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26
datasets available to search
ShareScore release 0.9.0
Dataset results
26 results for “single-nucleus RNA-sequencing”
Single-cell and single-nucleus RNA-sequencing from paired normal-adenocarcinoma lung samples provides both common and discordant biological insights
<p>The datasets generated by <em>Cellranger </em>for all 24 samples (.h5 format).<br><br></p>
Single-nucleus RNA-sequencing reveals oligodendrocytes and their progenitors as vulnerable cell types in prefrontal cortex and anterior cingulate of brains with Parkinson's disease
<p>Several prior studies have proposed the involvement of various brain regions and cell types in Parkinson's disease (PD) pathology. Here, we performed snRNA-seq on the prefrontal cortex and anterior cingulate regions from post-mortem control and PD brain tissue. We found a dramatic association of oligodendrocytes and oligodendrocyte precursor cells with PD-linked risk loci and reported several dysregulated genes and pathways, including regulation of tau-protein kinase activity, regulation of inclusion body assembly and protein processing involved in protein targeting to mitochondria.</p>
Single-nucleus RNA-sequencing in pre-cellularization Drosophila melanogaster embryos
Open the record for dataset details and reuse information.
single-nucleus RNA-sequencing (snRNA-seq) of ex-vivo-perfused pig kidney cortex tissue
GEO Series GSE218413. Sus scrofa. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-nucleus and single-cell RNA-sequencing of human pancreatic islets
GEO Series GSE207632. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Single-nucleus RNA-sequencing reveals NRF1/NFE2L1 as a key determining metabolic state and fate decision of brown adipocytes in mice [scRNA-seq]
GEO Series GSE225280. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-nucleus RNA-sequencing reveals NRF1/NFE2L1 as a key determining metabolic state and fate decision of brown adipocytes in mice
GEO Series GSE225281. Mus musculus. 14 samples. Type: Expression profiling by high throughput sequencing.
Single-nucleus RNA-sequencing of human subcutaneous adipose tissue biopsies from 84 Finnish participants.
GEO Series GSE249089. Homo sapiens. 84 samples. Type: Expression profiling by high throughput sequencing.
A single-nucleus RNA-sequencing pipeline to decipher the molecular anatomy and pathophysiology of human kidneys
GEO Series GSE121862. Homo sapiens. 47 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomics and single-nucleus RNA-sequencing reveal a transcriptomic atlas of human spinal cord [DRG Spatial]
GEO Series GSE243073. Homo sapiens. 7 samples. Type: Other.
Comparative analysis of single-cell and single-nucleus RNA-sequencing in a rabbit model of retinal detachment-related proliferative vitreoretinopathy
GEO Series GSE217333. Oryctolagus cuniculus. 10 samples. Type: Expression profiling by high throughput sequencing.
A Simplified Preparation Method for Single-Nucleus RNA-Sequencing Using Long-Term Frozen Brain Tumor Tissues
GEO Series GSE268496. Homo sapiens; Mus musculus. 15 samples. Type: Expression profiling by high throughput sequencing.
Using single-nucleus RNA-sequencing to interrogate transcriptomic profiles of archived human pancreatic islets
GEO Series GSE150212. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-nucleus RNA-sequencing of unaffected control and Huntington's disease GLAST-positive iPSC-derived astrocytes
GEO Series GSE214973. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Enriched Single-Nucleus RNA-Sequencing Reveals Unique Attributes of Distal Convoluted Tubule Cells
GEO Series GSE228367. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomics and single-nucleus RNA-sequencing reveal a transcriptomic atlas of human spinal cord
GEO Series GSE243077. Homo sapiens. 22 samples. Type: Expression profiling by high throughput sequencing; Other.
Neurovascular dysfunction in GRN-associated frontotemporal dementia identified by single-nucleus RNA-sequencing of human cerebral cortex
GEO Series GSE163122. Homo sapiens. 93 samples. Type: Expression profiling by high throughput sequencing.
Single-nucleus RNA-sequencing (snRNA-seq) analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas
GEO Series GSE308103. Homo sapiens. 75 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomics and single-nucleus RNA-sequencing reveal a transcriptomic atlas of human spinal cord [Spinal spatial]
GEO Series GSE243074. Homo sapiens. 6 samples. Type: Other.
Single-nucleus total RNA-sequencing of C2C12 myoblasts via in situ polyadenylation
GEO Series GSE209780. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.