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zenodo32/100

Experimental Data for "What Makes a Top-Performing Precision Medicine Search Engine? Tracing Main System Features in a Systematic Way" at SIGIR2020

<p>This deposit contains data used for the experiments reported in the paper &quot;<a href="https://doi.org/10.1145/3397271.3401048">What Makes a Top-Performing Precision Medicine Search Engine? Tracing Main System Features in a Systematic Way</a>&quot;, most notably the ElasticSearch 5.4 indices used for the reported experiments.</p> <p>To load the indices into an ElasticSearch cluster of your own, use the restore function described in the <a href="https://www.elastic.co/guide/en/elasticsearch/reference/5.4/modules-snapshots.html">ElasticSearch documentation</a>.</p> <p>The names of the index snapshots contained here are</p> <ul> <li>ct1718 for the indexed ClinicalTrials data used in the TREC-PM challenges in <a href="http://www.trec-cds.org/2017.html">2017</a> and <a href="http://www.trec-cds.org/2018.html">2018</a>.</li> <li>ct19 for the indexed ClinicalTrials data used in the TREC-PM challenge in <a href="http://www.trec-cds.org/2019.html">2019</a>.</li> <li>ba1718 for the indexed PubMed data used in the TREC-PM challenges in <a href="http://www.trec-cds.org/2017.html">2017</a> and <a href="http://www.trec-cds.org/2018.html">2018</a>.</li> <li>ba19 for the indexed PubMed data used in the TREC-PM challenge in <a href="http://www.trec-cds.org/2019.html">2019</a>.</li> </ul> <p>The other file contains the original output that <a href="https://www.automl.org/automated-algorithm-design/algorithm-configuration/smac/">SMAC</a> wrote to disc during the parameter optimization process. There are directories for the biomedical abstracts (BA) and clinical trials (ct) and for each respective 10 fold cross validation split. Those file contain the exact parameter configurations and their evalation score (the infNDCG metric was used) in live-runXX.json files.</p> <p>The code to these files is located in <a href="https://zenodo.org/record/3856403">this Zenodo deposit</a>.</p>

opencc-by-4.0May 2020View details →
zenodo28/100

Search Engines Comparison and Websites Performance

<p>The current dataset is consisted of 200 search results extracted from Google and Bing engines (100 of Google and 100 of Bing). The search terms are selected from the 10 most search keywords of 2021 based on the provided data of Google Trends. The rest of the sheets include the performance of the websites according to three technical evaluation aspects. That is, SEO, Speed and Security. The performance dataset has been developed through the utilization of CheckBot crawling tool. The whole dataset can help information retrieval scientists to compare the two engines in terms of their position/ranking and their performance related to these factors.</p> <p>For more information about the thinking of the of the structure of the dataset please contact the Information Management Lab of University of West Attica.</p> <p>Contact Persons: Vasilis Ntararas (lb17032@uniwa.gr) , Georgios Ntimo (<a href="mailto:lb17100@uniwa.gr">l</a>b17100@uniwa.gr) and Ioannis C. Drivas (idrivas@uniwa.gr)</p>

opencc-by-4.0Jun 2023View details →

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Allen Brain Atlas

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behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
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DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record