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opencc-by-4.0Jun 2024View details →

Supplement to "Discriminating non-stationary flood hazard effects via probabilistic estimation of sparse residuals from rescued and rated stage–discharge data"

This supplement contains the data and script associated with “Sparse hydrometric data rescue for exploratory analyses of conveyance-driven flood hazard trends and controls,” which has been submitted to a journal for consideration. This supplement is deposited on Zenodo.   Code, Data, and Attribute Descriptions   Uploaded are five directories (indicated in bold font, with their contents detailed below) containing input data and various outputs of the analyses performed for our case study on the Pulangi River at Lumayong (Philippines). Please consider this description equivalent to an omnibus README file for the deposited files. Note that we collected and rescued the hydrometric data herein from the archives of the Water Projects Division (WPD) of the Philippine Department of Public Works and Highways (DPWH).   ●      Pln_R_code contains (1) Pln_RC.R, the R script file, and (2) 240601_Pln_RC.RData, which stores objects generated from the script based on the last execution (on 1 June 2024). The script consists of admittedly too many lines of code (e.g., for data wrangling, formal analyses, and producing figures used in the manuscript) that should have been split into multiple .R files. Apologies. Please be guided by the outline and the comments and kindly reach out lest issues with the code arise.   ●      Pln_GH_PDFs contains the scanned gaugekeeper’s reports of gauge heights (“stages”).    ○      The name of each file varies. For example, Pln-GH-1100.pdf contains daily stage readings for all months in the year 2011. But, if the last two digits are not zeroes, as in Pln-GH-1204.pdf, they refer to the month of that year; in this case, for example, the PDF file contains stage data for the month of April in the year 2012. ○      Each scanned sheet contains sub-daily (with readings at “AM,” “NOON,” and “PM”) and mean daily stages for a given month. ○      Also indicated are the gaugekeeper’s remarks on the daily weather (e.g., “fair,” “cloudy”). Under inclement weather, the gaugekeeper would note the duration of rainfall and its intensity and might, at times, record extra stage readings.   ●      Pln_DM_PDFs contains the following PDF files and a sub-directory: ○      Pln-DM-<XXXXXX>.pdf contains the scanned log for each direct stage—discharge measurement, otherwise known as “gaugings.” Each file is named according to the date of gauging (YYMMDD). For example, the log for the gauging performed on 24 February 2011 can be found in the file Pln-DM-110224.pdf. Data from these gaugings are summarized in Pln-DM-filtered.csv in the Pln_In_CSVs directory. ■      The readability of each file varies based on the original quality of the original paper-format data. ■      The first page in each file contains, on the left side, a summary of the gauging data and metadata (e.g., date of measurement, number of gauging verticals or “sections” used, method of crossing or measuring the cross-section), and on the right side, the velocity—area readings at each gauging vertical. ■      The second page in each file contains the plotted cross-section of the channel at the time of measurement. ○      Pln-RC.pdf contains various other paper-format data and some annotations relevant to the historical rating at the station. ■      P. 1: The hydrographic engineer’s comment (dated 19 January 2012) on the evaluation of the discharge data, specifically detailing the periods of validity of the rating curves developed for different sub-periods of monitoring. ■      PP. 2—3: A summary table of all the gaugings performed from 1983 to 2010 whose logs were no longer retrievable (and hence not included as a DM-PDF file in this directory). ■      PP. 4—5: Plots of the official stage—discharge rating curves developed by DPWH hydrographers. ■      PP. 6—8: Rating tables used to convert daily mean stages to deterministic discharge estimates. Two of these rating tables were digitized and can be found in the Pln_RatingTables sub-directory in Pln_In_CSVs. ■      PP. 9—22: Daily stage (m) and its corresponding daily discharge (L/s) for the 2004—2010 sub-period. The stages were digitized and included in Pln-H_arch.csv in the Pln_In_CSVs directory. ○      Pln_DM_unused contains the PDF files of logs (including data and metadata) corresponding to the gaugings that were excluded from our analysis following our filtering step for gauging location consistency.   ●      Pln_In_CSVs contains the following CSV files and two sub-directories; these files were used as inputs to the R script for formal analyses: ○      Pln-H_arch.csv contains the mean daily stage values [“H_bar_arch”] (m) for every day in the 2004—2020 sub-period [“Date”] (YYYY-MM-DD). The stages in this file are already corrected for gross errors. ○      Pln-DM-filtered.csv contains the following information on the gaugings performed on the Pulangi at Lumayong (1983—2020): (i) date [“Date”] (YYYY-MM-DD); (ii) stage [“H”] (m); (iii) discharge in L/s [“Q_lps”] and m3/s [“Q_cms”]; (iv) wetted area [“A_sqm”] (m2); (v) mean flow velocity [“Vel_mps”] (m/s); (vi) channel width [“W_m”] (m); (vii) mean flow depth [“D_ave_m”] (m); (viii) location of the measurement cross-section with respect to the staff gauge, with negative values meaning downstream of the gauge and positive values meaning upstream of the gauge [“XS_loc_wrt_gage”]; (ix) maximum flow depth [“Max_Depth_m”] (m); and (x) minimum streambed elevation [“MINSBE”] (m). Note that this file includes only gaugings that passed our filtering step for measurement location consistency. ○      Pln-DM_oview.csv contains information on the temporal coverage (bounded by “Start_date” and “End_date”) of the available hydrometric data from the station archives. ○      Pln-H_sample_GrossE_corr.csv contains a sample sub-period (2017-06-15 through 2017-11-30) and the corresponding values of stages (m), uncorrected [“H_uncorrected”] and corrected for gross errors [“H_corrected”]. This CSV file was used as an input to the R script to produce one of the figures in the manuscript.  ○      Pln-XS-csv.csv contains data on the gauging transects: gauging ID [“GaugingID”]; date [“Date”] (YYYY-MM-DD); lateral distance from a fixed initial point [“Lat_distance”] (m); width of the gauging vertical [“Width_vert..m.”] (m); depth relative to the water surface [“Depth..m.”] (m); stage at the gauging vertical [“H_m_vert..m.”] (m); and elevation with respect to a fixed arbitrary datum at the station [“Elev..m.”] (m). ○      Pln_Rating_Tables contains two rating tables, Pln-DM - RatingTable_A.csv and Pln-DM - RatingTable_B.csv, prepared and used by DPWH hydrographers for converting stage values to deterministic discharge estimates for the Pulangi River at Lumayong for the 1980s—early 2000s sub-period. Each rating table contains columns for stage [“H”], discharge in L/s [“Q_lps”], and discharge in m3/s [“Q_cms”]. ○      Pln_Q_rated contains two CSV files: Pulangi.csv has the columns “YEAR”, “DAY”, and every month of the year [“JAN” through “DEC”] for the 1983—2003 sub-period, with the values under each month column indicating the deterministic discharge estimates in L/s; Pulangi_trunc.csv contains similarly formatted data, but for the 2009—2010 sub-period.   ●      Pln_Out_CSVs contains two CSV files, the primary outputs of the hydrometric data rescue effort. ○      Pln_Q_recon.csv contains the reconstructed discharge time series (1983—2020) and its associated uncertainties at the 95% credibility interval. It has the following columns: date [“Date”] (YYYY-MM-DD); daily stage [“H”] (m); lower bound of the discharge estimate [“Q_lwr”] (m3/s); median discharge estimate [“Q_med”] (m3/s); and the upper bound of the discharge estimate [“Q_upr”] (m3/s). Pln_H_recon.csv contains the reconstructed and quality-controlled stage time series (1983—2020). It has the following columns: date [“Date”] (YYYY-MM-DD); mean daily stage that has been corrected for gross errors, but not yet filtered through other quality checks [“H_bar_arch”] (m); quality check for low outliers [“Low_Outlier”] (TRUE/FALSE); quality check for flatliners [“Flatliner”] (TRUE/FALSE); difference between the stage values on day i and day i-1 [“Daily_Step”] (m); quality check for large steps [“Large_Step”] (TRUE/FALSE); and the corrected and quality-controlled mean daily stage values [“H”] (m).

opencc-by-4.0Mar 2015View details →

Fig. 1 in Toxicities and residual effects of toxic baits containing spinosad or malathion to control the adult Anastrepha fraterculus (Diptera: Tephritidae)

Fig. 1. The mortality of Anastrepha fraterculus adult afer 1, 3, 5 and 7 days of exposure to toxic baits. (Vertical bars indicate the standard error of the mean). Mortality was calculated by the formula of Schneider-Orelli (1947).

opencc-by-4.0Jul 2024View details →

Experimental data related to the publication: "In-situ analysis of the effect of residual fcc phase and special grain boundaries on the deformation dynamics in pure cobalt"

The article figures were produced solely from these data sets employing data processing methods described therein. For experimental conditions and naming conventions please refer to the paper. 1. Deformation data files contained within "deformation_data.zip": The .zip archive contains five files related to five samples of thermally treated cobalt: def_co600.csv def_co800.csv def_co1100.csv def_co1100-10c.csv def_co1100-20c.csv The data were recorded during compression of the above-listed samples at room temperature.  2. Acoustic emission (AE) data files contained within "AE_data.zip": The .zip archive contains four files related to four samples of thermally treated cobalt: AE_co600.wav AE_co800.wav AE_co1100.wav AE_co1100-20c.wav The AE data were recorded in continuous mode ("data streaming" at 2 MHz) during compression of the above-listed samples at room temperature.     3. Electron back-scatter diffraction (EBSD) data files contained within "EBSD_data.zip": The .zip archive contains fifty-three .osc files related to samples of as-drawn and thermally treated cobalt within four folders: 0c - as-drawn and annealed samples (i.e. without thermal cycling) 10c - annealed samples after thermal cycling of 10 cycles 20c - annealed samples after thermal cycling of 20 cycles ex-situ_def - ex-situ EBSD during deformation of selected samples The .osc data files represent EBSD data after clean-up procedures described in detail in the manuscript.

opencc-by-4.0Oct 2024View details →

Length of day residuals after the removal of tidal friction, glacial isostatic adjustment, and climatic effects: 720 BC to 2020

LOD residuals after the removal of tidal friction, glacial isostatic adjustment, and climatic effects. Time range 720 BC to 2020 AD. Data are with respect to 2020. First column: time in year (negative years mean BC) Second column: LOD residuals in milliseconds Third column: uncertainty of the LOD residuals in milliseconds If you use the data, please cite the following references: 1. The increasingly dominant role of climate change on length of day variations: Kiani Shahvandi et al. 2024 published in PNAS, https://doi.org/10.1073/pnas.2406930121 2. Length of day variations explained in a Bayesian framework: Kiani Shahvandi et al. 2024 published in GRL 3. Addendum 2020 to ‘Measurement of the Earth’s rotation: 720 BC to AD 2015’: Morrison et al. 2021 published in Proceedings of the Royal Society A, https://doi.org/10.1098/rspa.2020.0776

dryad36/100

Data from: Widespread bird species show idiosyncratic responses in residual body mass to selective logging and edge effects in the Colombian Western Andes

This dataset consists of banding data (N = 1589 captures, 129 bird species), including morphological and breeding biology measures, collected from understory birds in subtropical cloudforest at roughly 2000 m.a.s.l. in the municipality of El Cairo in Colombia's Western Andes (Serrania de los Paraguas range). Roughly 8,350 net hours were divided into two three-month field seasons (June-August 2017 and January-March 2018), both corresponding to local dry seasons. Birds were banded along 500-meter transects in forest interior across a gradient of forest fragment patch sizes (N = 8 fragments, area range = 10-173 ha) and a private ~750 ha reserve (Reserva Natural Cerro El Ingles) in the same landscape. Each non-hummingbird capture was fitted with an aluminum leg band with a unique combination, and we collected data on mass, tarsus length, wing chord, pectoral muscle score, cloacal protuberance and brood patch score, and age and sex (where possible due to plumage differences). We captured 101 species (including 6 boreal migrants) in 844 captures (53%) during the January-March sampling period and 102 species in 745 captures during the June-August sampling period; each site was sampled during both sampling periods. The most captured bird families were Trochilidae (24 spp., 36% of total captures), Thraupidae (17 spp.), Tyrannidae (16 spp.), Furnariidae (14 spp.), and Turdidae (6 spp.). A subset of these data (uploaded as a separate file) were used to calculate body condition indices for 20 species of commonly captured birds (N = 984 captures) that occured across much of the patch size gradient (at least 8 out of 14 transects), and were related to fragment area and measures of edge and selective logging effects (see Jones et al. 2022). In this file, we include all predictor variables necessary to run the generalized linear mixed models in Jones et al. (2022), including proportion forest cover within 1 km (a proxy for patch size), edge density, average distance to forest edge from the netting transect, average canopy cover and height along the transect, multivariate measures of understory plant density, large-diameter tree density, and vertical vegetation structure, elevation of each transect, and average yearly rainfall for each transect.

opencc-zeroJul 2022View details →

zenodo36/100

Gastric Residual Volume, Safety and Effectiveness of Drinking 250ml Glucose Solution 2-3 Hours before Surgery in Gastric Cancer Patients: A Multicenter, Single-blind, Randomized Controlled Trial

Supplementary Figure 1   A. Change of QUICKI level after surgery Post-OP: right after operation; POD: post-operation day; Mixed linear model statistics showed that the effect of time ( p=0.004) was significant, but no significant differences were noted for group(P=0.600) or group*time(P=0.963). B. Change of Recovery Level of QUICKI after surgery Post-OP: right after operation; POD: post-operation day; Mixed linear model statistics showed that no significant differences were noted for group(P=0.600) ,time (P=0.235) or group×time(P=0.963). C. Change of WBC level after surgery Post-OP: right after operation; POD: post-operation day; Mixed linear model statistics showed that the effect of time ( p<0.001) was significant, and no significant differences were noted for group(P=0.392) or group×time(P=0.314). D. Change of CRP level after surgery Post-OP: right after operation; POD: post-operation day; Mixed linear model statistics showed that the effect of time ( p<0.001) was significant, but no significant differences were noted for group(P=0.312) or group × time(P=0.826).

opencc-by-4.0Sep 2022View details →

zenodo36/100

Effect of freshwater discharge from estuary dam on residual circulation in bifurcated channel

Zip-files contain matlab m-files and raw data of transects data in Yeoungsan Rver estuary. The code was designed to analysis the changes from the raw data. During freshwater discharge.zip file contains data set with a freshwater impact from a estuary dam, Whereas during non-freshwater discharge.zip file contains data set without a freshwater impacts period.

opencc-by-4.0Sep 2022View details →

zenodo36/100

Effect of Single-Residue Mutations on CTCF Binding to DNA: Insights from Molecular Dynamics Simulations

Supplementary dataset for manuscript "Effect of Single-Residue Mutations on CTCF Binding to DNA: Insights from Molecular Dynamics Simulations".

opencc-by-4.0Mar 2023View details →

Acute and Residual Effects of Caffeinated Beer

ClinicalTrials.gov study NCT00515294. IPD Sharing: NO. Countries: 1. Publications: 1.

Residual Effects of Intoxication on Student Performance

ClinicalTrials.gov study NCT00183170. IPD Sharing: NO. Countries: 1. Publications: 1.

Effect of Methamphetamine on Residual Latent HIV Disease Study

ClinicalTrials.gov study NCT03825536. IPD Sharing: NO. Countries: 1. Publications: 17.

The Study on the Effectiveness of [68Ga]Ga-HBED-CC-DiAsp PET/CT in Calculating GFR and Predicting Residual Renal Function After Partial Nephrectomy

ClinicalTrials.gov study NCT06973798. IPD Sharing: NO. Countries: 1. Publications: 6.

restrictedIPD-UNDECIDEDFeb 2026View details →

Effectiveness of Vitamin Supplementation in Treating People With Residual Symptoms of Schizophrenia

ClinicalTrials.gov study NCT00611806. IPD Sharing: Not stated. Countries: 1. Publications: 1.

The Effect of Electronic Informed Consent Information (EICI) on Residual Newborn Specimen Research

ClinicalTrials.gov study NCT03141307. IPD Sharing: NO. Countries: 1. Publications: 4.

restrictedIPD-UNDECIDEDFeb 2026View details →

Pilot Study Testing the Effect of Ivacaftor on Lung Function in Subjects With Cystic Fibrosis and Residual CFTR Function

ClinicalTrials.gov study NCT01685801. IPD Sharing: Not stated. Countries: 1. Publications: 1.

restrictedIPD-UNDECIDEDFeb 2026View details →

Residual Effect of Chlorhexidine-alcohol Compared to Triclosan-alcohol

ClinicalTrials.gov study NCT01762904. IPD Sharing: Not stated. Countries: 1. Publications: 28.

dryad36/100

Data from: Widespread bird species show idiosyncratic responses in residual body mass to selective logging and edge effects in the Colombian Western Andes

Open the record for dataset details and reuse information.

publicJul 2022View details →

zenodo32/100

Effect of disinfectant residual, pH, and temperature on microbial abundance in disinfected drinking water distribution systems

CSV files and Jupyter notebooks in R reproducing analyses, figures, and tables for "Effect of disinfectant residual, pH, and temperature on microbial abundance in piped drinking water distribution systems"

openother-openAug 2020View details →

zenodo32/100

Influence of visual blur on Tau effect: residual attention resources overflow hypothesis

Data for "Influence of visual blur on Tau effect: residual attention resources overflow hypothesis"

opencc-by-4.0Sep 2023View details →

ClinicalTrials.gov32/100

The Effect of Position Given to Preterms After Feeding on Gastric Residual Volume, Abdominal Oxygenation and Fractional Oxygen Extraction

ClinicalTrials.gov study NCT05888090. IPD Sharing: NO. Countries: 1. Publications: 23.