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4 results for “rstudio”
Cohen AG Hons Thesis Project Dataset and RStudio Codes
<div>The attached codes were written by AG Cohen to analyse the attached data obtained from an experimental taphonomy experiment conducted at the Australian Facility for Taphonomic Experimental Research (AFTER). Six human donors were buried on the left side in flexion. Four donors were buried in a fresh state and two donors were naturally mummified by desiccation prior to burial. The donors were excavated after ~5 to 7 years of burial.</div> <div>The project aimed to explore the correlation between joint flexion and mode of deposition, testing the hypothesis proposed by archaeothanatological scholars that hyperflexion is only achievable in multistage depositions, such as those in which mummification precedes interment, permitting a tighter closure of flexor surfaces than would be achievable in life with the obstruction of soft-tissues.</div> <div> </div> <div>The main aim was to determine if there was any post-burial movement of the lower limbs and a statistically significant difference in flexion angles between the 'mummy' and ‘fresh’ experiment groups. It also provided new insights by comparing the reliability of 2D and 3D methods in measuring joint angles from the skeletal remains and established by what parameters we can define hyperflexion. The data and codes are used to explore this correlation, the agreement between 2D and 3D methods, and the consistency of the measurement methods when performed by one rater (repeats) and multiple beta-testers.</div>
Raw GC-ToF-MS and processed data from individuals sampled in allopatric and contact zones and MZmine 3.9.0 and Rstudio analysis
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Trajectory Analysis: Monocle3 in RStudio - Galaxy Training Material
<p>The input dataset for the trajectory analysis tutorial using Monocle3 in RStudio, which is a follow-up to the case study tutorials that can be found on the <a href="https://training.galaxyproject.org/training-material/topics/single-cell/">Galaxy Training Network</a>.</p>
Multivariate analysis of Pleurodeles waltl injection outcomes using FAMD FactoMineR (RStudio 4.3.2) used to probe sources of variability during an Adeno-associated viral (AAV) screen
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ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.