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188 results for “swine”
Physiological parameters for three farm animal species (cattle, sheep, and swine) as the basis for the development of generic physiologically based kinetic models
<p><strong>IMPORTANT : PLEASE DISREGARD VERSION 1 OF THIS UPLOAD SINCE IT INCLUDES ERRONEOUS INFORMATION.</strong></p> <p>This excel file (DOI: 10.5281/zenodo.3433224) provides physiological parameters and their inter-individual variability (mean, coefficient of variation, sample size) for three farm animal species: cattle (<em>Bos taurus</em>), sheep (<em>Ovis aries</em>), and swine (<em>Sus scrofa domesticus</em>). These physiological parameters were estimated based on the results of extensive literature searches and specific experimental data described in Lautz et al., (2020). This file is associated with R codes (DOI: 10.5281/zenodo.3432796) for generic PBK models, partition coefficient Quantitative Structure Activity Relationship (QSAR) models for each farm animal species and parameterisation of the model.</p> <p>The full data collection and implementation of the models using case studies are described in Lautz et al., 2020 (10.1016/j.toxlet.2019.10.008).</p>
African Swine Fever Worldwide Epidemiology Data - OIE Webscrape example - Geocoded using Google API and Manual
<p>Example African Swine Fever dataset generated by programs described in following publication </p> <p>Title: Web-scraping programmatic techniques in aggregating difficult to access OIE WAHIS animal disease outbreak information; using African Swine Fever in Europe as an example.</p> <p>Short running title: Methods for web-scraping OIE WAHIS data.</p> <p>Abstract: This study describes and makes available new methods for acquiring difficult to access, publicly available, disease surveillance data. It uses World Organisation for Animal Heath (OIE) data on African Swine Fever (ASF) outbreaks in Belarus and its neighbouring European countries to showcase the importance of adequate disease surveillance data to inform decision-making. The data acquired from these methods allow for large-scale, geospatial outbreak mapping and summary statistics of any terrestrial disease listed on the OIE World Animal Health Information System (WAHIS) database. These techniques will make important epidemiological data more accessible to the scientific community and aid in gaining further insight into the occurrence and spread of OIE listed diseases in a timely manner, fulfilling an important function of disease surveillance.</p>
Cellular and Humoral Immune Responses after Immunisation with Low Virulent African Swine Fever Virus in the Large White Inbred Babraham Line and Outbred Domestic Pigs
<p>Raw data for manuscript. Contains temperature, clinical scores, qPCR, blood cell numbers and immune responses over time for two groups of pigs immunised with low virulent African swine fever virus and challenged with highly virulent virus. Data for each panel or figure is displayed on a separate worksheet in the file. The readme worksheet contains a brief description of each figure. The majority of data is displayed in an XY table format, with the number of days post immunisation with low virulent virus indicated.</p>
Supplementary dataset to publication: Approaching the complexity of Crimean-Congo hemorrhagic fever virus serology: a study in swine
<p>For the detection of anti-CCHFV antibodies in swine, we established a swine-specific in-house ELISA, indirect immunofluorescence assay and a virus neutralization test. Uploaded data contains sample performance in each test. Samples used in this study include swine serum samples from Germany and Spain.</p>
BIOPEP-UWM: Calculations for top 23 selected peptides from ATHpin ranking of Cynara cardunculus swine blood hydrolysate FNF
<p>Calculations by BIOPEP (https://biochemia.uwm.edu.pl/biopep-uwm/) for top 23 selected peptides from ATHpin ranking of Cynara cardunculus swine blood hydrolysate FNF.</p>
Raw Data for the article: Donor Preconditioning with Inhaled Sevoflurane Mitigates the Effects of Ischemia-Reperfusion Injury in a Swine Model of Lung Transplantation
<p>Primary graft dysfunction (PGD) and ischemia-reperfusion injury (IRI) occur in up to 30% of patients undergoing lung transplantation and may impact on the clinical outcome. Several strategies for the prevention and treatment of PGD have been proposed, but with limited use in clinical practice. In this study, we investigate the potential application of sevoflurane (SEV) preconditioning to mitigate IRI after lung transplantation. The study included two groups of swines (preconditioned and not preconditioned with SEV) undergoing left lung transplantation after 24-hour of cold ischemia. Recipients' data was collected for 6 hours after reperfusion. Outcome analysis included assessment of ventilatory, hemodynamic, and hemogasanalytic parameters, evaluation of cellularity and cytokines in BAL samples, and histological analysis of tissue samples. Hemogasanalytic, hemodynamic, and respiratory parameters were significantly favorable, and the histological score showed less inflammatory and fibrotic injury in animals receiving SEV treatment. BAL cellular and cytokine profiling showed an anti-inflammatory pattern in animals receiving SEV compared to controls. In a swine model of lung transplantation after prolonged cold ischemia, SEV showed to mitigate the adverse effects of ischemia/reperfusion and to improve animal survival. Given the low cost and easy applicability, the administration of SEV in lung donors may be more extensively explored in clinical practice.</p>
Supplementary material from the study on survival of African swine fever virus in feed, bedding materials and mechanical vectors, and their potential role in virus transmission
<p><span>Supplementary material from the experimental studies developed to analyse the survival of African swine fever virus in feed, bedding materials and mechanical vectors, and their potential role in virus transmission. </span></p> <p> </p>
Wound image and transcriptome datasets of swine acute wounds
Open the record for dataset details and reuse information.
African Swine Fever spread across Asia, 2018-2019
<p>Information on the locations and dates of AFS outbreaks throughout Asia was gathered from the OIE. Immediate Notifications and Follow-up reports were accessed from the Report Archive of the World Animal Health Information Database (WAHIS) Interface.<a href="#_ftn1">[1]</a> Reported ASF outbreaks were selected if they were located in an Asian country between 1 August 2018 and 31 December 2019. For each report, the following information was extracted: date of report, outbreak start date and end date (if applicable), location (latitude/longitude and by name), unit type, number of susceptible animals, number of cases, deaths and number of animals killed and disposed of. Reports were only included for domestic pig populations; reports of occurrence in wild boar were excluded. Data were imported into Microsoft Excel 2016 and all reports were combined into a single dataset for further analysis. Error checking was performed by ensuring logical values were recorded for each data point and by random selection of 5% of the data to manually check against the original reports.</p> <p> </p> <p><a href="#_ftnref1">[1]</a> https://www.oie.int/wahis_2/public/wahid.php/Wahidhome/Home</p>
Novel multiplex TaqMan assay for differentiation of the four major pathogenic Brachyspira species in swine
<p>Table S1</p> <p>503 Brachyspira samples used for validation of the novel 5-plex qPCR assay and comparison of results obtained by four independent PCR assays</p>
Pig population data complementing the annual report on the epidemiological analyses of African swine fever (ASF) in the European Union - Lithuania
<p>This dataset contains swine population data.</p> <p><strong>Reporting authorities contributing to the data collection:</strong></p> <ul> <li>ASF2024_POP_EXTRACTION_LT - State Food and Veterinary Service (SFVS)</li> <li>ASF2023_POP_EXTRACTION_LT - State Food and Veterinary Service (SFVS)</li> <li>ASF2022_POP_EXTRACTION_LT - State Food and Veterinary Service (SFVS)*</li> <li>ASF2022_POP_EXTRACTION_LT - State Food and Veterinary Service (SFVS)</li> </ul> <p> </p> <p> </p> <p>*This version of the animal population data has been republished with the establishment and subnit identification code (estabId, subUnitId) columns empty due to data protection reasons</p>
Pig population data complementing the annual report on the epidemiological analyses of African swine fever (ASF) in the European Union - Slovakia
<p>This dataset contains swine population data.</p> <p><strong>Reporting authorities contributing to the data collection:</strong></p> <ul> <li>ASF2024_POP_EXTRACTION_SK - State Veterinary and Food Institute (SVPU)</li> <li>ASF2023_POP_EXTRACTION_SK - State Veterinary and Food Institute (SVPU)</li> <li>ASF2022_POP_EXTRACTION_SK - State Veterinary and Food Institute (SVPU)*</li> <li>ASF2022_POP_EXTRACTION_SK - State Veterinary and Food Institute (SVPU)</li> </ul> <p> </p> <p> </p> <p>*This version of the animal population data has been republished with the establishment and subnit identification code (estabId, subUnitId) columns empty due to data protection reasons</p>
Laboratory data complementing the annual report on the epidemiological analyses of African swine fever (ASF) in the European Union - Romania
<p>This dataset contains ASF laboratory analytical results in domestic pigs and wild boar.</p> <p><strong>Reporting authorities contributing to the data collection:</strong></p> <ul> <li>ASF2024_RO - National Sanitary Veterinary and Food Safety Authority (ANSVSA)</li> <li>ASF2023_RO - National Sanitary Veterinary and Food Safety Authority (ANSVSA)</li> <li>ASF2022_RO - National Sanitary Veterinary and Food Safety Authority (ANSVSA)*</li> <li>ASF2022_RO - National Sanitary Veterinary and Food Safety Authority (ANSVSA)</li> </ul> <p> </p> <p> </p> <p>*This version of the ASF laboratory data has been republished with the subunit identification code (sampUnitIds.subUnitId) column empty due to data protection reasons</p>
Laboratory data complementing the annual report on the epidemiological analyses of African swine fever (ASF) in the European Union - Lithuania
<p>This dataset contains ASF laboratory analytical results in domestic pigs and wild boar.</p> <p><strong>Reporting authorities contributing to the data collection:</strong></p> <ul> <li>ASF2024_LT - National Food and Veterinary Risk Assessment Institute (NMVRVI)</li> <li>ASF2023_LT - National Food and Veterinary Risk Assessment Institute (NMVRVI)</li> <li>ASF2022_LT - National Food and Veterinary Risk Assessment Institute (NMVRVI)*</li> <li>ASF2022_LT - National Food and Veterinary Risk Assessment Institute (NMVRVI)</li> </ul> <p> </p> <p> </p> <p>*This version of the ASF laboratory data has been republished with the subunit identification code (sampUnitIds.subUnitId) column empty due to data protection reasons</p>
Laboratory data complementing the annual report on the epidemiological analyses of African swine fever (ASF) in the European Union - Greece
<p>This dataset contains ASF laboratory analytical results in domestic pigs and wild boar.</p> <p><strong>Reporting authorities contributing to the data collection:</strong></p> <ul> <li>ASF2024_GR - Hellenic Ministry of Rural Development and Food (MINAGRIC)</li> <li>ASF2023_GR - Hellenic Ministry of Rural Development and Food (MINAGRIC)</li> </ul>
Pig population data complementing the annual report on the epidemiological analyses of African swine fever (ASF) in the European Union - Latvia
<p>This dataset contains swine population data.</p> <p><strong>Reporting authorities contributing to the data collection:</strong></p> <ul> <li>ASF2024_POP_EXTRACTION_LV - Agricultural Data Centre (LDC)</li> <li>ASF2023_POP_EXTRACTION_LV - Agricultural Data Centre (LDC)</li> <li>ASF2022_POP_EXTRACTION_LV - Agricultural Data Centre (LDC)*</li> <li>ASF2022_POP_EXTRACTION_LV - Agricultural Data Centre (LDC)</li> </ul> <p> </p> <p> </p> <p>*This version of the animal population data has been republished with the establishment and subnit identification code (estabId, subUnitId) columns empty due to data protection reasons</p>
Laboratory data complementing the annual report on the epidemiological analyses of African swine fever (ASF) in the European Union - Czechia
<p>This dataset contains ASF laboratory analytical results in domestic pigs and wild boar.</p> <p><strong>Reporting authorities contributing to the data collection:</strong></p> <ul> <li>ASF2024_CZ - State Veterinary Administration (SVA)</li> <li>ASF2023_CZ - State Veterinary Administration (SVA)</li> <li>ASF2022_CZ - State Veterinary Administration (SVA)*</li> <li>ASF2022_CZ - State Veterinary Administration (SVA)</li> </ul> <p> </p> <p> </p> <p>*This version of the ASF laboratory data has been republished with the subunit identification code (sampUnitIds.subUnitId) column empty due to data protection reasons</p>
Pig population data complementing the annual report on the epidemiological analyses of African swine fever (ASF) in the European Union - Italy
<p>This dataset contains swine population data.</p> <p><strong>Reporting authorities contributing to the data collection:</strong></p> <ul> <li>ASF2024_POP_EXTRACTION_IT - Istituto Zooprofilattico Sperimentale dell'Abruzzo e del Molise (IZSAM)</li> <li>ASF2023_POP_EXTRACTION_IT - Istituto Zooprofilattico Sperimentale dell'Abruzzo e del Molise (IZSAM)</li> <li>ASF2022_POP_EXTRACTION_IT - Istituto Zooprofilattico Sperimentale dell'Abruzzo e del Molise (IZSAM)*</li> <li>ASF2022_POP_EXTRACTION_IT - Istituto Zooprofilattico Sperimentale dell'Abruzzo e del Molise (IZSAM)</li> </ul> <p> </p> <p> </p> <p>*This version of the animal population data has been republished with the establishment and subnit identification code (estabId, subUnitId) columns empty due to data protection reasons</p>
Pig population data complementing the annual report on the epidemiological analyses of African swine fever (ASF) in the European Union - Estonia
<p>This dataset contains swine population data.</p> <p><strong>Reporting authorities contributing to the data collection:</strong></p> <ul> <li>ASF2024_POP_EXTRACTION_EE - Agricultural Registers and Information Board (ARIB)</li> <li>ASF2023_POP_EXTRACTION_EE - Agricultural Registers and Information Board (ARIB)</li> <li>ASF2022_POP_EXTRACTION_EE - Agricultural Registers and Information Board (ARIB)*</li> <li>ASF2022_POP_EXTRACTION_EE - Agricultural Registers and Information Board (ARIB)</li> </ul> <p> </p> <p> </p> <p>*This version of the animal population data has been republished with the establishment and subnit identification code (estabId, subUnitId) columns empty due to data protection reasons</p>
Laboratory data complementing the annual report on the epidemiological analyses of African swine fever (ASF) in the European Union - Slovakia
<p>This dataset contains ASF laboratory analytical results in domestic pigs and wild boar.</p> <p><strong>Reporting authorities contributing to the data collection:</strong></p> <ul> <li>ASF2024_SK - State Veterinary and Food Institute (SVPU)</li> <li>ASF2023_SK - State Veterinary and Food Institute (SVPU)</li> <li>ASF2022_SK - State Veterinary and Food Institute (SVPU)*</li> <li>ASF2022_SK - State Veterinary and Food Institute (SVPU)</li> </ul> <p> </p> <p> </p> <p> </p> <p>*This version of the ASF laboratory data has been republished with the subunit identification code (sampUnitIds.subUnitId) column empty due to data protection reasons</p>
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
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DANDI Archive for NWB datasets
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International Brain Laboratory public data
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OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.