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datasets available to search
ShareScore release 0.9.0
Dataset results
5 results for “shotgun proteomics”
MSFragger open searches of proteome shotgun and phosphoproteomic runs PXD013868 (Mergner et al., 2020)
<p>MSFragger open searches of phosphoproteomics and shotgun proteome runs of large-scale tissue atlas in Arabidopis (Mergner et al., 2020). Part of the Plant PTM Viewer 2.0 update paper.</p>
Video Presentation of Sample Preparation by Easy Extraction and Digestion (SPEED) of Mouse Liver Tissue for Shotgun Proteomics
<p><em>Sample Preparation by Easy Extraction and Digestion</em> (<strong>SPEED</strong>) is a universal method for peptide generation from various sources. Due to its detergent-free chemistry, SPEED offers some inherent benefits for bottom-up proteomics sample preparation, including improved quantitative reproducibility, simple applicability and enhanced proteome coverage for lysis-resistant sample types as well as very rapid sample processing. The video shows the preparation of mouse liver tissue using the basic SPEED protocol for crude lysate injection into a nLC-MS/MS instrument</p>
Directed shotgun proteomics guided by RNA-Seq identifies a complete expressed prokaryotic proteome
GEO Series GSE44564. Bartonella henselae. 4 samples. Type: Expression profiling by high throughput sequencing.
UTS Proteomics subject 2019 coli shotgun dataset
<p>Staff generated dataset for Proteomics subject in 2019.</p>
Pulldown shotgun proteomics Arabidopsis STOP1
<p>Pulldown shotgun proteomics Arabidopsis STOP1</p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.