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zenodo40/100

Supplemental dataset for Northern Spotted Owl (<i>Strix occidentalis caurina</i>) genome assembly version 1.0

<p><strong>StrOccCau_1.0_nuc.fa.bz2</strong> : This FASTA format file compressed&nbsp;with bzip2&nbsp;is the file that we deposited at&nbsp;DDBJ/ENA/GenBank as a Whole&nbsp;Genome Shotgun (WGS) project under accession NIFN00000000. It is is the file that you will most likely want to download if you would like to perform an alignment to this genome assembly. This file is the assembly output from SOAPdenovo2 toolkit GapCloser version 1.12-r6 (Luo et al. 2012) without any contigs and scaffolds less than 1,000 nt and also without the contigs and scaffolds that we identified either as the mitochondrial genome sequence or as contaminant sequences.</p> <p><strong>StrOccCau_1.0_nuc_masked.fa.bz2</strong> :&nbsp;This FASTA format file compressed&nbsp;with bzip2&nbsp;is the repeat-masked (hard-masked)&nbsp;assembly output from SOAPdenovo2 toolkit GapCloser version 1.12-r6 (Luo et al. 2012) without any contigs and scaffolds less than 1,000 nt and also without the contigs and scaffolds that we identified either as the mitochondrial genome sequence or as contaminant sequences.</p> <p><strong>StrOccCau_1.0_mito.fa</strong>&nbsp;:&nbsp;This FASTA format file is the mitochondrial-genome-derived&nbsp;scaffold from the assembly output from SOAPdenovo2 toolkit GapCloser version 1.12-r6 (Luo et al. 2012).</p> <p><strong>StrOccCau_1.0.gff.bz2</strong> : This gff format file compressed this file with bzip2 contains the gene annotations of StrOccCau_1.0_nuc.fa.</p> <p><strong>StrOccCau_1.0_transcripts.fa.bz2</strong> : This FASTA format file compressed this file with bzip2 contains the sequences of the gene transcript&nbsp;sequences of the&nbsp;genes annotated&nbsp;in StrOccCau_1.0.gff.</p> <p><strong>StrOccCau_1.0_proteins.fa.bz2</strong> : This FASTA format file compressed this file with bzip2 contains the protein sequences of the genes&nbsp;annotated&nbsp;in StrOccCau_1.0.gff.</p> <p><strong>StrOccCau_1.0_RM_homology_includes_LowComplexity.out.bz2</strong> : This file provides the repeat annotations produced by the homology-based masking of StrOccCau_1.0_nuc.fa that included masking of low complexity regions and simple repeats.&nbsp;We compressed this file with bzip2.</p> <p><strong>StrOccCau_1.0_RM_DeNovo_includes_LowComplexity.out</strong> : This file provides the repeat annotations produced by the de novo masking (which followed after first performing homology-based masking) of StrOccCau_1.0_nuc.fa that included masking of low complexity regions and simple repeats.</p> <p><strong>StrOccCau_1.0_RM_homology_no_LowComplexity.out.bz2</strong> :&nbsp;This file provides the repeat annotations produced by the homology-based masking of StrOccCau_1.0_nuc.fa that did not include masking of low complexity regions and simple repeats.&nbsp;We compressed this file with bzip2.</p> <p><strong>StrOccCau_1.0_RM_DeNovo_no_LowComplexity.out</strong> :&nbsp;This file provides the repeat annotations produced by the de novo masking (which followed after first performing homology-based masking) of StrOccCau_1.0_nuc.fa that did not include&nbsp;masking of low complexity regions and simple repeats.</p> <p><strong>StrOccCau_1.0_alignments_of_light_associated_genes.txt</strong> : This file provides alignments of light-associated gene orthologs as well as assemblies of transcriptome sequences in NEXUS format.</p> <p><strong>StrOccCau_1.0_nuc_masked_SpottedBarredOwl_variant_file.vcf.bz2</strong> : This is a raw, unfiltered variant call format file compressed&nbsp;with bzip2&nbsp;that was generated after aligning&nbsp;both spotted owl and barred owl short read data aligned to StrOccCau_1.0_nuc_masked.fa.</p> <p><strong>StrOccCau_0.1.fa.bz2</strong> : This FASTA format file compressed&nbsp;with bzip2&nbsp;is the assembly output from SOAPdenovo2 toolkit GapCloser version 1.12-r6 (Luo et al. 2012).</p> <p><strong>StrOccCau_0.1_masked.fa.bz2</strong> :&nbsp;This&nbsp;FASTA format file compressed&nbsp;with bzip2&nbsp;is the repeat-masked assembly output from SOAPdenovo2 toolkit GapCloser version 1.12-r6 (Luo et al. 2012).</p> <p><strong>StrOccCau_0.2.fa.bz2</strong>&nbsp;:&nbsp;This FASTA format file compressed&nbsp;with bzip2&nbsp;is the&nbsp;assembly output from SOAPdenovo2 toolkit GapCloser version 1.12-r6 (Luo et al. 2012) without any contigs and scaffolds less than 1,000 nt.</p> <p><strong>StrOccCau_0.2_masked.fa.bz2</strong> :&nbsp;This FASTA format file compressed&nbsp;with bzip2&nbsp;is the repeat-masked assembly output from SOAPdenovo2 toolkit GapCloser version 1.12-r6 (Luo et al. 2012) without any contigs and scaffolds less than 1,000 nt.</p> <p><strong>StrOccCau_GapCloser_output_NoContamNoMito.fa.bz2</strong> : This FASTA format file compressed&nbsp;with bzip2&nbsp;is the assembly output from SOAPdenovo2 toolkit GapCloser version 1.12-r6 (Luo et al. 2012) without the contigs and scaffolds that we later identified either as the mitochondrial genome sequence or as contaminant sequences.</p> <p><strong>Citations</strong>&nbsp;- if you utilize these data, please include these citations:</p> <p>Hanna ZR., Henderson JB., Wall JD., Emerling CA., Fuchs J., Runckel C., Mindell DP., Bowie RCK., DeRisi JL., Dumbacher JP. 2017a. Supplemental dataset for Northern Spotted Owl (<em>Strix occidentalis caurina</em>) genome assembly version 1.0. <em>Zenodo</em>. DOI: 10.5281/zenodo.822859.</p> <p>Hanna ZR., Henderson JB., Wall JD., Emerling CA., Fuchs J., Runckel C., Mindell DP., Bowie RCK., DeRisi JL., Dumbacher JP. 2017b. Northern Spotted Owl (Strix occidentalis caurina) Genome: Divergence with the Barred Owl (<em>Strix varia</em>) and Characterization of Light-Associated Genes. <em>Genome Biology and Evolution</em> 9:2522&ndash;2545. DOI: 10.1093/gbe/evx158.</p>

opencc-by-4.0Jun 2017View details →
zenodo40/100

Adapter sequences used for trimming of genomic sequences in the assembly of the Northern Spotted Owl (<i>Strix occidentalis caurina</i>) genome assembly version 1.0

<p>These files provide the sequences of the adapters used in the construction of the&nbsp;genomic libraries Hanna et al. (2017a) sequenced and used to assemble&nbsp;the Northern Spotted Owl (<em>Strix occidentalis caurina</em>) genome assembly version 1.0 (Hanna et al. 2017b). These files also contain&nbsp;relevant supplemental adapter sequences from the adapter files&nbsp;included with Trimmomatic version 0.36&nbsp;(Bolger, Lohse &amp; Usadel, 2014).</p> <p><strong>SRR4011595_adapters.fa</strong> : This FASTA format file contains the full length&nbsp;sequences of the adapters Hanna et al. (2017a) used to construct the genomic library they sequenced to produced the data uploaded as&nbsp;NCBI Sequence Read Archive (SRA) run accession SRR4011595. I have also included the partial adapter sequences provided in the &quot;TruSeq3-PE-2.fa&quot;&nbsp;and &quot;NexteraPE-PE.fa&quot; files distributed with Trimmomatic version&nbsp;0.36 (Bolger, Lohse &amp; Usadel, 2014).</p> <p><strong>SRR4011596_adapters.fa</strong> : This FASTA format file contains the full length&nbsp;sequences of the adapters Hanna et al. (2017a) used to construct the genomic library they sequenced to produced the data uploaded as&nbsp;NCBI Sequence Read Archive (SRA) run accession SRR4011596. I have also included the partial adapter sequences provided in the &quot;TruSeq3-PE-2.fa&quot;&nbsp;and &quot;NexteraPE-PE.fa&quot; files distributed with Trimmomatic version&nbsp;0.36 (Bolger, Lohse &amp; Usadel, 2014).</p> <p><strong>SRR4011597_adapters.fa</strong> : This FASTA format file contains the full length&nbsp;sequences of the adapters Hanna et al. (2017a) used to construct the genomic library they sequenced to produced the data uploaded as&nbsp;NCBI Sequence Read Archive (SRA) run accession SRR4011597. I have also included the partial adapter sequences provided in the &quot;TruSeq3-PE-2.fa&quot;&nbsp;and &quot;NexteraPE-PE.fa&quot; files distributed with Trimmomatic version&nbsp;0.36 (Bolger, Lohse &amp; Usadel, 2014).</p> <p><strong>SRR4011614_adapters.fa</strong> : This FASTA format file contains the full length&nbsp;sequences of the adapters Hanna et al. (2017a) used to construct the genomic library they sequenced to produced the data uploaded as&nbsp;NCBI Sequence Read Archive (SRA) run accession SRR4011614. I have also included the partial adapter sequences provided in the &quot;TruSeq3-PE-2.fa&quot;&nbsp;and &quot;NexteraPE-PE.fa&quot; files distributed with Trimmomatic version&nbsp;0.36 (Bolger, Lohse &amp; Usadel, 2014).</p> <p><strong>SRR4011615_adapters.fa</strong> : This FASTA format file contains the full length&nbsp;sequences of the adapters Hanna et al. (2017a) used to construct the genomic library they sequenced to produced the data uploaded as&nbsp;NCBI Sequence Read Archive (SRA) run accession SRR4011615. I have also included the partial adapter sequences provided in the &quot;TruSeq3-PE-2.fa&quot;&nbsp;file distributed with Trimmomatic version&nbsp;0.36 (Bolger, Lohse &amp; Usadel, 2014).</p> <p><strong>SRR4011616_adapters.fa</strong> : This FASTA format file contains the full length&nbsp;sequences of the adapters Hanna et al. (2017a) used to construct the genomic library they sequenced to produced the data uploaded as&nbsp;NCBI Sequence Read Archive (SRA) run accession SRR4011616. I have also included the partial adapter sequences provided in the &quot;TruSeq3-PE-2.fa&quot;&nbsp;file distributed with Trimmomatic version&nbsp;0.36 (Bolger, Lohse &amp; Usadel, 2014).<br> &nbsp;<br> <strong>SRR4011617_adapters.fa</strong> : This FASTA format file contains the full length&nbsp;sequences of the adapters Hanna et al. (2017a) used to construct the genomic library they sequenced to produced the data uploaded as&nbsp;NCBI Sequence Read Archive (SRA) run accession SRR4011617. I have also included the partial adapter sequences provided in the &quot;TruSeq3-PE-2.fa&quot;&nbsp;file distributed with Trimmomatic version&nbsp;0.36 (Bolger, Lohse &amp; Usadel, 2014).</p>

opencc-by-4.0Mar 2018View details →
dryad40/100

Data from: Tall, heterogenous forests improve prey capture, delivery to nestlings, and reproductive success for Spotted Owls in southern California

<p>Predator-prey interactions can be profoundly influenced by vegetation conditions, particularly when predator and prey prefer different habitats. Although such interactions have proven challenging to study for small and cryptic predators, recent methodological advances substantially improve opportunities for understanding how vegetation influences prey acquisition and strengthen conservation planning for this group. The California Spotted Owl (<em>Strix</em> <em>occidentalis</em> <em>occidentalis</em>) is well-known as an old-forest species of conservation concern, but whose primary prey in many regions – woodrats (<em>Neotoma</em> spp.) – occurs in a broad range of vegetation conditions. Here, we used high-resolution GPS tracking coupled with nest video monitoring to test the hypothesis that prey capture rates vary as a function of vegetation structure and heterogeneity, with emergent, reproductive consequences for Spotted Owls in Southern California. Foraging owls were more successful capturing prey, including woodrats, in taller multilayered forests, in areas with higher heterogeneity in vegetation types, and near forest-chaparral edges. Consistent with these findings, Spotted Owls delivered prey items more frequently to nests in territories with greater heterogeneity in vegetation types and delivered prey biomass at a higher rate in territories with more forest-chaparral edge. Spotted Owls had higher reproductive success in territories with higher mean canopy cover, taller trees, and more shrubby vegetation. Collectively, our results provide additional and compelling evidence that a mosaic of large tree forests with complex canopy and shrubby vegetation increases access to prey with potential reproductive benefits to Spotted Owls in landscapes where woodrats are a primary prey item. We suggest that forest management activities that enhance forest structure and vegetation heterogeneity could help curb declining Spotted Owl populations while promoting resilient ecosystems in some regions.</p>

opencc-zeroDec 2022View details →
dryad40/100

Data from: Tall, heterogenous forests improve prey capture, delivery to nestlings, and reproductive success for Spotted Owls in southern California

Open the record for dataset details and reuse information.

publicDec 2022View details →
dryad36/100

Feather corticosterone reveals developmental challenges in a long‐term study of juvenile northern spotted owls

<p>1. Corticosterone is a steroid hormone integral to a variety of physiological pathways and is strongly associated with the vertebrate stress–response. In avian species, circulating corticosterone is sequestered into developing feathers and is used as an indicator of energy allocation during feather growth and widely applied in conservation physiology.</p> <p>2. The northern spotted owl (<i>Strix occidentalis caurina</i>) is a federally threatened old–growth forest obligate of conservation concern endemic to the Pacific Northwest of the United States and Canada. The effects of landscape characteristics and individual variation on early development in spotted owls remain unstudied despite long recognition of this knowledge gap and its potential importance to species conservation.</p> <p>3. We quantified corticosterone concentrations in 4,720 feathers from 1,056 juvenile spotted owls across seven study areas between 2001 and 2017. We used an information–theoretic approach to examine the environmental and individual factors related to feather corticosterone in juvenile spotted owls as an indicator of challenges during early development.</p> <p>4. Feather corticosterone was positively related to temperature and precipitation, and negatively related to juvenile mass at banding. We found strong support for an interaction between mass and precipitation, with greater amounts of precipitation being associated with higher levels of feather corticosterone in lighter juveniles. The temperature and precipitation metric with the strongest relationship with feather corticosterone occurred during the fledging period, suggesting that this period presents an energetic challenge for juvenile spotted owls. Greater juvenile mass decreased the effect of precipitation, suggesting that greater mass was important for juveniles to maintain homeostasis during fledgling.</p> <p>5. Feather corticosterone in juvenile spotted owls provided insights to the challenges faced during early development, adding to our understanding of spotted owl life history and potential for population recovery.</p>

opencc-zeroNov 2021View details →
dryad36/100

Breeding status shapes territoriality and vocalization patterns in spotted owls

<p>Vocal territory defense can vary within a species due to many factors such as sex and breeding status, influencing territory size and thus population density across a landscape. Therefore, understanding what influences variation in territorial vocalizations can help to illuminate trade-offs between territoriality and other life history demands, which benefits our general understanding of animal ecology as well as helps to inform emerging passive acoustic monitoring approaches. Here, we investigated how sex and breeding status affected territoriality and vocal behavior in the California spotted owl (<em>Strix occidentalis occidentalis</em>) in the Sierra Nevada, California, USA, using high-resolution acoustic/GPS tags. We discovered that territorial vocal behavior was related to breeding status and to a lesser extent sex. Breeding owls with fledged young had a less diverse vocal repertoire, produced fewer and quieter territorial calls, and typically called only when close to their nest. Males were also more likely to engage in territorial calling than females. Breeding spotted owls also maintained significantly smaller territories—but utilized larger home ranges—than non-breeding individuals. Our results suggest that breeding spotted owls may reduce their investment in territorial behaviors to mitigate the demands and risks associated with rearing young. Further, our results have important implications for the passive acoustic monitoring of spotted owls and, more broadly, highlight the utility of using multiple call types to detect species of interest.</p>

opencc-zeroMay 2022View details →
dryad36/100

Data from: Large trees and forest heterogeneity facilitate prey capture by California spotted owls

<p>Predators are among the most threatened animal groups globally, with prey declines contributing to their endangerment. However, assessments of the habitat conditions that influence the successful capture of different prey species are rare, especially for small, cryptic predators. Accordingly, most predator conservation plans are based on the relative importance of habitats inferred from coarse-scale <a name="_Hlk99628060"></a>studies that do not consider habitat features contributing to hunting success, which can vary among prey species. To address this limitation, we integrated high-resolution GPS tracking and nest video monitoring to characterize habitat features at prey capture locations during the nestling provisioning stage for the Spotted Owl (<em>Strix occidentalis</em>) a small, cryptic predator that has been at the center of a decades-long forest management conflict in western North America. When all prey species were considered collectively, males provisioning nests tended to capture prey: (<em>i</em>) in areas with more large-tree forest, (<em>ii</em>) in areas with more medium trees/medium canopy forest, and (<em>iii</em>) at edges between conifer and hardwood forests. However, when we considered the owl's two key prey species separately, males captured woodrats (<em>Neotoma fuscipes</em>) and Humboldt flying squirrels (<em>Glaucomys oregonensis</em>) in areas with markedly different habitat features. Our study provides clarity for forest management in mixed-ownership landscapes because different prey species achieve high densities in different habitat types. Specifically, our results suggest that promoting large trees, increasing forest heterogeneity, and creating canopy gaps in forests with medium trees/high canopy cover could benefit Spotted Owls and their prey, which has the ancillary benefit of enhancing forest resilience. Combining high-resolution GPS tagging with video-based information on prey deliveries to breeding sites can strengthen conservation planning for small predators by more rigorously defining those habitat features that are associated with successful prey acquisition.</p>

opencc-zeroJul 2022View details →
dryad36/100

Pairing functional connectivity with population dynamics to prioritize corridors for Southern California spotted owls

<p><strong>Aim:</strong> Land use change, climate change, and shifts to disturbance regimes make successful wildlife management challenging, particularly when ongoing urbanization constrains habitat and movement. Preserving and maintaining landscape connectivity is a potential strategy to support wildlife responding to these stressors. Using a novel model framework, we determined the population-level benefit of a set of identified potential corridors for spotted owl population viability.</p> <p><strong>Location:</strong> Southern California, United States.</p> <p><strong>Methods:</strong> Combining habitat suitability and dynamic metapopulation models, we compared the benefit of corridors to the Southern California spotted owl population, measured as the increase in the expected minimum abundance, both now and under a future climate. Our approach considered key corridor characteristics important to conservation decisions, namely, corridor irreplaceability and local population network benefit.</p> <p><strong>Results:</strong> We identified two corridors likely to increase Southern California spotted owl expected minimum abundance under current climate conditions. At the regional scale, of the 16 corridors evaluated, one corridor was irreplaceable (i.e. no other corridors in the network could provide a similar increase in abundance when the irreplaceable corridor was removed) and one corridor was identified as redundant (i.e. remaining corridors in the network can provide some of the increases in abundance offered by the removed corridor). Both putative corridors connected two large, populous, and similarly-sized patches. Additionally, we identified two more corridors at the local scale. We found that, under climate change, population declines may limit the benefit of connectivity for a range-restricted species like the spotted owl.</p> <p><strong>Main Conclusions:</strong> Our analytical approach highlights important criteria for corridor identification and prioritization, namely, irreplaceability versus redundancy, local versus regional benefit, and corridor impact in a changing landscape. With the capability of incorporating estimated functional connectivity into population dynamics, our modeling framework advances connectivity decision making for other species of conservation concern and archetypal taxa within ecological communities.</p>

opencc-zeroJan 2022View details →
dryad36/100

Breeding status shapes territoriality and vocalization patterns in spotted owls

Open the record for dataset details and reuse information.

publicMay 2022View details →
dryad36/100

Data from: Large trees and forest heterogeneity facilitate prey capture by California spotted owls

Open the record for dataset details and reuse information.

publicJul 2022View details →
dryad36/100

Pairing functional connectivity with population dynamics to prioritize corridors for Southern California spotted owls

Open the record for dataset details and reuse information.

publicJul 2021View details →
dryad36/100

Feather corticosterone reveals developmental challenges in a long‐term study of juvenile northern spotted owls

Open the record for dataset details and reuse information.

publicNov 2021View details →
zenodo32/100

Supplementary material 4 from: Jones GM, Gutiérrez RJ, Kramer HA, Tempel DJ, Berigan William J, Whitmore Sheila A, Peery MZ (2019) Megafire effects on spotted owls: elucidation of a growing threat and a response to Hanson et al. (2018). Nature Conservation 37: 31-51. https://doi.org/10.3897/natureconservation.37.32741

: Data type: Representative photographs of two spotted owl nest areas burned at high fire severity during the King Fire (2014) and three general areas within the Eldorado Study Area in the central Sierra Nevada, California, USA that depict three general fire severity classes of this fire.

opencc-zeroOct 2019View details →
zenodo32/100

Supplementary material 2 from: Jones GM, Gutiérrez RJ, Kramer HA, Tempel DJ, Berigan William J, Whitmore Sheila A, Peery MZ (2019) Megafire effects on spotted owls: elucidation of a growing threat and a response to Hanson et al. (2018). Nature Conservation 37: 31-51. https://doi.org/10.3897/natureconservation.37.32741

: Data type: Representative photographs of two spotted owl nest areas burned at high fire severity during the King Fire (2014) and three general areas within the Eldorado Study Area in the central Sierra Nevada, California, USA that depict three general fire severity classes of this fire.

opencc-zeroOct 2019View details →
zenodo32/100

Supplementary material 6 from: Jones GM, Gutiérrez RJ, Kramer HA, Tempel DJ, Berigan William J, Whitmore Sheila A, Peery MZ (2019) Megafire effects on spotted owls: elucidation of a growing threat and a response to Hanson et al. (2018). Nature Conservation 37: 31-51. https://doi.org/10.3897/natureconservation.37.32741

: Data type: Representative photographs of two spotted owl nest areas burned at high fire severity during the King Fire (2014) and three general areas within the Eldorado Study Area in the central Sierra Nevada, California, USA that depict three general fire severity classes of this fire.

opencc-zeroOct 2019View details →
zenodo32/100

Supplementary material 3 from: Jones GM, Gutiérrez RJ, Kramer HA, Tempel DJ, Berigan William J, Whitmore Sheila A, Peery MZ (2019) Megafire effects on spotted owls: elucidation of a growing threat and a response to Hanson et al. (2018). Nature Conservation 37: 31-51. https://doi.org/10.3897/natureconservation.37.32741

: Data type: Representative photographs of two spotted owl nest areas burned at high fire severity during the King Fire (2014) and three general areas within the Eldorado Study Area in the central Sierra Nevada, California, USA that depict three general fire severity classes of this fire.

opencc-zeroOct 2019View details →
zenodo32/100

Supplementary material 1 from: Jones GM, Gutiérrez RJ, Kramer HA, Tempel DJ, Berigan William J, Whitmore Sheila A, Peery MZ (2019) Megafire effects on spotted owls: elucidation of a growing threat and a response to Hanson et al. (2018). Nature Conservation 37: 31-51. https://doi.org/10.3897/natureconservation.37.32741

: Data type: Representative photographs of two spotted owl nest areas burned at high fire severity during the King Fire (2014) and three general areas within the Eldorado Study Area in the central Sierra Nevada, California, USA that depict three general fire severity classes of this fire.

opencc-zeroOct 2019View details →
zenodo32/100

Supplementary material 5 from: Jones GM, Gutiérrez RJ, Kramer HA, Tempel DJ, Berigan William J, Whitmore Sheila A, Peery MZ (2019) Megafire effects on spotted owls: elucidation of a growing threat and a response to Hanson et al. (2018). Nature Conservation 37: 31-51. https://doi.org/10.3897/natureconservation.37.32741

: Data type: Representative photographs of two spotted owl nest areas burned at high fire severity during the King Fire (2014) and three general areas within the Eldorado Study Area in the central Sierra Nevada, California, USA that depict three general fire severity classes of this fire.

opencc-zeroOct 2019View details →
dryad32/100

Conspecific and congeneric interactions shape increasing rates of breeding dispersal of northern spotted owls

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publicMar 2021View details →
dryad28/100

Social status, forest disturbance, and Barred Owls shape long-term trends in breeding dispersal distance of Northern Spotted Owls

<p>Dispersal among breeding sites in territorial animals (i.e. breeding dispersal) is driven by numerous selection pressures, including competition and spatiotemporal variation in habitat quality. The scale and trend of dispersal movements over time may signal changing conditions within the population or on the landscape. We examined 2,158 breeding dispersal events from 694 male and 608 female individually-marked Northern Spotted Owls (<i>Strix occidentalis caurina</i>) monitored over 28 years on seven study areas to assess the relative importance of individual (sex, experience), reproductive (annual productivity, mate availability), and environmental (forest alteration, presence of competitor) sources of variation in breeding dispersal distance. Median breeding dispersal distance was 3.17 km, with 99% of all breeding dispersal events less than 37 km. Mean annual dispersal distances increased by 2.43 km in Oregon and 9.40 km in Washington between 1990 and 2017, which coincided with increases in annual detections of non-native Barred Owl (<i>S. varia</i>). Frequency of breeding dispersal events, both among and within individuals, also increased over time. Female owls moved farther than males (median of 3.26 km and 3.10 km respectively), and birds with less experience (territory tenure) moved farther than those with more experience. Owls that were single in the year prior to dispersal moved 13–31% farther than those paired prior to dispersal. The greatest environmental change occurring over the course of our study was the expansion of Barred Owl populations. Breeding dispersal distance was positively related to Barred Owls in the study area and disturbance within the originating territory. While it appears that social factors continue to be important drivers of breeding dispersal distance in Spotted Owls, increased competition from Barred Owls and habitat alteration have a contributing effect. Increased breeding dispersal distances should be of concern for conservation efforts and considered in population monitoring because changing dispersal behavior may lead to higher rates of mortality and/or emigration from historic study areas.</p>

opencc-zeroOct 2020View details →

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Allen Brain Atlas

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allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

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abode-home-cage
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Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

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dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record