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Dataset results
17 results for “physiological network”
Fig. 3. Minimum spanning network for Haemoproteus and Plasmodium mitochondrial DNA cytochrome b in Spatial, temporal, molecular, and intraspecific differences of haemoparasite infection and relevant selected physiological parameters of wild birds in Georgia, USA
Fig. 3. Minimum spanning network for Haemoproteus and Plasmodium mitochondrial DNA cytochrome b haplotypes detected in four species of passerines from Georgia (USA). Circles are drawn proportional to the frequency at which haplotypes were observed. Color represents the host species from which haplotypes originated: red for Northern Cardinal (Cardinalis cardinalis), blue for Indigo Bunting (Passerina cyanea), yellow for White-throated Sparrow (Zonotrichia albicollis), and grey for Tufted Titmouse (Baeolophus bicolor). A single mutation separates nodes unless explicitly indicated by number. Letters within each node refer to Table 8 which indicates the haplotype name, sampling location, and other factors associated with hosts.
Networks of physiological adjustments and defenses, and their synergy with sodium (Na+) homeostasis explain the hidden variation for salinity tolerance across the cultivated Gossypium hirsutum germplasm
<p>The abilities to mobilize and/or sequester excess ions within and outside the plant cell are important components of salt-tolerance mechanisms. Mobilization and sequestration of Na<sup>+</sup> involves three transport systems facilitated by the plasma membrane H<sup>+</sup>/Na<sup>+</sup> antiporter (SOS1), vacuolar<i> </i>H<sup>+</sup>/Na<sup>+</sup> antiporter (NHX1), and Na<sup>+</sup>/K<sup>+</sup> transporter<i> </i>in vascular tissues (HKT1). Many of these mechanisms are conserved across the plant kingdom. While <i>Gossypium hirsutum</i> (upland cotton) is significantly more salt-tolerant relative to other crops, the critical factors contributing to the phenotypic variation hidden across the germplasm have not been fully unraveled. In this study, the spatio-temporal patterns of Na<sup>+</sup> accumulation along with other physiological and biochemical interactions were investigated at different severities of salinity across a meaningful genetic diversity panel across cultivated upland <i>Gossypium. </i>The aim was to define the importance of holistic or integrated effects relative to the direct effects of Na<sup>+</sup> homeostasis mechanisms mediated by <i>GhHKT1, GhSOS1,</i> and <i>GhNHX1. </i>Multi-dimensional physio-morphometric attributes were investigated in a systems-level context using univariate and multivariate statistics, <i>randomForest,</i> and path analysis. Results showed that mobilized or sequestered Na<sup>+</sup> contributes significantly to the baseline tolerance mechanisms. However, the observed variance in overall tolerance potential across a meaningful diversity panel were more significantly attributed to antioxidant capacity, maintenance of stomatal conductance, chlorophyll content, and divalent cation (Mg<sup>2+</sup>) contents other than Ca<sup>2+</sup> through a complex interaction with Na<sup>+</sup> homeostasis. The multi-tier macro-physiological, biochemical and molecular data generated in this study, and the networks of interactions uncovered strongly suggest that a complex physiological and biochemical synergy beyond the first-line-of defense (Na<sup>+</sup> sequestration and mobilization) accounts for the total phenotypic variance across the primary germplasm of <i>Gossypium hirsutum</i>. These findings are consistent with the recently proposed Omnigenic Theory for quantitative traits and should contribute to a modern look at phenotypic selection for salt tolerance in cotton breeding.</p>
Networks of physiological adjustments and defenses, and their synergy with sodium (Na+) homeostasis explain the hidden variation for salinity tolerance across the cultivated Gossypium hirsutum germplasm
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Rosiglitazone-targeted transcriptional networks as gene expression signature of physiological and pathological mineralization
GEO Series GSE67518. Homo sapiens. 12 samples. Type: Expression profiling by array.
Network analysis identifies temporal regulation of transcriptomic and physiological responses to early drought perception in Brassica rapa.
GEO Series GSE90841. Brassica rapa. 48 samples. Type: Expression profiling by high throughput sequencing.
Motor Network Physiology
ClinicalTrials.gov study NCT04957095. IPD Sharing: NO. Countries: 1. Publications: 0.
Multi-scale Analysis of Physiological Brain Networks
ClinicalTrials.gov study NCT03912155. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Comparative physiology and transcriptional networks underlying the heat shock response in Populus trichocarpa, Arabidopsis thaliana and Glycine max [Arabidopsis]
GEO Series GSE26197. Arabidopsis thaliana. 16 samples. Type: Expression profiling by array.
Network rewiring: physiological consequences of reciprocally exchanging the physical locations and growth-phase-dependent expression patterns of the Salmonella fis and dps genes. [RNA-Seq]
GEO Series GSE152227. Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344. 12 samples. Type: Expression profiling by high throughput sequencing.
Comparative physiology and transcriptional networks underlying the heat shock response in Populus trichocarpa, Arabidopsis thaliana and Glycine max [Soy]
GEO Series GSE26198. Glycine max. 16 samples. Type: Expression profiling by array.
Network rewiring: physiological consequences of reciprocally exchanging the physical locations and growth-phase-dependent expression patterns of the Salmonella fis and dps genes. [ChIP-Seq]
GEO Series GSE152225. Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344. 9 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Comparative physiology and transcriptional networks underlying the heat shock response in Populus trichocarpa, Arabidopsis thaliana and Glycine max [Populus]
GEO Series GSE26195. Populus trichocarpa. 16 samples. Type: Expression profiling by array.
Network rewiring: physiological consequences of reciprocally exchanging the physical locations and growth-phase-dependent expression patterns of the Salmonella fis and dps genes.
GEO Series GSE152228. Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344. 21 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Comparative physiology and transcriptional networks underlying the heat shock response in Populus trichocarpa, Arabidopsis thaliana and Glycine max
GEO Series GSE26199. Populus trichocarpa; Glycine max; Arabidopsis thaliana. 48 samples. Type: Expression profiling by array.
Systems genetics identifies a macrophage cholesterol network that associates with physiological wound healing
GEO Series GSE112171. Mus musculus. 146 samples. Type: Expression profiling by high throughput sequencing.
Comparative Physiological and Transcriptome Profiling of Grapevine Rootstocks Identified Their Physiological Adaptations and Gene Regulation Networks behind Drought Tolerance
GEO Series GSE89075. Vitis cinerea var. helleri x Vitis rupestris; Vitis vinifera; Vitis cinerea var. helleri x Vitis vinifera; Vitis cinerea var. helleri x Vitis riparia. 12 samples. Type: Expression profiling by array.
Regulatory network underlying the adaptive physiology of Pseudomonas aeruginosa under urinary tract-like conditions
GEO Series GSE33160. Pseudomonas aeruginosa; Pseudomonas aeruginosa PAO1. 12 samples. Type: Expression profiling by array.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.