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opencc-by-4.0Jan 2020View details →

Acclimation to water restriction implies different paces for behavioral and physiological responses in a lizard species

Raw data of the article "Acclimation to Water Restriction Implies Different Paces for Behavioral and Physiological Responses in a Lizard Species" by Rozen-Rechels D. et al., published in Physiological and Biochemical Zoology 93(2):160-174 in 2020 (https://doi.org/10.1086/707409). These data are freely available in csv format. See the readme file for metadata explanation. Data were formatted by the first author David Rozen-Rechels and collected according to standards and procedures described in the companion journal article.

opencc-by-4.0Aug 2023View details →

Phlorest phylogeny derived from Grollemund et al. 2015 'Bantu expansion shows habitat alters the route and pace of human dispersals'

Cite the source of the dataset as: <blockquote> Grollemund R, Branford S, Bostoen K, Meade A, Venditti C & Pagel M. 2015. Bantu expansion shows habitat alters the route and pace of human dispersals. Proceedings of the National Academy of Sciences of the USA, 112(43), 13296-13301. </blockquote>

opencc-by-4.0Jul 2022View details →

Improving students' privacy awareness – Analysis of a pilot survey to design a VR environment for self-paced learning

In this research, we measured the knowledge of students at the University of Debrecen in the field of data privacy awareness, online and password security. Description <ul> <li>In the questionnaire, green-highlighted answer signs the correct answer to each question.</li> <li>Total data set contains the answers to each question and the respondent's age.</li> <li>Correct/incorrect data set contains information if the answer is correct to each question, and it also contains the respondent's age. One means the answer was correct, and zero means the answer was incorrect.</li> </ul>

opencc-by-4.0Jun 2024View details →

Charles Pace (p1488)

-- <a href="https://doi.org/10.5281/zenodo.11582199">Documentation</a> -- Name: Charles Pace musiXplora-ID: p1488 musiXplora-URI: <a href="https://musixplora.de/mxp/p1488">https://musixplora.de/mxp/p1488</a> Gender: m First Mentioned: 1819 Last Mentioned: 1883 Sectors: Instrumentenbau, Militär Professions (Musical): Blechblasinstrumentenbauer Other Places of Activity: London, Sheffield, Yorkshire Titel/Medien: <table><tbody><tr><th>Role</th><th>Sigel</th><th>Title</th><th>mXp-ID</th></tr><tr><td>Related</td><td>New Langwill Index 1993</td><td>The New Langwill Index. A Dictionary of Musical Wind-Instrument Makers and Inventors. NLI</td><td><a href="https://musixplora.de/mxp/5001112">5001112</a></td></tr></tbody></table> Ereignisse: <table><tbody><tr><th>Role</th><th>Sigel</th><th>Title</th><th>mXp-ID</th></tr><tr><td>Hersteller</td><td></td><td>Herstellung</td><td><a href="https://musixplora.de/mxp/6009286">6009286</a></td></tr></tbody></table> Changelog:   - v0.0.1: Initial Upload.

opencc-by-4.0Oct 2022View details →

TOPS Graphic for the 2022 PACE Applications Workshop

This graphic was made to be displayed on a TV screen during the NASA 2022 PACE (Plankton, Aerosol, Cloud, ocean Ecosystem) Applications Workshop held on September 14-15, 2022.

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Data from: Seed origin and warming constrain lodgepole pine recruitment, slowing the pace of population range shifts

Open the record for dataset details and reuse information.

publicSep 2021View details →

opencc-by-4.0Feb 2010View details →

Figure 29 in A remarkable new species of Himalusa Pace from Thailand (Coleoptera, Staphylinidae, Aleocharinae): phytophagous aleocharine beetle with potential for bio-control of skunkvine-related weeds in the United States

Figure 29. Himalusa thailandensis: a larva that emerged from a swollen petiole of Paederia sp. leaf.

opencc-by-4.0Dec 2023View details →

Pacing of primary murine cardiomyocytes expressing human TRPV1 using infra-red laser

<h2>Abstract</h2> The expression of human TRPV1 in cardiomyocytes allowed us to induce action potentials (APs) by pulse irradiation with infra-red (IR) diod laser. Mice cardiomyocytes were transformed by AAV-based vectors bearing construction of TRPV1 with mRuby (for expression detection). We selected cells having their own intrisic AP generation and then set them up for measuring membrane potential in a current-clamp mode. Cells were irradiated using 2 or 7 Hz laser pulses. Laser trigger pulses were recorded along with cell potential. In the dataset 05-12-22.zip, there are some records where electrical stimulation were used alone or together with IR pulses. Experimental conditions are summarized in the file experiment-descriptions.tsv. <h2>Primary cell production and transformation</h2> Experiments were carried out using C57Bl/6J mice (The Jackson Laboratory, #000664, RRID: IMSR_JAX:000664). The mixed mouse primary neonatal cardiomyocyte cell culture was obtained using a neonatal heart dissociation kit (Miltenyi Biotec, 130-098-373) according to the manufacturer’s instructions. The cells were cultured in DMEM/F12, 1:1 mixture (BioloT,  1.3.7.2.) supplemented with 10% FBS, penicillin 100 U/ml /streptomycin 100 mg/ml, and L-glutamine 0.365 g/l. The culture was seeded on 10mm coverslips coated with 10 mg/ml gelatin diluted in PBS and maintained at 37℃ in 5% CO2. For transient expression of the hTRPV1 channel, a reporter protein, and a fluorescent Ca2+ sensor GCaMP6s, we used AAV-based vectors with the encoded genes above. We used AAV-DJ serotype at a MOI of 12,000 VG/cells for cTnT_hTRPV1(sh)_P2A_mRuby based viruses, and a MOI of 2,500 VG/cells for cTnT_GCaMP6s ones. The cells were infected on the next day after plating, and the transgene expression peak was observed on the third day after the infection. <h2>Distant heating system</h2> The system was equipped with a fiber coupled laser diode (LD) 4PN-117 (SemiNex) as a powerful heating laser, providing radiation at a wavelength of 1375 nm with an average power of up to 4.3 W through a multimode fiber with a core diameter of 105 μm and 0.22NA. The LD was mounted onto a TEC-controlled plate “264 TEC HP LaserMount” (A.I.), which was operated by TEC driver TECSource 5305 (A.I.); current stabilization and control for LD were performed with LD driver LaserSource 4320 (A.I.). The laser was controlled via the TTL output from the HEKA EPC-10 amplifier. Different laser intensities, and pulse widths were used. Laser power, P, can be computed from trigger voltage, U, by an equation: P [W] = -0.28 + 1.42 * U [V] <h2>Electrophysiology of single cardiac cells </h2> Patch electrodes were pulled from hard borosilicate capillary glass (Sutter Instruments flaming/brown micropipette puller) and filled with an intracellular solution consisting of (in mM) K-gluconate, 100; KCl, 40; HEPES, 10; NaCl, 8; MgATP, 4; MgGTP, 0.3; phosphocreatine, 10 (pH 7.3 with KOH). Cells were identified visually using IR-video microscopy using a Hamamatsu ORCA-Flash4.0 V3 Digital sCMOS camera (Hamamatsu Photonics) expression of wild type or mutant TRPV1 was confirmed by the presence of red flourescent protein. Coverslips were placed in a recording chamber continuously perfused with heated Tyrode's solution. Whole-cell recordings were taken at 32°C in current-clamp mode using a HEKA EPC-10 amplifier (List Elektronik) with a sampling rate of 100 μs. Steady state current was injected to achieve a membrane potential of approximately −60 to −90 mV. For experiments using the IR laser the optic fiber was placed near the cell, and light from a green laser diode was shone onto the cell to check correct positioning.

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Data for: The pace of global river meandering influenced by fluvial sediment supply

Meandering rivers move gradually across the floodplains, and this river movement presents socioeconomic risks along river corridors and regulates terrestrial biogeochemical cycles. Experimental and field studies suggest that fluvial sediment supply can exert a primary control on lateral migration rates of rivers. However, we lack an understanding of the relative importance of environmental boundary conditions, such as floodplain vegetation and sediment supply, in setting the pace of river meandering across different environmental settings. Here, we combine the analysis of satellite imagery and global-in-scale sediment and water discharge models to evaluate the controls on lateral migration rates of 139 meandering rivers that span a wide range in size, climate, and bank vegetation. We show that migration rates normalized by the channel width monotonically increase with the volumetric sediment flux normalized by the characteristic size of the river. This relation is consistent across rivers in vegetated and unvegetated catchments, indicating that enhanced lateral migration rates in unvegetated basins is likely not only facilitated by lower bank mechanical strength, but also by higher normalized sediment supply in ephemeral rivers. Using three case examples, we also demonstrate that width-normalized meander migration rates respond to spatial gradients in sediment supply caused by river impoundments, highlighting the prominent role of sediment supply in setting the pace of meander migration. Our results suggest that sediment-supply variations caused by climate, land-cover and land-use changes can lead to predictable changes in meandering river evolution and ultimately drive architectural changes in sedimentary stratigraphy.

opencc-zeroMar 2024View details →

F I G U R E 7 in Global warming is projected to lead to increased freshwater growth potential and changes in pace of life in Atlantic salmon Salmo salar

F I G U R E 7 Model prediction of the proportion of juvenile Atlantic salmon choosing to smolt as 1-year-olds (full saturation, black = historical, green = SSP1-RCP2.6, orange = SSP3-RCP7.0, and red = SSP5-RCP8.5), 2-year-olds (medium saturation, black = historical, green = SSP1-RCP2.6, orange = SSP3-RCP7.0, and red = SSP5-RCP8.5), and 3-year-olds (low saturation, black = historical, green = SSP1-RCP2.6, orange = SSP3-RCP7.0, and red = SSP5-RCP8.5). The red line is the point of reaction norm calibration to Piggins and Mills (1985).

F I G U R E 5 in Global warming is projected to lead to increased freshwater growth potential and changes in pace of life in Atlantic salmon Salmo salar

F I G U R E 5 Ensemble average daily water temperature by day of year for the future projections under the three shared socioeconomic pathways and representative concentration pathways (SSP1-RCP2.6 left, SSP5-RCP7.0 middle, and SSP5-RCP8.5 right). Each line represents the day of year average temperature for the climate forcing ensemble with colors transitioning from blue to red toward the end of the century (starting with 2020 and ending with 2100). The lower dashed line represents the lower growth threshold temperature of 7 C, and the upper dashed line represents the upper growth threshold temperature for 23 C (Elliott & Hurley, 1997).

F I G U R E 6 Projected change between 1960 and 2100 in Global warming is projected to lead to increased freshwater growth potential and changes in pace of life in Atlantic salmon Salmo salar

F I G U R E 6 Projected change between 1960 and 2100 in length-at-smoltification decision (a, b, and c), length-at-smoltification as 1-year-olds (d, e, and f), and length-at-smoltification as 2-year-olds (g, h, and i) under the three shared socioeconomic pathways and representative concentration pathways: SSP1-RCP2.6 (green), SSP3-RCP7.0 (orange), and SSP5-RCP8.5 (red) for juvenile Atlantic salmon in the Burrishoole. The gray-shaded area represents the historical reference (2000 to 2020), and the red vertical line represents the historical average.

F I G U R E 4 in Global warming is projected to lead to increased freshwater growth potential and changes in pace of life in Atlantic salmon Salmo salar

F I G U R E 4 Generalized linear model of body length (mm) as a function of cumulative growing degree days (CGDD, C day) for the 23 observed cohorts of juvenile Atlantic salmon in the Burrishoole watershed. The solid line represents the mean length, and the gray bands represent the 95% prediction interval. The outer lines represent the sample density.

F I G U R E 3 in Global warming is projected to lead to increased freshwater growth potential and changes in pace of life in Atlantic salmon Salmo salar

F I G U R E 3 The residual error between observed and predicted water temperature (top panel), and the in-situ water temperature (black line) and long short-term memory neural network water temperature prediction (red crosses) for the training (1961–1994) and validation (1995–2019) dataset in the Mill Race (bottom panel). Years excluded due to accumulation of internal sate (green), prolonged periods of missing data (blue shaded), and measurement error (red shaded) are shown in the top panel, and the delineation of the training and validation period is shown by the vertical dashed line in both panels.

F I G U R E 2 in Global warming is projected to lead to increased freshwater growth potential and changes in pace of life in Atlantic salmon Salmo salar

F I G U R E 2 The four-step model workflow for quantitatively estimating length-at-age and life history of juvenile Atlantic salmon in response to climate change. Step 1 describes the collation of necessary data and construction of the water temperature model. Step 2 details the data preparation and construction of the length-at-age model for juvenile Atlantic salmon. Step 3 shows the coupling of the ISIMIP phase 3B projections to the water temperature model, and the subsequent coupling with the length-at-age model. Step 4 shows the post-processing of length-at-age projections to estimate smoltification probability and proportion of 1-, 2- and 3-year-old smolts. Shapes are according to ISO 5807 standard.

F I G U R E 1 in Global warming is projected to lead to increased freshwater growth potential and changes in pace of life in Atlantic salmon Salmo salar

F I G U R E 1 Location of electrofishing sites (green circles) and fish traps (red circles) in the Burrishoole catchment, Co. Mayo, Ireland.

opencc-by-nc-4.0Apr 2020View details →

CLDF dataset derived from Grollemund et al.'s "Bantu expansion shows habitat alters the route and pace of human dispersals" from 2015

Cite the source of the dataset as: <blockquote> Grollemund, Rebecca, Branford, Simon, Bostoen, Koen, Meade, Andrew, Venditti, Chris, & Pagel, Mark (2015) Bantu expansion shows habitat alters the route and pace of human dispersals. Proc Natl Acad Sci USA. doi:10.1073/pnas.1503793112. </blockquote>

opencc-by-4.0Mar 2022View details →

Data for manuscript: Ecological lags govern the pace and outcome of plant community responses to 21st century climate change

These data were used in the analyses reported in Block et al. "Ecological lags govern the pace and outcome of plant community responses to 21st century climate change".

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Data from: Pace and shape of senescence in three species of duckweed

Senescence is progressive bodily deterioration associated with declines in survival and fecundity in older age classes. There is great diversity in patterns of senescence across species, but these patterns can be difficult to compare formally due to variation in the absolute time scales in which species live and die: members of some species live for a matter of days, others for millennia. To address this issue, the 'pace-shape' approach was developed to decouple absolute time from analyses and instead standardize life history traits in terms of average life expectancy, facilitating intra- and interspecific comparisons. Here, we use this approach to distinguish the generic form of demographic trajectories (shape) from the time scale on which the trajectories occurred (pace) in three species of tiny, free-floating aquatic plants known as duckweeds (Lemna gibba L., L. minor L., and L. turionifera Landolt), which have mean lifespans of less than a month under typical lab conditions, and exhibit age-related declines in survivorship and reproduction. Using a randomized block design in which we tracked a final total of 430 individuals, we report differences in pace and shape among the three species. Specifically, the largest, least-fecund, and typically longest-lived species, L. gibba, tended to exhibit more rapid decreases in time-standardized survivorship and fecundity compared to the other two species. This study emphasizes variation in aging patterns that can be found among plant species, including those in the same genus, and provides further validation for the utility of applying the pace and shape approach in interspecific comparisons.

opencc-zeroJun 2022View details →