plane deformations were primarily concentrated within a small region towards the ends of the flanges prior to the local buckling failures that were observed experimentally.</p>
Fig. 4 in Taxonomic revision of Australian Amobia Robineau-Desvoidy, 1830 (Sarcophagidae: Miltogramminae): integrating morphology and genetics finds a new species and tackles old problems
Fig. 4. Amobia burnsi (Malloch, 1930), ♂, NSW, North Head, Sydney Harbour, 14 Feb. 1978, G. Daniels leg. (AM) A. Habitus, lateral view. B. Head, lateral view. C. Habitus, dorsal view. D. Head, dorsal view. E. Abdomen, dorsal view. F. Left wing, dorsal view. G. Head, anterior view. Scale bars: 1 mm.
Fig. 1 in Taxonomic revision of Australian Amobia Robineau-Desvoidy, 1830 (Sarcophagidae: Miltogramminae): integrating morphology and genetics finds a new species and tackles old problems
Fig. 1. Maximum likelihood phylogenetic tree indicating the placement of Amobia among the global Miltogramminae, inferred from COI, CYTB, ND4 and EF1α sequence data. With the exception of the three newly sequenced Australian Amobia and Macronychia rubesca, data was acquired from Piwczyński et al. (2017). Node support values are shown for both maximum likelihood analysis (bootstrap support, 1000 iterations; in bold font) and Bayesian analysis (posterior probability, 40 million generations), 'NA' indicates nodes resolved that were not resolved by the Bayesian analysis. Branch length scale = 0.3 nucleotide substitutions per site (calculated by the GTR+G nucleotide substitution model).
Fig. 6 in Taxonomic revision of Australian Amobia Robineau-Desvoidy, 1830 (Sarcophagidae: Miltogramminae): integrating morphology and genetics finds a new species and tackles old problems
Fig. 6. Amobia serpenta sp. nov., holotype, ♂, NT, Serpentine Gorge, West MacDonnell National Park, 13 Nov. 2017, Johnston, Wallman and Szpila leg. (ANIC). A. Habitus, lateral view. B. Head, lateral view. C. Habitus, dorsal view. D. Head, dorsal view. E. Abdomen, dorsal view. F. Left wing, dorsal view. G. Head, anterior view. Scale bars: 1 mm.
Fig. 3 in Taxonomic revision of Australian Amobia Robineau-Desvoidy, 1830 (Sarcophagidae: Miltogramminae): integrating morphology and genetics finds a new species and tackles old problems
Fig. 3. Amobia auriceps (Baranov, 1935), male terminalia, QLD, Cairns, 1919, J.F. Illingworth leg. (BM). A. Epandrium, cerci, surstyli and phallus, posterior view. B. Epandrium, cerci, surstyli, phallus and pre-gonite, lateral view. Abbreviations: c = cercus; d = distal lobe of phallus; s = surstylus; p = pregonite. Scale bars: 100 µm.
Fig. 5 in Taxonomic revision of Australian Amobia Robineau-Desvoidy, 1830 (Sarcophagidae: Miltogramminae): integrating morphology and genetics finds a new species and tackles old problems
Fig. 5. Amobia burnsi (Malloch, 1930), male terminalia, NT, 15 km N Katherine, 16 May 2005, R.W. Matthews leg (ANIC). A. Epandrium, cerci, surstyli and phallus, posterior view. B. Epandrium, cerci, surstyli, phallus and pre-gonite, lateral view. C. SEM image of epandrium, gonites, cerci and surstyli, posterior view. D. SEM image of epandrium, gonites, phallus, cerci and surstyli, lateral view. Abbreviations: c = cercus; d = distal lobe of phallus; s = surstylus; p = pre-gonite. Scale bars: 100 µm.
Fig. 3 in New Findings Of White Clawed Crayfish, Austropotamobius Pallipes (Decapoda, Astacidae), And Peculiarities Of Its Spatial Distribution In Neretvica (Bosnia And Herzegovina)
Fig. 3. Isobath map (depth, m) and isopach map (velocity, m/s) (the locations of the crayfish catches are marked with red dots).
Fig. 6 in New Findings Of White Clawed Crayfish, Austropotamobius Pallipes (Decapoda, Astacidae), And Peculiarities Of Its Spatial Distribution In Neretvica (Bosnia And Herzegovina)
Fig. 6. Extraction of the crayfish from the trap at Neretvica near the confluence with the Crny Potok.
Figs 1–5 in A New Finding Of The Non-Native Copepod Sinodiaptomus Sarsi (Copepoda, Calanoida, Diaptomidae) In Ukraine
Figs 1–5. Sinodiaptomus sarsi: 1 — habitus of female (A) and male (B); 2 — last prosomal somite and urosome of female; 3 — leg 5, female; 4 — right antennule, male; 5 — leg 5, male.
Fig. 5 in New Findings Of White Clawed Crayfish, Austropotamobius Pallipes (Decapoda, Astacidae), And Peculiarities Of Its Spatial Distribution In Neretvica (Bosnia And Herzegovina)
Fig. 5. Isobath map (depth, m) and isotach map (velocity, m/s) (the locations of the crayfish catches using scuba diving are marked with red dots).
Maps of depths are created for the site of 50 m length. Flow types are turbulent, broken standing waves, unbroken standing waves, and rippled. The average width was 8 m and varied from 5.5 to 12 m. Bed elements included bars, rocks, and step/pools. The average depth was 0.35 m, with a maximum of 0.6 m. The average velocity was 0.4 m/s, with a maximum of 1.2 m/s (figs 10). Distribution of bottom habitats at the locations with the crayfish are as follows: megalital — 5 %, macrolithal — 30 %, mesolithal — 25 %, microlithal — 15 %, psammal — 15 %, CPOM — 10 %. Assessment by hydrobiological parameters showed that the presence of Lyngbya and Oscillatoria, as well as the increase of the number of Oligochae- in New Findings Of White Clawed Crayfish, Austropotamobius Pallipes (Decapoda, Astacidae), And Peculiarities Of Its Spatial Distribution In Neretvica (Bosnia And Herzegovina)
Maps of depths are created for the site of 50 m length. Flow types are turbulent, broken standing waves, unbroken standing waves, and rippled. The average width was 8 m and varied from 5.5 to 12 m. Bed elements included bars, rocks, and step/pools. The average depth was 0.35 m, with a maximum of 0.6 m. The average velocity was 0.4 m/s, with a maximum of 1.2 m/s (figs 10). Distribution of bottom habitats at the locations with the crayfish are as follows: megalital — 5 %, macrolithal — 30 %, mesolithal — 25 %, microlithal — 15 %, psammal — 15 %, CPOM — 10 %. Assessment by hydrobiological parameters showed that the presence of Lyngbya and Oscillatoria, as well as the increase of the number of Oligochae-
Fig. 4 in New Findings Of White Clawed Crayfish, Austropotamobius Pallipes (Decapoda, Astacidae), And Peculiarities Of Its Spatial Distribution In Neretvica (Bosnia And Herzegovina)
Fig. 4. Habitat with the highest concentration of the crayfish in Neretvica at the confluence with the Crni Potok.
A network-based approach for isolating the chronic inflammation gene signatures underlying complex diseases towards finding new treatment opportunities
<p>This file contains the data that was used in the paper titled "A network-based approach for isolating the chronic inflammation gene signatures underlying complex diseases towards finding new treatment opportunities" which will be published in Frontiers of Pharmacology.</p>
Fig. 1. Cirsotrema matugisiense, A–C – specimen ZISP 62489 in New finding of the epitoniid Cirsotrema matugisiense (Ozaki, 1958) (Mollusca: Gastropoda) in the Sea of Japan
Fig. 1. Cirsotrema matugisiense, A–C – specimen ZISP 62489/1, shell, height of shell 83.1 mm, diameter of the last whorl 34.0 mm; D – specimen ZISP 62490/2, operculum 17.1x13.9 mm.
Fig. 2 in New finding of the epitoniid Cirsotrema matugisiense (Ozaki, 1958) (Mollusca: Gastropoda) in the Sea of Japan
Fig. 2. Shells of Epitoniidae: A – Amaea iwaotakii, after Tsushida [2000]; C, D – Cirsotrema matugisiense (Recent), after Nakayama [2003]; B, E – Epitonium (Boreoscala) yokozunai (the holotype, fossil, after Nakayama [2003]); F – Epitonium (Boreoscala) matugisiense (the holotype, fossil, after Nakayama [2003]).
Рис. 1. Sicista betulina: 1 — Λесная мышовка, пойманная в окрестностях сеΛа КойÀа; 2 — карта распространения виÀа: зеΛеная заΛивка — ареаΛ виÀа по Burgin et al. 2020, синие звезÀочки — точки нахоÀок в национаΛьном парке «Онежское Поморье» и на СоΛовецком архипеΛаге (Черенкова 2014), красный круг — новая нахоÀка в районе Àеревни КойÀа; 3–4 — биотопы, в которых быΛ встречен виÀ в окрестностях сеΛа КойÀа Fig. 1. Sicista betulina: 1 — the northern birch mouse caught in the vicinity of Koida village; 2 — the species distribution map: the green fill — species range according to Burgin et al. 2020; the blue stars — points where the species was found in the Onezhskoye Pomorye National Park and on the Solovetsky Archipelago (Cherenkova 2014); the red circle — a new find in the area of Koida village; 3–4 — biotopes in which the species was encountered in the vicinity of Koida village in A new record of the northern birch mouse Sicista betulina (Pallas, 1779) in the north of the Arkhangelsk Region (Rodentia: Sminthidae)
Рис. 1. Sicista betulina: 1 — Λесная мышовка, пойманная в окрестностях сеΛа КойÀа; 2 — карта распространения виÀа: зеΛеная заΛивка — ареаΛ виÀа по Burgin et al. 2020, синие звезÀочки — точки нахоÀок в национаΛьном парке «Онежское Поморье» и на СоΛовецком архипеΛаге (Черенкова 2014), красный круг — новая нахоÀка в районе Àеревни КойÀа; 3–4 — биотопы, в которых быΛ встречен виÀ в окрестностях сеΛа КойÀа Fig. 1. Sicista betulina: 1 — the northern birch mouse caught in the vicinity of Koida village; 2 — the species distribution map: the green fill — species range according to Burgin et al. 2020; the blue stars — points where the species was found in the Onezhskoye Pomorye National Park and on the Solovetsky Archipelago (Cherenkova 2014); the red circle — a new find in the area of Koida village; 3–4 — biotopes in which the species was encountered in the vicinity of Koida village
Fig. 2 in New finds of Olenekian, Early Triassic, trematosaurid amphibians and prolocophonid reptiles from Poland
Fig. 2. Parasphenoid of Trematosauridae gen. et sp. indet. from Lower Triassic of Stryczowice, Holy Cross Mountains, Poland. ZPAL V. 78/3, reconstruc- tion in dorsal (A1), ventral (A2), and lateral (A3) views, original specimen, part and counterpart (A4, A5). The restoration was based on the CT scan by supplementing the missing fragment with a mirror image of the preserved part (Fig. 3B).
Fig. 4 in New finds of Olenekian, Early Triassic, trematosaurid amphibians and prolocophonid reptiles from Poland
Fig. 4. Temnospondyli indet. (A) and Procolophonidae gen. et sp. indet (B) from Lower Triassic of Stryczowice, Holy Cross Mountains, Poland. A. ZPAL V. 78/2, tooth. B. ZPAL V. 78/1, maxilla in lateral (B1) and ventral (B2) views; teeth in lateral view (B3, B5); cross-section of maxillary teeth in dorsal view (B4).
Fig. 1 in New finds of Olenekian, Early Triassic, trematosaurid amphibians and prolocophonid reptiles from Poland
Fig. 1. The geological setting of the vertebrate-bearing locality at Stryczowice. A. Location of the Holy Cross Mountains in Poland. B. Simplified geological map of the Holy Cross Mountains with Paleozoic core and range of the Bundsandstein exposures. C. Location of the Stryczowice locality on the geological map of the north-eastern margin of the Holy Cross Mountains with Paleozoic deposits, continental mass flow-conglomerates traditionally referred to as the "Zechstein", Buntsandstein, and younger deposits. D. Log of the Stryczowice quarry with location of the bone-bearing basal conglomerate marked by a black arrow, and location of the levels with arthropod trackways marked by white arrows; numbers 1–5 mark units discussed in text. Figure adopted from Machalski and Machalska 1994: fig. 1.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.