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14 results for “submergence tolerance”
Fig. 5 in Transcriptome profiling of two Dactylis glomerata L. cultivars with different tolerance in response to submergence stress
Fig. 5. Gene Ontology (GO) classification of genes that only expressed differently in tolerant material 'Dianbei' and expressed differently between two materials all the time. (a) Gene Ontology (GO) classification of 1395 genes only expressed differently in tolerant material 'Dianbei'; (b) GO classification of 18 genes that were found to expressed differently between two materials all the time.
Fig. 1 in Transcriptome profiling of two Dactylis glomerata L. cultivars with different tolerance in response to submergence stress
Fig. 1. Hierarchical clustering analysis of changes in gene expression in two D. glomerata cultivars under submergence tolerance.
Fig. 3 in Transcriptome profiling of two Dactylis glomerata L. cultivars with different tolerance in response to submergence stress
Fig. 3. Gene Ontology (GO) classification of assembled unigenes in two D. glomerata cultivars, submergence-tolerant 'Dianbei' and submergence-sensitive 'Anba'.
Fig. 4 in Transcriptome profiling of two Dactylis glomerata L. cultivars with different tolerance in response to submergence stress
Fig. 4. Scatterplot of enriched KEGG pathways for differentially expressed genes between two D. glomerata cultivars.
Data from: Identification of the submergence tolerance QTL come quick drowning1 (CQD1) in Arabidopsis thaliana
Global climate change is predicted to increase water precipitation fluctuations and lead to localized prolonged floods in agricultural fields and natural plant communities. Thus, understanding the genetic basis of submergence tolerance is crucial in order to improve plant survival under these conditions. In this study, we performed a quantitative trait locus (QTL) analysis in Arabidopsis to identify novel candidate genes for increased submergence tolerance by using Kas-1 and Col (gl1) parental accessions and their derived recombinant inbred lines (RILs). We measured survival after submergence in dark for a 13-day period and used median lethal time, LT50 values for the QTL analysis. A major QTL, the Come Quick, Drowning (CQD1) locus, was detected in 2 independent experiments on the lower arm of chromosome 5 involved in higher submergence tolerance in the parental accession Kas-1. For fine-mapping, we then constructed near isogenic lines (NILs) by backcrossing the CQD1 QTL region. We also analyzed QTL regions related to size, leaf number, flowering, or survival in darkness and none of the QTL related to these traits overlapped with CQD1. The submergence tolerance QTL, CQD1, region detected in this study includes genes that have potential to be novel candidates effecting submergence tolerance such as trehalose-6-phosphate phosphatase and respiratory burst oxidase protein D. Gene expression and functional analysis for these genes under submergence would reveal the significance of these novel candidates and provide new perspectives for understanding genetic basis of submergence tolerance.
Fig. 2 in Transcriptome profiling of two Dactylis glomerata L. cultivars with different tolerance in response to submergence stress
Fig. 2. Venn diagram of differentially expressed genes (DEGs).
Data from: Identification of the submergence tolerance QTL come quick drowning1 (CQD1) in Arabidopsis thaliana
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Genetic and Molecular Characterization of Submergence Response Identifies Subtol6 as a Major Submergence Tolerance Locus in Maize
GEO Series GSE63429. Zea mays. 36 samples. Type: Expression profiling by high throughput sequencing.
Distinct Physiological and Transcriptomic Responses between Tolerant and Susceptible Rapeseed (Brassica napus) Germplasm to Submergence Stress
GEO Series GSE314699. Brassica napus. 12 samples. Type: Expression profiling by high throughput sequencing.
Preformed aerenchyma determines the differential tolerance response under partial submergence imposed by fresh and saline water flooding in rice
GEO Series GSE124618. Oryza sativa. 12 samples. Type: Expression profiling by high throughput sequencing.
The Submergence Tolerance Regulator Sub1A Mediates Stress-responsive Expression of AP2/ERF Transcription Factors
GEO Series GSE17704. Oryza sativa. 20 samples. Type: Expression profiling by array.
Microarray data from aerial tissue of submergence tolerant M202(Sub1) and intolerant M202
GEO Series GSE18930. Oryza sativa. 8 samples. Type: Expression profiling by array.
BKK1/BAK7 and TCP21 form a positive feedback loop to facilitate submergence tolerance in plants
GEO Series GSE280792. Arabidopsis thaliana. 30 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome level regulations for desiccation and submergence tolerance in intertidal seaweed species Ulva lactuca
GEO Series GSE97769. Ulva lactuca. 7 samples. Type: Expression profiling by high throughput sequencing.
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