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63 results for “requirements management”
Dataset for ELGO-DIMITRA Data Management Practices & Requirements: A Scoping Report
<p>This is a comprehensive data repository of the <em>data management survey</em> carried out in Autumn of 2023 through a collaboration between the <a href="https://opensciencestudies.eu/">PHIL_OS</a> project and the <a href="https://agres.elgo.gr/">Research Directorate of the Hellenic Agricultural Organization ELGO-DIMITRA</a>.</p> <p>Please cite as: </p> <blockquote> <p>Tsiroukis F., Leonelli S. and ELGO-DIMITRA (2024) <em>Dataset for ELGO-DIMITRA Data Management Practices & Requirements: A Scoping Report.</em> PHIL_OS Report. DOI: 10.5281/zenodo.14003418</p> </blockquote>
Research Data Management and Sharing for images: beautiful fountains require ugly piping!
<p>The consensus is clear: research data funded by public resources should be shared. Globally, the advantages of sharing research data are widely recognized. It promotes transparency and validation, reduces redundant efforts, accelerates discovery, enhances equity, and increases the impact of research through collaboration and efficient use of resources.</p> <p>Image data, however, presents unique challenges. Advanced technologies produce large, multimodal, and multiplexed datasets that span multiple targets across various spatiotemporal scales.</p> <p>This image data comes from a range of sources—such as optical, electron microscopy, and medical imaging—each with specific technical requirements. Managing this complexity is a daunting task without global metadata standardization as well as robust Research Data Management and Sharing (RDMS) cyberinfrastructure to bring it all together.</p> <p>The figure illustrates a common issue: while the importance of the <strong>“beautiful fountains”</strong> of scientific discoveries and medical treatments is widely understood, fewer people recognize the <strong>need to invest in building the often ignored “ugly plumbing” </strong>required to build a strong RDMS cyberinfrastructure.</p> <p> </p>
MADFORWATER: WP3: Adaptation of technologies for efficient water management and treated wastewater reuse in agriculture: Task3.1: Reduction of crop water requirement and tools for irrigation management with treated WW: Subtask 3.1.1: Plant Growth Promotion (PGP) bacteria to enhance crop resistance to water stress and salinity: Subset1
<p>This dataset contains the data underlying the following publication: Mouna Mahjoubi, Simone Cappello, Yasmine Souissi, Atef Jaouani and Ameur Cherif (February 7th 2018). Microbial Bioremediation of Petroleum Hydrocarbon– Contaminated Marine Environments, Recent Insights in Petroleum Science and Engineering Mansoor Zoveidavianpoor, IntechOpen, DOI: 10.5772/intechopen.72207</p> <p> </p>
Managing the tradeoff between reproduction and survival requires flexibility in behavior and gene regulation in three-spined stickleback
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Data from: Different strokes for different croaks: Using an African reed frog species complex as a model to understand idiosyncratic population requirements for conservation management
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Dataset belonging to SNF project: Use of physiologically based pharmacokinetic modelling to simulate dosing requirements of long-acting intramuscular antiretroviral drugs in special populations and to manage drug-drug interactions
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MADFORWATER: WP3: Adaptation of technologies for efficient water management and treated wastewater reuse in agriculture: Task3.1: Reduction of crop water requirement and tools for irrigation management with treated WW: Subtask 3.1.1: Plant Growth Promotion (PGP) bacteria to enhance crop resistance to water stress and salinity: Subset2
<p>This dataset contains the data underlying the following publication: Hassen W, Neifar M, Cherif H, Najjari A, Chouchane H, Driouich RC, Salah A, Naili F, Mosbah A, Souissi Y, Raddadi N, Ouzari HI, Fava F and Cherif A (2018) Pseudomonas rhizophila S211, a New Plant Growth-Promoting Rhizobacterium with Potential in Pesticide-Bioremediation. Front. Microbiol. 9:34. doi: 10.3389/fmicb.2018.00034</p>
Supporting information for: The Time Requirements for Primary Care Consultations: Initial Sick Child Visits in Low- and Middle-income Countries Using the Integrated Management of Childhood Illness (IMCI) Clinical Algorithm
<p>Few studies have examined the time required for primary care consultations; none have focused on sick child visits in low- and middle-income countries (LMICs). This project begins to fill that gap by providing evidence-based estimates of the time needed for initial visits with under-five infants and children at public or not-for-profit facilities in countries using the Integrated Management of Childhood Illness (IMCI) clinical algorithm.</p> <p>Estimates of the mean expected duration of IMCI consultations require (a) classification profiles, i.e., tabulations of the gold standard health issues presented by patients less than 5 years old; (b) lists of the tasks included in applicable versions of the IMCI algorithm and the conditions that elicit them, and (c) an estimate of the time needed to perform tasks with no pre-defined minimum duration. The latter requires, in addition to classification profiles, information on rates of task performance and the mean observed duration of consultations.</p> <p>The IMCI clinical algorithm and the research surrounding it provide unusually rich sources of such information. Developed in the mid 1990s by the World Health Organization and the United Nations Children’s Fund, the IMCI algorithm seeks to reduce child mortality in LMICs by improving the technical quality of primary care services. For infants less than 2 months old, the algorithm focuses on bacterial infections, feeding problems, low weight, and, in some versions, jaundice. For children 2-59 months old, the foci include acute respiratory infections, especially pneumonia; diarrhea; fevers, especially malaria and measles; malnutrition, and anemia. Immunization status is a concern for both age groups. The algorithm provides a scheme to classify the health issues with which infants and children present, an array of tasks providers may be expected perform, and criteria by which tasks are elicited. Research on the design and utility of the algorithm, its effects on provider performance, and related topics furnishes data on the prevalence of gold standard IMCI classifications in a variety of patient populations. In some cases, it also enables one to calculate the time required to perform tasks.</p> <p>I found such information by searching MEDLINE, the database of the International Network for Rational Use of Medicines, the websites of the WHO and its regional offices, GOOGLE, and GOOGLE SCHOLAR using search terms such as ‘Integrated Management of Childhood Illness’, ‘observational’, ‘prospective’, ‘classification’, ‘clinical signs’, ‘health facility survey’, and ‘validity’. I also reviewed studies that cited a qualified study and, conversely, material included in the bibliographies of qualified studies.</p> <p>The supplemental information files contain the following:</p> <p>WORKBOOK S1_STUDIES USED</p> <p>Lists features of, and sources for, the studies used to construct classification profiles and to estimate the time required to perform the average task with no predefined minimum duration. With 2 exceptions (see below, DATA S1 and DATA S2), all the studies have been published or are readily available on the internet. None of the data can be used to identify individuals.</p> <p>DATA S1_REPORT OF THE HEALTH FACILITY SURVEY IN BOTSWANA, 2007-08 and DATA S2_REPORT OF THE HEALTH FACILITY SURVEY IN TANZANIA, 2003</p> <p>PDF files of Health Facility Survey reports that were found on the internet but have since been taken down.</p> <p>DATA S3_BURKINA FASO CHART BOOKLET, 2015</p> <p>PDF provided <span>Drs. Sophie Sarrassat (London School of Hygiene and Tropical Medicine) and Serge M. A. Somda (Université Nazi BONI).</span></p> <p>WORKBOOK S2_CLASSIFICATION PROFILES: INFANTS; WORKBOOK S3_CLASSIFICATION PROFILES: CHILDREN IN UPPER MIDDLE-INCOME COUNTRIES; WORKBOOK S4_CLASSIFICATION PROFILES: CHILDREN IN LOWER MIDDLE-INCOME COUNTRIES (I); WORKBOOK S5_CLASSIFICATION PROFILES: CHILDREN IN LOWER MIDDLE-INCOME COUNTRIES (II), and WORKBOOK S6_CLASSIFICATION PROFILES: CHILDREN IN LOW INCOME COUNTRIES </p> <p>The design of the worksheets in these workbooks is described in TEXT S1_NOTES OF THE CONSTRUCTION OF CLASSIFICATION PROFILES (see below).</p> <p>WORKBOOK S7_IMCI CLINICAL TASKS</p> <p>Lists the clinical tasks provided by relevant IMCI algorithms for the care of infants and children. Consists of 6 worksheets covering mandatory tasks, conditional assessments, and treatment and counseling tasks for infants and children.</p> <p>WORKBOOK S8_MINUTES PER TASK WITH NO MINIMUM DURATION</p> <p>Provides estimate of the mean time required to perform a task with no minimum duration for each of 7 populations for which the required data are available, corrected, where necessary, for the effect of an observer on the rate and pace of task performance. Also provides a geometric mean for all 7 populations.</p> <p>TEXT S1_NOTES ON METHODOLOGY</p> <p>WORD document describing the steps involved in estimating the expected durations of consultations.</p> <p>TEXT S2_NOTES OF THE CONSTRUCTION OF CLASSIFICATION PROFILES</p> <p>WORD document describing the steps involved in constructing each profile, problems encountered, and how they were solved.</p> <p>TEXT S3_NOTES ON THE IDENTIFICATION OF IMCI CLINICAL TASKS</p> <p>WORD document describing the standards used in identifying clinical tasks in IMCI algorithms.</p> <p>TEXT S4_NOTES ON THE ESTIMATION OF MINUTES PER TASK WITH NO MINIMUM DURATION</p> <p>WORD document describing the steps involved in estimating the mean time required to perform a task with no predefined minimum duration, problems encountered, and how they were solved.</p>
Effective management for deadwood-dwelling lichen diversity requires landscape-scale habitat protection
<ol> <li>Habitat loss is considered a major threat for biodiversity. However, the scales on which its effects occur are still insufficiently understood, namely, is the amount of available habitat important for species richness on both local and landscape scales? We studied the effects of local and landscape-scale habitat amount on local-scale species density of deadwood-dependent lichens in Swedish boreal forests. Creation and retention of dead wood are common practices to benefit forest biodiversity, and recognizing the relevant scale is critical for them to be successful.</li> <li>We surveyed deadwood-dependent lichens in 90 unmanaged forest stands that differed in the local and landscape habitat amount. The local habitat amount was measured as the amount of dead wood in the sampled stands (m<sup>2</sup> dead wood/ha), while six alternative proxies were used to estimate the landscape habitat amount, i.e., the amount of dead wood in the landscapes surrounding the sampled forest stands. Lichen species density (number of species per standardized dead wood area of 3.7 m<sup>2</sup>) was modelled as a function of local habitat amount and landscape habitat amount at multiple scales (300 m – 5 km from the stands).</li> <li>We found that lichen species density increased with the landscape habitat amount. The proportion of old forests (> 100 years, including newly clear-cut stands that until recently were old forests) within 5 km from the studied stands explained species density better than the other proxies of landscape habitat amount. Local dead wood amount did not affect species density, and there was no interaction between the local and landscape habitat amount. </li> <li> <em>Synthesis and applications</em>: To promote the conservation of deadwood-dependent lichens, the amount of old forests in managed forest landscapes should be maintained or increased. A certain amount of dead wood hosted more lichen species when situated in a landscape with more old forest, while there was no effect of the local dead wood amount. This suggests that management aimed at increasing the local species density of deadwood-dwelling lichens should focus on creating and maintaining habitat in the surrounding landscape rather than on only adding deadwood to that local site. In other words, effective management for deadwood-dependent lichen diversity requires landscape-scale habitat protection.</li> </ol>
A Phase 3, Long-Term Safety Study of Subcutaneous Epoetin Hospira in Patients With Chronic Renal Failure Requiring Hemodialysis and Receiving Epoetin Maintenance Treatment. AiME -Anemia Management Wit
ClinicalTrials.gov study NCT01628120. IPD Sharing: Not stated. Countries: 1. Publications: 1.
Efficacy and Safety of Diazepam in the Management of Refractory Epilepsy in Selected Patients Who Require Intermittent Medical Intervention for Acute Repetitive Seizures.
ClinicalTrials.gov study NCT00319501. IPD Sharing: Not stated. Countries: 1. Publications: 1.
A Phase 3, Long-Term Safety Study of Intravenous Epoetin Hospira in Patients With Chronic Renal Failure Requiring Hemodialysis and Receiving Epoetin Maintenance Treatment. AiME - Anemia Management Wit
ClinicalTrials.gov study NCT01628107. IPD Sharing: Not stated. Countries: 2. Publications: 1.
Effective management for deadwood-dwelling lichen diversity requires landscape-scale habitat protection
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Data from: Managing hydropower dam releases for water users and imperiled fishes with contrasting thermal habitat requirements
1) The construction of dams on large rivers has negative impacts on native species. Environmental flows have been proposed as a tool to mitigate these impacts, but in order for these strategies to be effective they must account for disparate temperature and flow needs of different species. 2) We applied a multi-objective approach to identify tradeoffs in dam release discharge and temperature for imperiled warm- and cold-water fishes while simultaneously meeting the needs of human water users. 3) Using the Sacramento River (California, USA) as a case study, our model suggests that current management aimed at conserving an endangered cold-water species (winter-run Chinook salmon; Oncorhynchus tshawytscha) and providing high discharge for downstream water users has detrimental impacts on a threatened warm-water species (green sturgeon; Acipenser medirostris). 4) We developed an optimal dam release scenario that can be used to meet the needs of salmon, sturgeon, and human water users. Our results show that dam releases can be managed to successfully achieve these multiple objectives in all but the most severe drought years. Synthesis and applications This study shows that managing dam releases to meet the needs of a single species can have detrimental effects on other native species with different flow and temperature requirements. We applied a multi-objective approach to balance environmental requirements of multiple species with the needs of human water users. Our findings can be used to guide management of Shasta Dam and our approach can be applied to achieve multi-object management goals in other impounded rivers beyond California's Sacramento River.
Dataset belonging to SNF project: Use of physiologically based pharmacokinetic modelling to simulate dosing requirements of long-acting intramuscular antiretroviral drugs in special populations and to manage drug-drug interactions
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Appendix 5: Supplementary data for Chapter 4 in the thesis: 'Quantifying the natural resource requirements of terrestrial ecosystems for managing biodiversity alongside human development'
<p>Appendix 5: Supplementary data for Chapter 4 in the thesis: 'Quantifying the natural resource requirements of terrestrial ecosystems for managing biodiversity alongside human development' by Adam R. Mason, Department of Civil and Environmental Engineering, Imperial College London</p>
Appendix 4: Supplementary data for Chapter 3 in the thesis: 'Quantifying the natural resource requirements of terrestrial ecosystems for the management of biodiversity alongside human development'
<p>Appendix 4: Supplementary data for Chapter 3 in the thesis: 'Quantifying the natural resource requirements of terrestrial ecosystems for managing biodiversity alongside human development' by Adam R. Mason, Department of Civil and Environmental Engineering, Imperial College London</p>
Appendix 6: Supplementary data for Chapter 5 in the thesis: 'Quantifying the natural resource requirements of terrestrial ecosystems for managing biodiversity alongside human development'
<p>Appendix 6: Supplementary data for Chapter 5 in the thesis: 'Quantifying the natural resource requirements of terrestrial ecosystems for managing biodiversity alongside human development' by Adam R. Mason, Department of Civil and Environmental Engineering, Imperial College London</p>
SECO-RCR: A Tool to Manage Requirements Change in Software Ecosystems
<p>Video de apresentação para a ferramenta SECO-RCR submetido ao SBES Tools 2024.</p>
Supplementary material of Investigating User Feedback from a Crowd in Requirements Management in Software Ecosystems
<p>Supplementary material of Investigating User Feedback from a Crowd in Requirements Management in Software Ecosystems.</p>
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.