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29 results for “plasticity rate”
Gamma dose rate monitoring using a Silicon Photomultiplier-based plastic scintillation detector
<p>Data set in support of the publication "Gamma dose rate monitoring using a Silicon Photomultiplier-based plastic scintillation detector". It contains measurement campaign data, radionuclide sources data, measurement count rate per radionuclide.</p>
Data from: Plasticity of thermal tolerance and its relationship with growth rate in juvenile mussels (Mytilus californianus)
Complex life cycles characterized by uncertainty at transitions between larval/juvenile and adult environments could favor irreversible physiological plasticity at such transitions. To assess whether thermal tolerance of intertidal mussels (Mytilus californianus) adjusts to post-settlement environmental conditions, we collected juveniles from their thermally buffered microhabitat from high and low-shore locations at cool (wave-exposed) and warm (wave-protected) sites. Juveniles were transplanted to unsheltered cages at the two low sites or placed in a common garden. Juveniles transplanted to the warm site for one month in summer had higher thermal tolerance, regardless of origin site. In contrast, common-garden juveniles from all sites had lower tolerance indistinguishable from exposed-site transplants. After six months in the field plus a common garden period, there was a trend for higher thermal tolerance at the protected site, while reduced thermal tolerance at both sites indicated seasonal acclimatization. Thermal tolerance and growth rate were inversely related after one but not six months; protected-site transplants were more tolerant but grew more slowly. In contrast to juveniles, adults from low-shore exposed and protected sites retained differences in thermal tolerance after common garden treatment in summer. Both irreversible and reversible forms of plasticity must be considered in organismal responses to changing environments.
Environmental change and the rate of phenotypic plasticity
<p class="TREEsubmission"><span>With rapid and less predictable environmental change emerging as the 'new norm', understanding how individuals tolerate environmental stress via plastic, often reversible changes to the phenotype (i.e. reversible phenotypic plasticity, RPP) remains a key issue in ecology. Here, we examine the potential for better understanding how organisms overcome environmental challenges within their own lifetimes by scrutinizing a somewhat overlooked aspect of RPP, namely the rate at which it can occur. Whilst recent advances in the field provide indication of the aspects of environmental change where RPP rates may be of particular ecological relevance, we observe that current theoretical models do not consider the evolutionary potential of the rate of RPP. Although, recent theory underscores the importance of environmental predictability in determining the slope of the evolved reaction norm for a given trait (i.e. how much plasticity can occur), a hitherto neglected possibility is that the rate of plasticity might be a more dynamic component of this relationship than previously assumed. If the rate of plasticity itself can evolve, as empirical evidence foreshadows rates of plasticity may have the potential to alter the level predictability in the environment as perceived by the organism and thus influence the slope of the evolved reaction norm. However, optimality in the rate of phenotypic plasticity, its evolutionary dynamics in different environments and influence of constraints imposed by associated costs remain unexplored and may represent fruitful avenues of exploration in future theoretical and empirical treatments of the topic. We conclude by reviewing published studies of RPP rates, providing suggestions for improving the measurement of RPP rates, both in terms of experimental design and in the statistical quantification of this component of plasticity.</span></p> <p> </p>
Rates of phenotypic plasticity in thermal tolerance
<p><span>An individual's fitness cost associated with environmental change likely depends on the rate of adaptive phenotypic plasticity, and yet our understanding of plasticity rates in an ecological and evolutionary context remains limited. We provide the first quantitative synthesis of existing plasticity rate data, focusing on acclimation of temperature tolerance in ectothermic animals, where we demonstrate applicability of a recently proposed analytical approach. The analyses reveal considerable variation in plasticity rates of this trait among species, with half-times (how long it takes for the initial deviation from the acclimated phenotype to be reduced by 50% when individuals are shifted to a new environment) ranging from 3.7 to 770.2 h. Furthermore, rates differ among higher taxa, being higher for amphibians and reptiles than for crustaceans and fishes, and with insects being intermediate. We argue that a more comprehensive understanding of phenotypic plasticity will be attained through increased focus on the rate parameter.</span></p>
Data from: Plasticity of thermal tolerance and its relationship with growth rate in juvenile mussels (Mytilus californianus)
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Support for the climatic variability hypothesis depends on the type of thermal plasticity: lessons from predation rates
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Rates of phenotypic plasticity in thermal tolerance
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Data from: Plasticity rates and capacities differ across traits and temperatures: Insights from physiological responses of aquatic organisms to salinity change
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Environmental change and the rate of phenotypic plasticity
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High strain rate micro-compression for crystal plasticity constitutive law parameters identification
<p>Experimental data and numerical model attached to the article "High strain rate micro-compression for crystal plasticity constitutive law parameters identification" (DOI to be generated soon)</p>
Data from: Cold adaptation increases rates of nutrient flow and metabolic plasticity during cold exposure in Drosophila melanogaster
Metabolic flexibility is an important component of adaptation to stressful environments, including thermal stress and latitudinal adaptation. A long history of population genetic studies suggest that selection on core metabolic enzymes may shape life histories by altering metabolic flux. However, the direct relationship between selection on thermal stress hardiness and metabolic flux has not previously been tested. We investigated flexibility of nutrient catabolism during cold stress in Drosophila melanogaster artificially selected for fast or slow recovery from chill coma (i.e. cold-hardy or -susceptible), specifically testing the hypothesis that stress adaptation increases metabolic turnover. Using 13C-labelled glucose, we first showed that cold-hardy flies more rapidly incorporate ingested carbon into amino acids and newly synthesized glucose, permitting rapid synthesis of proline, a compound shown elsewhere to improve survival of cold stress. Second, using glucose and leucine tracers we showed that cold-hardy flies had higher oxidation rates than cold-susceptible flies before cold exposure, similar oxidation rates during cold exposure, and returned to higher oxidation rates during recovery. Additionally, cold-hardy flies transferred compounds among body pools more rapidly during cold exposure and recovery. Increased metabolic turnover may allow cold-adapted flies to better prepare for, resist and repair/tolerate cold damage. This work illustrates for the first time differences in nutrient fluxes associated with cold adaptation, suggesting that metabolic costs associated with cold hardiness could invoke resource-based trade-offs that shape life histories.
Data from: Maternal effects in a wild songbird are environmentally plastic but only marginally alter the rate of adaptation
Despite ample evidence for the presence of maternal effects (MEs) in a variety of traits and strong theoretical indications for their evolutionary consequences, empirical evidence to what extent MEs can influence evolutionary responses to selection remains ambiguous. We tested the degree to which MEs can alter the rate of adaptation of a key life-history trait, clutch size, using an individual-based model approach parameterized with experimental data from a long-term study of great tits (Parus major). We modeled two types of MEs: (i) an environmentally plastic ME, in which the relationship between maternal and offspring clutch size depended on the maternal environment via offspring condition, and (ii) a fixed ME, in which this relationship was constant. Although both types of ME affected the rate of adaptation following an abrupt environmental shift, the overall effects were small. We conclude that evolutionary consequences of MEs are modest at best in our study system, at least for the trait and the particular type of ME we considered here. A closer link between theoretical and empirical work on MEs would hence be useful to obtain accurate predictions about the evolutionary consequences of MEs more generally.
Postnatal growth rate varies with latitude in range-expanding geese – the role of plasticity and day length
<p>This dataset contains data from an analysis of differences in growth rate among three different barnacle populations breeding at different latitudes, described in the paper:<br> Boom, Michiel P., van der Jeugd, H.P., Steffani, B., Nolet, B.A., Larsson, K., & Eichhorn, G. (2021), Postnatal growth rate varies with latitude in range-expanding geese – the role of plasticity and day length. <em>Journal of Animal Ecology.</em></p> <p>The postnatal growth period is a crucial life stage, with potential lifelong effects on an animal's fitness. How fast animals grow depends on their life history strategy and rearing environment, and interspecific comparisons generally show higher growth rates at higher latitudes. However, to elucidate the mechanisms behind this gradient in growth rate, intraspecific comparisons are needed.</p> <p>Recently, barnacle geese expanded their Arctic breeding range from the Russian Barents Sea coast southwards, and now also breed along the Baltic and North Sea coasts. Baltic breeders shortened their migration, while barnacle geese breeding along the North Sea stopped migrating entirely.</p> <p>We collected cross-sectional data on gosling tarsus length, head length and body mass, and constructed population-specific growth curves to compare growth rates among three populations (Barents Sea, Baltic Sea and North Sea) spanning 17° in latitude.</p> <p>Growth rate was faster at higher latitudes, and the gradient resembled the latitudinal gradient previously observed in an interspecific comparison of precocial species. Differences in day length among the three breeding regions could largely explain the observed differences in growth rate. In the Baltic, and especially in the Arctic population, growth rate was slower later in the season, most likely because of the stronger seasonal decline in food quality.</p> <p>Our results suggest that differences in postnatal growth rate between the Arctic and temperate populations are mainly a plastic response to local environmental conditions. This plasticity can increase the individuals' ability to cope with annual variation in local conditions, but can also increase the potential to re-distribute and adapt to new breeding environments. </p>
Individual-based simulations for: Population rescue through an increase of the selfing rate under pollen limitation: Plasticity vs. evolution
<p>The file contains the individual-based simulation code that is used in the paper "Population rescue through an increase of the selfing rate under pollen limitation: plasticity vs. evolution". This study built eco-evolutionary models and individual-based simulations to explore the demographic and genetic conditions in which higher self-fertilization by plasticity and/or evolution rescues populations, following deficits due to sudden onset of pollen limitation. The code is written in C++. Please first read the README.txt file for instructions and details.</p>
Data from: Maternal effects in a wild songbird are environmentally plastic but only marginally alter the rate of adaptation
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Data from: Temperature-dependent growth and fission rate plasticity drive seasonal and geographic changes in body size in a clonal sea anemone
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Individual-based simulations for: Population rescue through an increase of the selfing rate under pollen limitation: Plasticity vs. evolution
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Data from: Is the enhanced dispersal rate seen at invasion fronts a behaviourally plastic response to encountering novel ecological conditions?
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Data from: Cold adaptation increases rates of nutrient flow and metabolic plasticity during cold exposure in Drosophila melanogaster
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Data from: Plastic but not adaptive: habitat-driven differences in metabolic rate despite no differences in selection between habitats
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
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DANDI Archive for NWB datasets
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International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.