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45 results for “scientific collections”

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zenodo44/100

Data on scientific production on letramento informacional in Brazil: collection procedures and resulting corpus [Dataset of thesis]

<p>Dataset containing two dataset:</p> <p>1 - Description of the data collection procedures carried out for the thesis: Appropriation of the term letramento by Brazilian Library and Information Science: terminological-conceptual tensions surrounding letramento informacional by Alves (2023).</p> <p>2 - Four Spreadsheet in CSV UTF-8 &nbsp;containing in each of them a set of bibliographic references in partially raw data.</p>

opencc-by-4.0May 2024View details →
zenodo44/100

Inventory of criteria for prioritization of digitisation of collections focussed on scientific and societal needs

<p>Anno 2017 the task of mobilizing data from biocollections ahead of us is still enormous (data of 90% of the biocollections still needs to be mobilized). It is imperative for stakeholders, individual keepers of natural science collections, the community at large, and even for funding agencies, not only to tackle this backlog as quickly as possible, but do it in the best possible order. To establish the best possible order for digitizing biocollections a demand driven framework is required based among others on criteria used to digitize biocollections.</p>

opencc-by-4.0Jul 2018View details →
zenodo40/100

Fig. 1 in Joaquim José da Silva (c. 1755-1810): his life, natural history collecting activities, and involvement in the so-called first scientific expedition in the interior of Angola

Fig. 1. – "Aspecto da embocadura do Rio Dande" [Aspect of the mouth of the River Dande] with Joaquim José da Silva (left) and José António (right). [a. "Forno da cal" [lime oven]; b. "Armazem de a-guardar" [storage]; c. "Sanzallas" [dwellings]; d. "Armazem da madeira" [timber storage]; e. "Igreja que foi dos Jesuitas" [church that was of the Jesuits]; f. "Ponta do Mussule(?)" [Mussule(?) Tip] [SILVA, J.J. (post. 1785: fig. 84); painting executed by José António] [© Arquivo Histórico dos Museus da Universidade de Lisboa]

opencc-by-4.0May 2021View details →
zenodo40/100

Fig. 2 in Joaquim José da Silva (c. 1755-1810): his life, natural history collecting activities, and involvement in the so-called first scientific expedition in the interior of Angola

Fig. 2. – Itinerary of Joaquim José da Silva in Angola from 1783 to 1810 according to TEIXEIRA (1962) in pink, SIMON (1983) in blue, and this work in red.

opencc-by-4.0May 2021View details →
zenodo40/100

Fig. 3 in Joaquim José da Silva (c. 1755-1810): his life, natural history collecting activities, and involvement in the so-called first scientific expedition in the interior of Angola

Fig. 3. – Holotype of Cyphia stheno Webb at P. [Silva s.n., P00088662; © Muséum national d'Histoire naturelle, Paris]

opencc-by-4.0May 2021View details →
zenodo40/100

Fig. 1. Map showing sampling localities during scientific expeditions carried out along the Brazilian continental shelf and slope area from 1999 in New insights gained from museum collections: new deep-sea species of Typhlotanais (Tanaidacea, Typhlotanaidae) from Brazil

Fig. 1. Map showing sampling localities during scientific expeditions carried out along the Brazilian continental shelf and slope area from 1999 to 2016. Abbreviations: ES = Espírito Santo; RJ = Rio de Janeiro.

opencc-by-4.0May 2022View details →
zenodo36/100

Subject metadata in 25 scientific institutional collections

<p>A dataset analysed in&nbsp;<em>&ldquo;Archiving the Leftovers of Science: Metadata and Histories of Scientific Institutions&rdquo; </em>(Digital Culture&nbsp;&amp; Society,&nbsp;Vol. 6(2), 2020, pp. 133-162).&nbsp;It contains&nbsp;a list of scientific institutional collections analysed, their general description, as well as&nbsp;lists of their&nbsp;subject metadata.</p>

opencc-by-4.0Dec 2020View details →
zenodo32/100

FIGURE 1 in An example of the importance of labels and fieldbooks in scientific collections: A freshwater sponge misunderstood for a marine new genus and species

FIGURE 1. Crelloxea spinosa holotype (YPM 9019). A, external morphology. B, transverse section of ectosome and choanosome. C, gemmules. D, oxea. E, acanthoxea. F, acanthostrongyles. G, current label of the holotype of Crelloxea spinosa. Notice the hand-written statement "Field no. 04–46" on the back of the label, just below the inscription "Yale Peabody Museum" at the top right. H, aerial view of Jaboatão dos Guararapes, in Recife metropolitan area, with Olho d'Água Lagoon at the top right.

opennotspecifiedDec 2015View details →
zenodo32/100

Supplementary material 3 from: Hardisty AR, Addink W, Glöckler F, Güntsch A, Islam S, Weiland C (2021) A choice of persistent identifier schemes for the Distributed System of Scientific Collections (DiSSCo). Research Ideas and Outcomes 7: e67379. https://doi.org/10.3897/rio.7.e67379

Comparison of main roles and responsibilities in the two main categories of administration of a Handle-based PID scheme

opencc-zeroJul 2021View details →
zenodo28/100

Scientific journals with discontinued indexing: the SciELO Brazil Collection = Periódicos científicos com indexação descontinuada: a Coleção SciELO Brasil

<p>Analisa os peri&oacute;dicos cient&iacute;ficos com indexa&ccedil;&atilde;o descontinuada da Cole&ccedil;&atilde;o SciELO Brasil. O <em>corpus</em> constituiu-se de 75 peri&oacute;dicos com indexa&ccedil;&atilde;o descontinuada (cole&ccedil;&atilde;o n&atilde;o-corrente) desta base. Foram analisados dados dos peri&oacute;dicos e seus editoriais, utilizando-se a t&eacute;cnica de an&aacute;lise de conte&uacute;do. A base registra duas categorias de motivos gen&eacute;ricas: Terminado (40 t&iacute;tulos): tiveram seus t&iacute;tulos alterados, mas permaneceram na base, em sua maioria; e Indexa&ccedil;&atilde;o interrompida (35 t&iacute;tulos): sa&iacute;ram da base, por&eacute;m os volumes j&aacute; indexados foram mantidos.&nbsp; Dentre os t&iacute;tulos da categoria Terminado, identificaram-se cinco motiva&ccedil;&otilde;es principais: internacionaliza&ccedil;&atilde;o e visibilidade internacional (25 t&iacute;tulos), moderniza&ccedil;&atilde;o (2), mudan&ccedil;a de entidade editora (2), mudan&ccedil;a de entidade editora e internacionaliza&ccedil;&atilde;o (1), absorvido por outro peri&oacute;dico (1), motiva&ccedil;&otilde;es n&atilde;o identificadas (9).&nbsp; Dentre os t&iacute;tulos da categoria Indexa&ccedil;&atilde;o interrompida, identificaram-se tr&ecirc;s principais motiva&ccedil;&otilde;es: internacionaliza&ccedil;&atilde;o e visibilidade internacional, parceria com editora comercial internacional &nbsp;(12 t&iacute;tulos), atraso no lan&ccedil;amento de novos fasc&iacute;culos (5), contra a pol&iacute;tica da SciELO de internacionaliza&ccedil;&atilde;o (1), motiva&ccedil;&otilde;es n&atilde;o identificadas (17). Constatou-se que a sa&iacute;da da SciELO coincide com mudan&ccedil;as importantes nas trajet&oacute;rias da maioria dos peri&oacute;dicos. As mudan&ccedil;as evidenciam capacidade de acompanhar o aumento de exig&ecirc;ncias tecnol&oacute;gicas e editoriais propostas pela base para manter os padr&otilde;es de qualidade internacionais da publica&ccedil;&atilde;o cient&iacute;fica. A SciELO &eacute; uma importante catalisadora desse processo, e as institui&ccedil;&otilde;es editoras t&ecirc;m papel fundamental na sustentabilidade. No total, 12 t&iacute;tulos tiveram a indexa&ccedil;&atilde;o descontinuada porque estabeleceram parcerias com editoras comerciais internacionais, abandonando o acesso aberto, fen&ocirc;meno que merece aten&ccedil;&atilde;o.</p>

opencc-by-4.0Feb 2020View details →
zenodo28/100

Figure 1d from: Owen D, Livermore L, Groom Q, Hardisty A, Leegwater T, van Walsum M, Wijkamp N, Spasić I (2020) Towards a scientific workflow featuring Natural Language Processing for the digitisation of natural history collections. Research Ideas and Outcomes 6: e55789. https://doi.org/10.3897/rio.6.e55789

Figure 1d A range of sample specimens that demonstrate the wide taxonomic range of specimens encountered in collections. They also demonstrate the diversity of label types, which include handwritten, typed, and printed labels. Note the presence of various barcodes, rulers, and a colour chart in addition to labels describing the origin of the specimen and its identity. - Fossilised animal skin (Natural History Museum 2009)

opencc-by-4.0Jul 2020View details →
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Figure 1b from: Owen D, Livermore L, Groom Q, Hardisty A, Leegwater T, van Walsum M, Wijkamp N, Spasić I (2020) Towards a scientific workflow featuring Natural Language Processing for the digitisation of natural history collections. Research Ideas and Outcomes 6: e55789. https://doi.org/10.3897/rio.6.e55789

Figure 1b A range of sample specimens that demonstrate the wide taxonomic range of specimens encountered in collections. They also demonstrate the diversity of label types, which include handwritten, typed, and printed labels. Note the presence of various barcodes, rulers, and a colour chart in addition to labels describing the origin of the specimen and its identity. - Pinned insect specimen (Natural History Museum 2018)

opencc-by-4.0Jul 2020View details →
zenodo28/100

Figure 1c from: Owen D, Livermore L, Groom Q, Hardisty A, Leegwater T, van Walsum M, Wijkamp N, Spasić I (2020) Towards a scientific workflow featuring Natural Language Processing for the digitisation of natural history collections. Research Ideas and Outcomes 6: e55789. https://doi.org/10.3897/rio.6.e55789

Figure 1c A range of sample specimens that demonstrate the wide taxonomic range of specimens encountered in collections. They also demonstrate the diversity of label types, which include handwritten, typed, and printed labels. Note the presence of various barcodes, rulers, and a colour chart in addition to labels describing the origin of the specimen and its identity. - Microscope slide (Natural History Museum 2017)

opencc-by-4.0Jul 2020View details →
zenodo28/100

Figure 1a from: Owen D, Livermore L, Groom Q, Hardisty A, Leegwater T, van Walsum M, Wijkamp N, Spasić I (2020) Towards a scientific workflow featuring Natural Language Processing for the digitisation of natural history collections. Research Ideas and Outcomes 6: e55789. https://doi.org/10.3897/rio.6.e55789

Figure 1a A range of sample specimens that demonstrate the wide taxonomic range of specimens encountered in collections. They also demonstrate the diversity of label types, which include handwritten, typed, and printed labels. Note the presence of various barcodes, rulers, and a colour chart in addition to labels describing the origin of the specimen and its identity. - Herbarium specimen (Natural History Museum 2007a)

opencc-by-4.0Jul 2020View details →
zenodo28/100

Figure 11 from: Owen D, Livermore L, Groom Q, Hardisty A, Leegwater T, van Walsum M, Wijkamp N, Spasić I (2020) Towards a scientific workflow featuring Natural Language Processing for the digitisation of natural history collections. Research Ideas and Outcomes 6: e55789. https://doi.org/10.3897/rio.6.e55789

Figure 11 The distribution of languages across the specimen and herbaria. EN=English, FR=French, LA=Latin, ET=Estonian, DE=German, NL=Dutch, PT=Portuguese, ES=Spanish, SV=Swedish, RU=Russian, FI=Finnish, IT=Italian, ZZ=Unknown. The codes for the contributing herbaria are listed in Table 11 (from Dillen et al. 2019).

opencc-by-4.0Jul 2020View details →
zenodo28/100

Supplementary material 1 from: Owen D, Livermore L, Groom Q, Hardisty A, Leegwater T, van Walsum M, Wijkamp N, Spasić I (2020) Towards a scientific workflow featuring Natural Language Processing for the digitisation of natural history collections. Research Ideas and Outcomes 6: e55789. https://doi.org/10.3897/rio.6.e55789

Appendices

opencc-zeroJul 2020View details →
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Figure 1e from: Owen D, Livermore L, Groom Q, Hardisty A, Leegwater T, van Walsum M, Wijkamp N, Spasić I (2020) Towards a scientific workflow featuring Natural Language Processing for the digitisation of natural history collections. Research Ideas and Outcomes 6: e55789. https://doi.org/10.3897/rio.6.e55789

Figure 1e A range of sample specimens that demonstrate the wide taxonomic range of specimens encountered in collections. They also demonstrate the diversity of label types, which include handwritten, typed, and printed labels. Note the presence of various barcodes, rulers, and a colour chart in addition to labels describing the origin of the specimen and its identity. - Liquid preserved specimen (Natural History Museum 2010)

opencc-by-4.0Jul 2020View details →
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Figure 2 from: Owen D, Groom Q, Hardisty A, Leegwater T, Livermore L, van Walsum M, Wijkamp N, Spasić I (2020) Towards a scientific workflow featuring Natural Language Processing for the digitisation of natural history collections. Research Ideas and Outcomes 6: e58030. https://doi.org/10.3897/rio.6.e58030

Figure 2 A possible semi-automatic digitisation workflow to extract data from the labels of collection specimens.

opencc-by-4.0Sep 2020View details →
zenodo28/100

Figure 2 from: Raes N, Casino A, Goodson H, Islam S, Koureas D, Schiller EK, Schulman L, Tilley L, Robertson T (2020) White paper on the alignment and interoperability between the Distributed System of Scientific Collections (DiSSCo) and EU infrastructures - The case of the European Environment Agency (EEA). Research Ideas and Outcomes 6: e62361. https://doi.org/10.3897/rio.6.e62361

Figure 2 The current and required implementation readiness levels for DiSSCo to enter the construction phase of the DiSSCo RI. The grey arrows indicate the tasks for the DiSSCo Prepare project.

opencc-by-4.0Jan 2021View details →
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Figure 3 from: Raes N, Casino A, Goodson H, Islam S, Koureas D, Schiller EK, Schulman L, Tilley L, Robertson T (2020) White paper on the alignment and interoperability between the Distributed System of Scientific Collections (DiSSCo) and EU infrastructures - The case of the European Environment Agency (EEA). Research Ideas and Outcomes 6: e62361. https://doi.org/10.3897/rio.6.e62361

Figure 3 An example of a simple Digital Specimen (Hardisty 2020). Arrows point to identifiers of linked information that was derived from or is related to the physical specimen it represents. dissco.tech blog post.

opencc-by-4.0Jan 2021View details →

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

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abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record