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ShareScore release 0.9.0
Dataset results
91 results for “single-nucleus RNA sequencing”
Single-cell and single-nucleus RNA-sequencing from paired normal-adenocarcinoma lung samples provides both common and discordant biological insights
<p>The datasets generated by <em>Cellranger </em>for all 24 samples (.h5 format).<br><br></p>
single-nucleus RNA sequencing data from female Aedes aegypti maxillary palp
<p>Single-nucleus RNA sequencing data accompanying Herre*, Goldman* et al. (2022), "Non-Canonical Odor Coding in the Mosquito" (https://doi.org/10.1016/j.cell.2022.07.024)</p> <p>For further analysis see: https://github.com/VosshallLab/Younger_Herre_Vosshall2020/tree/main/snRNAseq_SupplementaryData</p> <p>For raw sequencing files see NCBI BioProject: PRJNA794050</p>
Exploring cell diversity and fidelity in crustacean limb regeneration using single-nucleus RNA sequencing
<p>R objects containing datasets generated by snRNA-seq on Parhyale hawaiensis limbs. These datasets have been generated during my Phd thesis.</p>
single-nucleus RNA sequencing data of Minimal Change Disease and Focal Segmental Glomerulosclerosis patients
<p>single-nucleus RNA sequencing data of Minimal Change Disease and Focal Segmental Glomerulosclerosis patients</p>
Single-nucleus RNA-sequencing reveals oligodendrocytes and their progenitors as vulnerable cell types in prefrontal cortex and anterior cingulate of brains with Parkinson's disease
<p>Several prior studies have proposed the involvement of various brain regions and cell types in Parkinson's disease (PD) pathology. Here, we performed snRNA-seq on the prefrontal cortex and anterior cingulate regions from post-mortem control and PD brain tissue. We found a dramatic association of oligodendrocytes and oligodendrocyte precursor cells with PD-linked risk loci and reported several dysregulated genes and pathways, including regulation of tau-protein kinase activity, regulation of inclusion body assembly and protein processing involved in protein targeting to mitochondria.</p>
Single-nucleus RNA-sequencing in pre-cellularization Drosophila melanogaster embryos
Open the record for dataset details and reuse information.
Single-nucleus RNA sequencing of the cells obtained from acupoint BL23 (Shenshu) in low back pain.
GEO Series GSE312510. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
single-nucleus RNA-sequencing (snRNA-seq) of ex-vivo-perfused pig kidney cortex tissue
GEO Series GSE218413. Sus scrofa. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Bulk and single-nucleus RNA sequencing highlight immune pathways induced in individuals during an Ixodes scapularis tick bite [snRNA-Seq]
GEO Series GSE245516. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
Single-Nucleus RNA Sequencing of Developing and Mature Superior Colliculus Identifies Neuronal Diversity and Candidate Mediators of Circuit Assembly
GEO Series GSE224407. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-nucleus RNA sequencing of the mouse hypothalamus in the fed and fasted state
GEO Series GSE207736. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Single-nucleus RNA sequencing of mouse brown adipose tissue
GEO Series GSE207096. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Single-nucleus and single-cell RNA-sequencing of human pancreatic islets
GEO Series GSE207632. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Single-nucleus RNA-sequencing reveals NRF1/NFE2L1 as a key determining metabolic state and fate decision of brown adipocytes in mice [scRNA-seq]
GEO Series GSE225280. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-nucleus RNA sequencing in the post-mortem thamaus and cortex in bipolar disorder
GEO Series GSE306819. Homo sapiens. 82 samples. Type: Expression profiling by high throughput sequencing.
Low-input Nucleus Isolation and Multiplexing with Barcoded Antibodies of Mouse Sympathetic Ganglia for Single-nucleus RNA Sequencing
GEO Series GSE232286. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-nucleus sequencing deciphers lineage trajectories in rice pistils [bulk RNA-seq]
GEO Series GSE208431. Oryza sativa Japonica Group. 8 samples. Type: Expression profiling by high throughput sequencing.
Decoding the transcriptome of muscular dystrophy using single-nucleus RNA sequencing
GEO Series GSE217390. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-nucleus RNA-sequencing reveals NRF1/NFE2L1 as a key determining metabolic state and fate decision of brown adipocytes in mice
GEO Series GSE225281. Mus musculus. 14 samples. Type: Expression profiling by high throughput sequencing.
Single-nucleus RNA-sequencing of human subcutaneous adipose tissue biopsies from 84 Finnish participants.
GEO Series GSE249089. Homo sapiens. 84 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.