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21 results for “seed zone”
RIV07 Seeding rates woody removal of a tallgrass prairie stream and riparian zone after a decade of woody vegetation removal
In fall of 2010 in watershed N2B ( 39.088976°, -96.588599°), we established plant community plots to assess the potential ability of the riparian zone to shift to a grassland state based on cutting alone and cutting with replanting. The three treatments were 1) naturally open riparian grassland before the removal, 2) areas cleared of woody vegetation, and 3) areas cleared of woody vegetation and seeded with prairie plant species. The addition of the seeded treatment was designed to address if recovery of grassland vegetation is hindered by propagule limitation. The seeded and non-seeded removal plots were adjacent to each other and randomly assigned. In each community type, there were four plots, each of which was 10 m parallel along and 3 m perpendicular to the stream channel. Each plot had four plant composition transects along which we sampled four one m2 subplots along each transect. Vegetative cover of vascular plant species was determined using a modified Daubenmire scale (Gibson and Hulbert 1987).
Climate based seed zones for Mexico: spatial grids to guide reforestation under observed and projected climate change
<p>This database entry provides climate-based seed zone system for Mexico to address climate change observed over the last 30 years and projected climate change for the 2050s. The database corresponds to a journal publication by Castellanos-Acuña et al. (2018), available at https://doi.org/10.1007/s11056-017-9620-6. This seed zone classification is based on bands of two climate variables that have often been shown to drive genetic adaptation of tree species: mean coldest month temperature (MCMT), and an aridity index (AHM). MCMT was divided into ten bands of 3°C intervals, with the limits of these bands being, temperatures below <2°C, 2-5°, 5-8°, 8-11°, 11-14°, 14-17°, 17-20°, 20-23°, 23-26°, >26°C. AHM was divided into seven bands with intervals that are approximately equal width under a log-transformation: <20, 20-30, 30-45, 45-65, 65-95, 95-140, and >140 °C/mm. The gridded files provided in this database entry, the classes are coded as integer numbers, with the last digit representing the AHM class (1-7) and the first or first and second digit representing the MCMT class (1-10).</p>
Fine-scale spatial genetic structure in a locally abundant native bunchgrass (Achnatherum thurberianum) including distinct lineages revealed within seed transfer zones
<p>Analyses of the factors shaping genetic variation in widespread plant species are important for understanding evolutionary history and local adaptation and have applied significance for guiding conservation and restoration decisions. Thurber's needlegrass (<em>Achnatherum</em> <em>thurberianum</em>) is a widespread, locally abundant grass that inhabits heterogeneous arid environments of western North America and is of restoration significance. It is a common component of shrubland steppe communities in the Great Basin Desert, where drought, fire, and invasive grasses have degraded natural communities. Using a reduced representation sequencing approach, we generated SNP data at 5,677 loci across 246 individuals from 17 <em>A. thurberianum</em> populations spanning five previously delineated seed zones from the western Great Basin. Analyses revealed pronounced population genetic structure, with individuals forming consistent geographical clusters across a variety of population genetic analyses and spatial scales. Low levels of genetic diversity within populations, as well as high population estimates of linkage disequilibrium and relatedness, were consistent with self-fertilization as a contributor to population differentiation. Variance partitioning and partial redundancy analysis (pRDA) indicated local adaptation to environment as additionally influencing the spatial distribution of genetic variation. The environmental variables driving these results were similar to those implicated in recent genecological work which inferred local adaptation for seed zone delineation. Our analyses also revealed a complex evolutionary history of <em>A. thurberianum</em> in the Great Basin, where previously delineated seed zones contain distantly related populations. Our results indicate evolutionary history, mating system, and differentiation across distinct geographic and environmental scales have shaped genetic variation in <em>A. thurberianum</em> and illustrate how numerous aspects of population genetic variation might require consideration for restoration planning.</p>
Comparative histology of abscission zones reveals the extent of convergence and divergence in seed shattering in weedy and cultivated rice
<p>The modification of seed shattering has been a recurring theme in rice evolution. The wild ancestor of cultivated rice disperses its seeds, but reduced shattering was selected during multiple domestication events to facilitate harvesting. Conversely, selection for increased shattering occurred during the evolution of weedy rice, a weed invading cultivated rice fields that has originated multiple times from domesticated ancestors. Shattering requires formation of a tissue known as the abscission zone (AZ), but how the AZ has been modified throughout rice evolution is unclear. We quantitatively characterized the AZ characteristics of relative length, discontinuity, and intensity in 86 cultivated and weedy rice accessions. We reconstructed AZ evolutionary trajectories and determined the degree of convergence among different cultivated varieties and among independent weedy rice populations. AZ relative length emerged as the feature best distinguishing high and low shattering rice. Cultivated varieties differed in average AZ morphology, revealing lack of convergence in how shattering reduction was achieved during domestication. In contrast, weedy rice populations typically converged on complete AZs, irrespective of origin. By examining AZ population-level morphology, our study reveals its evolutionary plasticity, and suggests that the genetic potential to modify the ecologically and agronomically important trait of shattering is plentiful in rice lineages.</p>
Comparative histology of abscission zones reveals the extent of convergence and divergence in seed shattering in weedy and cultivated rice
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Fine-scale spatial genetic structure in a locally abundant native bunchgrass (Achnatherum thurberianum) including distinct lineages revealed within seed transfer zones
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Contact zone of two different chloroplast lineages and genetic guidelines for seed transfer in Quercus serrata and Q. crispula
<p>Within their natural distribution ranges, plant species exhibit genetic structure which has been created by global climate change and natural selection over long periods. To conserve local forests with different genetic structures, genetic guidelines for seed and seedling transfer in individual species are therefore necessary. Genetic guidelines have been published for 43 Japanese tree species using population genetic data; however, for practical use, more detailed genetic borders between important genetic lineages should be clarified to inform seed collection and planting. Thus, we investigated in detail the genetic borders between two important Japanese oak species, Quercus serrata and Q. crispula, in the Chubu region of Japan using chloroplast and nuclear DNA markers, and we discuss the factors that influenced border creation using the results of species distribution modelling (SDM). Two distinct cpDNA haplotypes were found for each species (northern and southern haplotype) within the Chubu region of Japan but the difference in nuclear DNA between northern and southern haplotype populations was very small both in Q. serrata and Q. crispula. The results of SDM showed that during the LGM Q. serrata was distributed mostly along the coastline but Q. crispula was distributed not only along the coast but also in mountainous areas further inland. The cpDNA genetic borders of these two oak species are complex and seem to have been influenced by topography and their distribution during the LGM. We propose and discuss genetic guidelines for these two oak species based on the results of this study.</p>
Assisted migration across fixed seed zones detects adaptation lags in two major North American tree species
<p>Boreal forests are experiencing dramatic climate change, having warmed 1-1.9°C over the last century. Yet forest regeneration practices are often still dictated by a fixed seed zone framework, in which seeds are both harvested from and planted into predefined areas. Our goal was to determine whether seedlings sourced from southern seed zones in Minnesota USA are already better adapted to northerly seed zones because of climate change. Bur oak (Quercus macrocarpa) and northern red oak (Quercus rubra) seedlings from two seed zones (i.e. tree ecotypes) were planted into 16 sites in two northern seed zones and measured for three years. Our hypotheses were threefold: 1) tree species with more southern geographic distributions would thrive in northern forests where climate has already warmed substantially, 2) southern ecotypes of these species would have higher survival and growth than the northern ecotype in northern environments, and 3) natural selection would favor seedlings that expressed phenotypic and phenological traits characteristic of trees sourced from the more southern seed zone. For both species, survival was high (>93%), and southern ecotypes expressed traits consistent with our climate adaptation hypotheses. Ecotypic differences were especially evident for red oak; the southern ecotype had had higher survival, lower SLA, faster height and diameter growth, and extended leaf phenology relative to the northern ecotype. Bur oak results were weaker, but the southern ecotype also had earlier budburst and lower SLA than the northern ecotype. Models based on the fixed seed zones failed to explain seedling performance as well as those with continuous predictors (e.g. climate and geographical position), suggesting that plant adaptations within current seed zone delineations do align with changing climate conditions. Adding support for this conclusion, natural selection favored traits expressed by the more southern tree ecotypes. Collectively, these results suggest that state seed sourcing guidelines should be reexamined to permit plantings across seed zones, a form of assisted migration. More extensive experiments (i.e. provenance trails) are necessary to make species-specific seed transfer guidelines that account for climate trends while also considering the precise geographic origin of seed sources.</p>
Data from: Genetic differentiation within multiple common grassland plants supports seed transfer zones for ecological restoration
Ecological restoration of grasslands is increasingly based on regional seeds derived from predefined seed transfer zones. However, the degree and spatial pattern of genetic differentiation among provenances of different seed transfer zones is largely unknown. We assessed the genetic differentiation among eight out of 22 German seed transfer zones for seven common grassland species (Arrhenatherum elatius, Centaurea jacea, Daucus carota, Galium album, Hypochaeris radicata, Knautia arvensis and Lychnis flos-cuculi) using AFLP markers. We analysed genetic population structure with AMOVA and Bayesian cluster analysis and tested for isolation by distance and isolation by environment. In all of the investigated species, almost all pairs of provenances were genetically differentiated. Bayesian cluster analysis revealed species-specific numbers and spatial patterns of gene pools, with between two (Arrhenatherum) and eight clusters (Lychnis). Most investigated seed transfer zones represented a unique gene pool in the majority of the species. We found isolation by distance in four species, isolation by environment, driven by climatic seasonality, in three species, and a lack of both in three species. Thus, the observed genetic differentiation appears to be caused by both neutral and adaptive processes. Synthesis and applications. Our study shows that grassland plants are indeed strongly genetically differentiated across Germany supporting the strategy of seed transfer zones for ecological restoration. Although the predefined seed transfer zones are unlikely to match the exact genetic structure of many species, they serve their purpose by capturing a substantial amount of intraspecific genetic variation across species.
FIGURE. Floral habit and structure of C. spongifolia. A. Type specimen in situ with open, spathe limb (apex is reflexed out of view), and green spathe tube (ca. 6 cm long). B. Adjacent plant with inflorescences and prophylls. C. Spadix showing from top: sterile appendix, staminate (male) zone, sterile interstice, and green pistillate (female) zone with tapered, conical form. D. Detail of female zone showing a few basal staminodes. E–G. Berries of the preserved type specimen. G. Dissected berry with orthotropous ovules (some outlined) attached by funicles to parietal placentae (arrows). H. Surface of male zone showing closely-packed synandria. I. Synandria separated to show fused anther sacs beneath apical pores (example in center has 8 pores, 8 anthers) J. Mature fruiting head, with single berry removed to show seed packing and 67 seeds extracted (scale bar units: 1 mm) (Bach Ma NP; type 2020; fruit and seeds 2018). Photos: NVD and PJM. in Colocasia spongifolia sp. nov. (Araceae) in southern China and central Vietnam
FIGURE. Floral habit and structure of C. spongifolia. A. Type specimen in situ with open, spathe limb (apex is reflexed out of view), and green spathe tube (ca. 6 cm long). B. Adjacent plant with inflorescences and prophylls. C. Spadix showing from top: sterile appendix, staminate (male) zone, sterile interstice, and green pistillate (female) zone with tapered, conical form. D. Detail of female zone showing a few basal staminodes. E–G. Berries of the preserved type specimen. G. Dissected berry with orthotropous ovules (some outlined) attached by funicles to parietal placentae (arrows). H. Surface of male zone showing closely-packed synandria. I. Synandria separated to show fused anther sacs beneath apical pores (example in center has 8 pores, 8 anthers) J. Mature fruiting head, with single berry removed to show seed packing and 67 seeds extracted (scale bar units: 1 mm) (Bach Ma NP; type 2020; fruit and seeds 2018). Photos: NVD and PJM.
Species and plot characteristics for River restoration effects on dispersal and the development of riparian seed bank: Do poor seed banks limit restoration of boreal riparian zones?
<p>Vegetation composition in boreal streams in the standing vegetation and the seed bank, </p>
Contact zone of two different chloroplast lineages and genetic guidelines for seed transfer in Quercus serrata and Q. crispula
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Data from: What's the meaning of local? Using molecular markers to define seed transfer zones for ecological restoration in Norway
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Data from: Genetic differentiation within multiple common grassland plants supports seed transfer zones for ecological restoration
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Data from: Genetic variation in adaptive traits and seed transfer zones for Pseudoroegneria spicata (bluebunch wheatgrass) in the northwestern United States
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Assisted migration across fixed seed zones detects adaptation lags in two major North American tree species
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Data from: Seed priming and Zaï pit practice improve field performance of sorghum (Sorghum bicolor L. Moench) in the Sahelian zone of Mali
Poor seed germination caused by a variety of seed, soil and environmental factors lead to suboptimal seedling stand and ultimately yield suffers a serious setback. A number of priming techniques have been found to be effective in increasing germination and seedling growth and development. This includes techniques such as on-farm hydro-priming (seed soaking in well water) and osmo-priming (seed soaking in low osmotic solutions of Potassium silicate). Also, Zaï practice, a cropping system concentrating runoff water and manure in pits, may be a simple solution in addition to seed priming techniques for crop establishment under early drought and heat prone areas and for increased productivity of poor soils. This study aims to evaluate the combined effect of priming and cultural practices (ridge and zaï pits) on three sorghum varieties in the Sahelian zone of Mali. Data were collected during two growing seasons in 2014 and 2015. Monitored parameters were assessed by comparing the impact of priming with untreated sorghum seeds (the control) cultivated on ridges and zaï pits with or without compost. We also compared the effect of hydro-priming in water from well to osmo-priming using K2SiO3 performance. Hence, each of the 3 sorghum variety seeds were subjected to 3 different priming, sowed on ridges and zaï treatments. Variety banidoka and CSM63E recorded the maximum GP (54.0%) which was significantly higher than saba-tienda GP (48%). The priming treatments were not statistically different for germination but showed slight improvement in GP for primed (54%) compared to unprimed (48%). Germination percentages were significantly higher in zaï pits practice without (55%) and with compost (55%) compared to ridges (48%). Grain yield varied significantly among sorghum varieties (p<0. 04) and cultural practices (p<0. 01). There was no significant difference among priming treatments for grain yield. However, variety banidoka produced the highest grain yield (961 kg ha-1) followed by CSM63E (874 kg ha-1) and lastly saba-tienda (671 kg ha-1) with banidoka showing statistically different yield compared to saba-tienda. Zaï pits practice with compost obtained the highest GY (1131 kg ha-1), which was statistically different from the GY of zaï pits practice without compost (695 kg ha-1) and ridge practice (742 kg ha-1). Zaï pits practice without compost did not statistically differ from ridge practice. The findings showed that seed priming in addition to zaï pits practice improves seed germination and seedling development of sorghum probably by accelerating imbibition and providing continuous moisture during the germination phase. Combining seed priming and zai pit practice with compost appears a simple practice that will improve crop establishment and grain yield in the Sahelian zone of West Africa.
Data from: Seed priming and Zaï pit practice improve field performance of sorghum (Sorghum bicolor L. Moench) in the Sahelian zone of Mali
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Data from: Species richness and phylogenetic diversity of seed plants across vegetation zones of Mount Kenya, East Africa
Mount Kenya is of ecological importance in tropical east Africa due to the dramatic gradient in vegetation types that can be observed from low to high elevation zones. However, species richness and phylogenetic diversity of this mountain have not been well studied. Here, we surveyed distribution patterns for a total of 1,335 seed plants of this mountain and calculated species richness and phylogenetic diversity across seven vegetation zones. We also measured phylogenetic structure using the net relatedness index (NRI) and the nearest species index (NTI). Our results show that lower montane wet forest has the highest level of species richness, density, and phylogenetic diversity of woody plants, while lower montane dry forest has the highest level of species richness, density, and phylogenetic diversity in herbaceous plants. In total plants, NRI and NTI of four forest zones were smaller than three alpine zones. In woody plants, lower montane wet forest and upper montane forest have overdispersed phylogenetic structures. In herbaceous plants, NRI of Afro‐alpine zone and nival zone are smaller than those of bamboo zone, upper montane forest, and heath zone. We suggest that compared to open dry forest, humid forest has fewer herbaceous plants because of the closed canopy of woody plants. Woody plants may have climate‐dominated niches, whereas herbaceous plants may have edaphic and microhabitat‐dominated niches. We also proposed lower and upper montane forests with high species richness or overdispersed phylogenetic structures as the priority areas in conservation of Mount Kenya and other high mountains in the Eastern Afro‐montane biodiversity hotspot regions.
Data from: Species richness and phylogenetic diversity of seed plants across vegetation zones of Mount Kenya, East Africa
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