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7 results for “serinus canaria”
Labeled songs of domestic canary M1-2016-spring (Serinus canaria)
<p><strong>Labeled songs of domestic canary M1-2016-spring (Serinus canaria)</strong></p> <p><em>J. Giraudon*<sup>123</sup>, N. Trouvain*<sup>123</sup>, A. Cazala<sup>4</sup>, C. Del Negro<sup>4</sup>, X. Hinaut<sup>123</sup></em></p> <p><sup>1</sup> Inria Bordeaux Sud-Ouest, France</p> <p><sup>2</sup> LaBRI, Bordeaux INP, CNRS, UMR 5800, France</p> <p><sup>3</sup> Institut des Maladies Neurogégénératives, Université de Bordeaux, CNRS, UMR 5293, France</p> <p><sup>4 </sup>Paris-Saclay University, UMR 9197 CNRS, Paris-Saclay Institute of Neuroscience, France </p> <p><em>* these authors participated equally to this work.</em></p> <p><strong>General information</strong></p> <p>This dataset contains ~3h of labeled songs (459 songs) of one male canary (called M1) recorded between May 24th and June 15th 2016. Songs were recorded in a sound-isolation chamber using a RODE M3 microphone, an external sound card for microphone amplification (M-Audio Fast Track Ultra 8R), and the software Sound Analysis Pro 2011 (SAP). SAP parameters were set with conservative thresholds (software threshold to 4-6) in order to record the initiation of canary's songs which can be low in volume.</p> <p>Songs were hand labelled by one human expert using Audacity. They were then checked and corrected by another human expert assisted by an automated program based on recurrent neural networks (see References).</p> <p><strong>Dataset description</strong></p> <p>Canary songs are labeled using 27 different identified syllable classes + 1 "call" class identifying simple off-song calls + 1 "TRASH" class for irrelevant sounds (very rare vocalizations or non-bird sounds) + 1 "SIL" class for silence between vocalizations. Songs are annotated at the phrase level: a phrase consists of a repetition of a single syllable type and each phrase type is assigned a label.</p> <p>Annotations are provided in CSV format in the "M1-2016-spring_csv_annotations.zip" archive. There is one file per song, containing:</p> <ul> <li>a "wave" column indicating the song's audio filename;</li> <li>"start" and "end" columns indicating the temporal delimitation of the label from the begining of the song, in seconds;</li> <li>a "syll" column indicating the labels.</li> </ul> <p>Annotations are also provided in <a href="https://manual.audacityteam.org/man/importing_and_exporting_labels.html">Audacity TXT format</a> in the "M1-2016-spring_audacity_annotations.zip" archive. There is one file per song, containing three tabulation-separated columns. The first two column indicates the temporal delimitation (start and end) of the phrase from the begining of the song. The thrid one contains the associated label. Annotations filenames match corresponding song audio filename.</p> <p>Songs are provided in WAV format (44kHz sampling rate) in the "M1-2016-spring_audio.zip" archive. There is one file per song: audio filenames match corresponding annotation filenames.</p> <p><strong>References</strong></p> <p>This dataset was used in:</p> <p>N. Trouvain, X. Hinaut (2021) Canary Song Decoder: Transduction and Implicit Segmentation with ESNs and LTSMs. HAL preprint <a href="https://hal.inria.fr/hal-03203374">⟨hal-03203374⟩</a></p>
Fig. 2 in The canary Serinus canaria (Passeriformes: Fringillidae) as a new host for Isospora bioccai in Mexico
Fig. 2. Isospora bioccai from the duodenum of a canary Serinus canaria. Meronts (arrowheads) surrounded by its parasitophorous vacuole. Scale-bar: 10μm.
Fig. 1 in The canary Serinus canaria (Passeriformes: Fringillidae) as a new host for Isospora bioccai in Mexico
Fig. 1. Oöcyst of Isospora bioccai. A & B. Photomicrographs. Scale-bar: 10μm. ∗ Corresponding author. CIESA-FMVZ-UAEM, Carretera Toluca-Atlacomulco km 12, Toluca, 50200, Mexico. E-mail address: soriano@uaemex.mx (E. Soriano-Vargas).
Fig. 3 in The canary Serinus canaria (Passeriformes: Fringillidae) as a new host for Isospora bioccai in Mexico
Fig. 3. Duodenum histological sections of a naturally Isospora bioccai-infected canary Serinus canaria. A. Meronts surrounded by its parasitophorous vacuole. B. A sexual stage. Photomicrographs. Scale-bar: 10μm.
Data from: Hatching asynchrony aggravates inbreeding depression in a songbird (Serinus canaria): an inbreeding-environment interaction
Understanding how the intensity of inbreeding depression is influenced by stressful environmental conditions is an important area of enquiry in various fields of biology. In birds, environmental stress during early development is often related to hatching asynchrony; differences in age, and thus size, impose a gradient in conditions ranging from benign (first hatched chick) to harsh (last hatched chick). Here, we compared the effect of hatching order on growth rate in inbred (parents are full siblings) and outbred (parents are unrelated) canary chicks (Serinus canaria). We found that inbreeding depression was more severe under more stressful conditions, being most evident in later hatched chicks. Thus, consideration of inbreeding-environment interactions is of vital importance for our understanding of the biological significance of inbreeding depression and hatching asynchrony. The latter is particularly relevant given that hatching asynchrony is a widespread phenomenon, occurring in many bird species. The exact causes of the observed inbreeding-environment interaction are as yet unknown, but may be related to a decrease in maternal investment in egg contents with laying position (i.e. pre-hatching environment), or to performance of the chicks during sibling competition and/or their resilience to food shortage (i.e. post-hatching environment).
Data from: Hatching asynchrony aggravates inbreeding depression in a songbird (Serinus canaria): an inbreeding-environment interaction
Open the record for dataset details and reuse information.
Expression data from Serinus canaria HVC, RA and Entopallium
GEO Series GSE50070. Serinus canaria; Taeniopygia guttata. 66 samples. Type: Expression profiling by array.
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