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Figure 9 in Evaluation of the Chilli veinal mottle virus CP gene expressing transgenic Nicotiana benthamiana plants for disease resistance against the virus
Figure 9. ELISA plate readings (O.D at 405nm) of leaf samples of transgenic lines (T1-T8) and control plants after 15 dpi.
Figure 7 in Evaluation of the Chilli veinal mottle virus CP gene expressing transgenic Nicotiana benthamiana plants for disease resistance against the virus
Figure 7. PCR Products of the hpt gene from T0 transgenic plants. Lane 1-9 are transgenic. Lane 10, +ve control. Lane 11, control (untransformed) plant.
Figure 6. DNA bands from T0 in Evaluation of the Chilli veinal mottle virus CP gene expressing transgenic Nicotiana benthamiana plants for disease resistance against the virus
Figure 6. DNA bands from T0 transgenic and Agro-infilterated plants. Lane 1-10, transgenic plants. Lane 11-13, agro-infilterated plants.
Figure 3 in Evaluation of the Chilli veinal mottle virus CP gene expressing transgenic Nicotiana benthamiana plants for disease resistance against the virus
Figure 3. Symptoms development on propagative host plants after mechanical inoculation with ChiVMV isolate ATIPK. (a) N. tabacum showing mosaic, mottling and vein clearing (b) C. annum (cv. Loungi) displays the symptoms of mottling, mosaic, leaf deformation and vein clearing.
Figure 2 in Evaluation of the Chilli veinal mottle virus CP gene expressing transgenic Nicotiana benthamiana plants for disease resistance against the virus
Figure 2. Symptoms of ChiVMV on chilli leaves collected from Islamabad. (a) Shows mottling and severe vein clearing and distortion. (b) Shows reduced leaf size with mottling and distortion.
Scans of leaves dissected in phyllotactic order: complementation of ago7 mutant A. thaliana plants with truncated promoter transgenes
<p>This transgenic complementation experiment is described in a paper by Hoyer et al. (2019): <a href="https://doi.org/10.1002/pld3.102">https://doi.org/10.1002/pld3.102</a></p> <p>Adaxial (ad) and abaxial (ab) surfaces of rosettes were photographed in between removal of leaves, to enable checking that leaves were removed in the correct phyllotactic order.<strong> </strong>A manifest file with file SHA-1 sums is included.</p> <p>Metadata and LeafJ measurements have been made available separately, to facilitate updates -- see <a href="https://github.com/jshoyer/raspi-photo-and-leaf-scan-metadata">https://github.com/jshoyer/raspi-photo-and-leaf-scan-metadata</a>, archived as <a href="https://doi.org/10.5281/zenodo.1340636">https://doi.org/10.5281/zenodo.1340636</a></p> <p>Seed was plated and growth started on 2016-08-26. Leaves were dissected and scanned 33 and 35 days post-stratification (2016-09-28 and 30).</p>
Time-lapse photograph dataset: complementation of ago7 mutant A. thaliana plants with truncated promoter transgenes
<p>This transgenic complementation experiment is described in a paper by Hoyer et al. (2019): <a href="https://doi.org/10.1002/pld3.102">https://doi.org/10.1002/pld3.102</a></p> <p>Time-stamped photographs are provided in twelve directories by camera (twelve overlapping fields of view) and a manifest file with file SHA-1 sums is included.</p> <p>Metadata have been made available separately, to facilitate updates -- see <a href="https://github.com/jshoyer/raspi-photo-and-leaf-scan-metadata">https://github.com/jshoyer/raspi-photo-and-leaf-scan-metadata</a>, archived as <a href="https://doi.org/10.5281/zenodo.1340636">https://doi.org/10.5281/zenodo.1340636</a></p> <p>Seed was plated and growth started on 2016-08-26.</p>
Genes Downregulated in the ABA+DEX group in the 35S:AtbZIP62-GR transgenic plants
<p>Genes down regulated in ABA+DEX treated seedlings compared with ABA treated seedlings in the 35S:AtZIP62-GR transgenic plants.</p>
The common bean aquaporin gene PvXIP1;2 identified by GWAS at seedling stage confers drought and osmotic resistance in transgenic plants
<p>This is the trait data of survival rate used to conduct a GWAS</p>
Fig. 9 in Opine biosynthesis in naturally transgenic plants: Genes and products
Fig. 9. Evolutionary relationships of susL, rolD homologs in Agrobacterium and plants. The optimal tree with the sum of branch length = 4.915 shown. The analysis involved 37 nucleotide sequences. There were a total of 137 positions in the final dataset. Further details as in the legend to Fig. 1.
Fig. 5 in Opine biosynthesis in naturally transgenic plants: Genes and products
Fig. 5. Evolutionary relationships of cus homologs in Agrobacterium and plants. The optimal tree with the sum of branch length = 2.438 is shown. The analysis involved 41 nucleotide sequences. There were a total of 354 positions in the final dataset. Further details as in the legend to Fig. 1.
Fig. 2 in Opine biosynthesis in naturally transgenic plants: Genes and products
Fig. 2. Evolutionary relationships of ags(*) and chs(**) homologs in Agrobacterium and plants. The optimal tree with the sum of branch length = 1.404 is shown. The analysis involved 12 nucleotide sequences. There were a total of 647 positions in the final dataset. Further details as in the legend to Fig. 1.
Fig. 4 in Opine biosynthesis in naturally transgenic plants: Genes and products
Fig. 4. Evolutionary relationships of mas2′ homologs in Agrobacterium and plants. The optimal tree with the sum of branch length = 3.135 is shown. The analysis involved 24 nucleotide sequences. There were a total of 874 positions in the final dataset. Further details as in the legend to Fig. 1.
Fig. 8 in Opine biosynthesis in naturally transgenic plants: Genes and products
Fig. 8. Evolutionary relationships of vis and ocs homologs in Agrobacterium and plants. The vis and ocs genes are indicated with * and ** respectively. Genes marked in bold code for well-characterized enzymes, the underlined gene is marked as ocs based on its high sequence similarity to other ocs genes. The optimal tree with the sum of branch length = 2.875 is shown. The analysis involved 21 nucleotide sequences. There were a total of 1056 positions in the final dataset. Further details as in the legend to Fig. 1.
Fig. 7 in Opine biosynthesis in naturally transgenic plants: Genes and products
Fig. 7. Evolutionary relationships of nos homologs in Agrobacterium and plants. The optimal tree with the sum of branch length = 2.895 is shown. The analysis involved 11 nucleotide sequences. There were a total of 708 positions in the final dataset. Further details as in the legend to Fig. 1.
Fig. 6 in Opine biosynthesis in naturally transgenic plants: Genes and products
Fig. 6. Evolutionary relationships of mis homologs in Agrobacterium and plants. The optimal tree with the sum of branch length = 1.968 is shown. The analysis involved 33 nucleotide sequences. There were a total of 660 positions in the final dataset. Further details as in the legend to Fig. 1.
Genes upregulated in the 35S:MYB-GR transgenic plants after DEX treatment
<p>Genes upregulated in the <em>35S:MYB-GR</em> transgenic plants after DEX treatment.</p>
Figure 10 in Evaluation of the Chilli veinal mottle virus CP gene expressing transgenic Nicotiana benthamiana plants for disease resistance against the virus
Figure 10. Symptoms development in transgenic plants after challenging with ChiVMV isolate ATIPK at15dpi. A) Resistance transgenic lines. B) Moderately resistance transgenic lines. C) Moderately susceptible transgenic lines.
Figure 8 in Evaluation of the Chilli veinal mottle virus CP gene expressing transgenic Nicotiana benthamiana plants for disease resistance against the virus
Figure 8. PCR products from transgenic plants. (a) Lane 1-3, represent PCR product from agro-infilterated plants. Lane 4, control plant. (b) Lane 1-9, RT- PCR product from transgenic plants represent the presence of CP gene transcription. Lane 10, represents untransformed control sample.
Figure 5 in Evaluation of the Chilli veinal mottle virus CP gene expressing transgenic Nicotiana benthamiana plants for disease resistance against the virus
Figure 5. Maximum likelihood tree of ChiVMV isolate ATIPK on nucleotide sequence of CP gene with 22 ChiVMV isolates from the world. The bootstrap analysis was conducted in 1000 replications. ZYMV (AB127936) sequence is used as out-group.
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Allen Brain Atlas
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DANDI Archive for NWB datasets
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International Brain Laboratory public data
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OpenNeuro
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