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Dendrometer band measurement data from two tidal forest plots at GCE 11 on the Altamaha River in Southeast Georgia from December 2014 to December 2020
We established two 0.1-ha plots in December 2013. In each plot, we identified and measured DBH (diameter at breast height) of every tree using standard diameter tapes. We also placed dendrometric bands on 40 trees (20 per plot) in December 2013. Bands were measured in December 2014 as baseline measurements and yearly thereafter.
Carbon and Nitrogen Across Two ULTRA-Ex Urban to Rural Gradients in Massachusetts 2010
As part of the Boston University-led, Urban Long-Term Research Area - Exploratory Award (ULTRA-Ex), we established 135 circular, 15 m radius biometric plots extending across two Boston urban-to-rural gradients (Boston MA to Petersham MA and Boston MA to Worcester MA). The plots were stratified based on neighborhood (1 km2 surrounding area) characteristics for population density, impervious surface area fraction, and land cover. Within each plot we measured aboveground live and dead biomass, species characteristics, ground cover characteristics, and soil properties.
Physical soil characteristics, microbial community composition, extracellular enzymatic activity, biologically based phosphorus (BBP) pools, and available phosphorus from two soil depths, four microhabitats, and four landforms at the Jornada Experimental Range, 2021.
This dataset contains physical soil characteristics, PLFA based microbial community composition, extracellular enzymatic activity, nitrate and ammonium activity, and phosphorus availability in various phosphorus pools (Biologically Based Phosphorus, potassium sulfate, Olsen-P). Soils were collected from two depths (0-2cm, 2-30 cm), four microhabitats (grass, shrub, biocrust, interspace), and four landforms (alluvial flat, alluvial fan remnant, erosional scarplet, fan piedmont – see coordinates) within the Jornada Experimental Range in July 2021 to answer questions about how these variables change across these spatial scales in drylands. This project was a collaboration between researchers at New Mexico State University and The University of Texas at El Paso as part of the Drylands Critical Zone Thematic Cluster within the Critical Zone Network. This dataset is complete.
Altering pH changes competition dynamics between two crayfish species for both food and shelter resources
As climate change continues, alterations in abiotic variables within habitats will also change. One of the key variables for aquatic systems is pH. We were interested in how lowered pH altered the behavioral characteristics of two keystone species: Faxonius rusticus, a non-native crayfish in the upper midwest and Faxonius virilis, the native crayfish. We dosed size-matched individuals in separate tanks for four days and than placed these individuals in a flow through mesocosm to allow them to compete over food and shelter resources. Behavior was recorded from midnight to 4 am. Pairs of animals were exposed to pH levels varying from ambient (8.4) to 6.4. The experiment took place at the University of Michigan's Biological Station in northern Michigan in the United States.
Ecosystem-level Carbon dioxide fluxes in two long-term experimental wet sedge tundra sites near Toolik Lake, AK, ARC LTER 1994.
Ecosystem-level Carbon dioxide fluxes were measured in two long-term experimental wet sedge tundra sites near Toolik Lake, AK. Experimental treatments at each site included factorial nitrogenXphosphorus, greenhouse and shade house and were begun in 1985 (Sag site) or in 1988 (Toolik sites). Fluxes were measured on quadrats that were later sampled for biomass and leaf area.
Fine-scale meteorological observations from walking traverses in two Phoenix Area Social Survey (PASS) 2017 neighborhoods (2019)
This dataset includes human-biometeorological observations from 2.5 km walking traverses with a mobile weather station. The traverses occurred in two 2017 Phoenix Area Social Survey neighborhoods (U18: South Phoenix/Salt River (Audubon) and W15: Camelback Mountain) on one day in June and October, at 12pm and 4pm on each day. Specifically, air temperature, humidity, wind speed, and radiant energy (infrared and solar radiation) in 3-dimensions were measured at 2-second intervals. Additionally, mean radiant temperature was calculated from the radiation measurements. The meteorological observations are spatially referenced with latitude and longitude coordinates. The paths through the neighborhoods were chosen to maximize proximity to PASS 2017 participants’ homes.
Concentration and Age of Nonstructural Carbon Reserves in Two Trees at Harvard Forest 2012
We know surprisingly little about whole-tree nonstructural carbon (NSC; primarily sugars and starch) budgets. Even less well understood is the mixing between recent photosynthetic assimilates (new NSC) and previously stored reserves. And, NSC turnover times are poorly constrained. We characterized the distribution of NSC in the stemwood, branches, and roots of two temperate trees, and we used the continuous label offered by the radiocarbon (14C) bomb spike to estimate the mean age of NSC in different tissues. NSC in branches and outermost stemwood growth rings had the 14C signature of the current growing season. However, NSC in older above- and below-ground tissues was enriched in 14C, indicating that it was produced from older assimilates. Radial patterns of 14C in stemwood NSC showed strong mixing of NSC across the youngest growth rings, with limited.
Neural responses to naturalistic clips of behaving animals in two different task contexts
Open the record for dataset details and reuse information.
Two sessions of resting state with closed eyes for patients with depression in treatment course (NFB, CBT or No treatment groups)
Open the record for dataset details and reuse information.
Nonperturbative phase diagram of two-dimensional N=(2,2) super-Yang--Mills theory --- data release
<p>This HDF5 file collects data and analysis results for non-perturbative lattice field theory calculations investigating two-dimensional supersymmetric SU(N) Yang--Mills theory with four supercharges. See the README for further information.</p>
Dataset of "Glue-assisted Exfoliation of Two-dimensional Sulfur-rich Niobium Thiophosphate (Nb4P2S21) for Sulfur-equivalent Electrode Study in Lithium Storage"
<p>Two-dimensional (2D) layered thiophosphates have garnered attention for advanced batteries due to their open ionic diffusion channels, high capacity, and unique catalytic properties. However, their potential in energy storage applications remains largely unexplored. In this study, we report for the first time a 2D transition metal thiophosphate (Nb4P2S21) with high sulfur content. Nb4P2S21, synthesized via chemical vapor transport (CVT), is treated as a sulfur-equivalent material with better conductivity than sulfur, suitable for high-capacity lithium storage. The bulk material can be delaminated into high-quality nanoplates via glue-assisted grinding exfoliation, both displaying a layered quasi-one-dimensional (quasi-1D) morphology, which shortens the ion diffusion path and promises enhanced rate performance compared to larger lateral 2D materials. Density functional theory (DFT) calculations indicate that Nb4P2S21 has a direct bandgap of 1.64 eV (HSE06 method), with exfoliated counterparts showing near-infrared (NIR) photoluminescence at 755 nm, broadening potential applications to NIR-based devices. By tuning the working voltage window for lithium-ion batteries (LIBs) and controlling lithiation product formation, the material exhibits distinct electrochemical characteristics at 0 ~ 2.6 V, 0.5 ~ 2.6 V, 1.0 ~ 2.6 V, and 1.5 ~ 2.6 V. However, sulfur-rich electrodes in carbonate electrolytes demonstrate limited electrochemical potential due to polysulfide formation, leading to detrimental side reactions with carbonate-based electrolytes. Transitioning to ether-based electrolytes improves the initial reversible capacity and Coulombic efficiency of Nb4P2S21 by stabilizing the formed polysulfides. Despite this improvement, the material still mirrors the shuttle effect in lithium-sulfur batteries, diminishing active sulfur and undermining battery integrity. Further EDS and TOF-SIMS analyses of post-cycled electrode materials show significant sulfur loss and precipitation within the electrodes, exacerbating the shuttle effect and causing battery failure. Implementing strategies used in lithium-sulfur batteries, such as introducing polar host catalysts, could enhance the potential of these materials.</p>
A genome-wide study of ruminants reveals two endogenous retrovirus families still active in goats
<p>Additional file - A genome-wide study of ruminants reveals two endogenous retrovirus families still active in goats </p>
Dataset for the comparison of two Computational Thinking (CT) test for upper primary school (grades 3-4) : the Beginners' CT test (BCTt) and the competent CT test (cCTt)
<p>This dataset contains quantitative student data acquired during the administration of two validated Computational Thinking (CT) assessments for upper primary school (grades 3 and 4): the Beginners' CT test (BCTt) [1] and the comptent CT test (cCTt) [2]</p> <p>To compare the psychometric properties of both instruments a comparative analysis was conducted with data acquired in schools in Portugal from the same school districts. More specifically, we analyse the results of: </p> <p>- the BCTt test administered in March 2020 to 374 students in grades 3-4,</p> <p>- the cCTt test administered in April 2021 to 201 different students in grades 3-4.</p> <p>These students had no prior experience in Computational Thinking, as this was not part of the national curriculum at the times of administration. </p> <p> </p> <p>The detailed psychometric comparison is published in Frontiers in Psychology - Educational Psychology [3] and provides indications regarding the use of both instruments for grades 3-4. </p> <p> </p> <p>A README is included and provides additional information regarding :</p> <p>- the requirements for re-use. </p> <p>- the specific content of the 2 csv files</p> <p> </p> <p>The BCTt is available upon request to maria.zapata@urjc.es and the cCTt items are available in [2] with an editable version being available upon request to laila.elhamamsy@epfl.ch. </p> <p>In case of other inquiries, please contact: laila.elhamamsy@epfl.ch, maria.zapata@urjc.es or pedro.marcelino@treetree2.org</p> <p> </p> <p><strong>References</strong></p> <p>[1] M. Zapata-Cáceres, E. Martín-Barroso and M. Román-González, "Computational Thinking Test for Beginners: Design and Content Validation," <em>2020 IEEE Global Engineering Education Conference (EDUCON)</em>, 2020, pp. 1905-1914, doi: 10.1109/EDUCON45650.2020.9125368.</p> <p>[2] El-Hamamsy, L., Zapata-Cáceres, M., Barroso, E. M., Mondada, F., Zufferey, J. D., & Bruno, B. (2022). The Competent Computational Thinking Test: Development and Validation of an Unplugged Computational Thinking Test for Upper Primary School. <em>Journal of Educational Computing Research</em>, <em>60</em>(7), 1818–1866. <a href="https://doi.org/10.1177/07356331221081753">https://doi.org/10.1177/07356331221081753</a></p> <p>[3] <a href="http://www.frontiersin.org/Community/WhosWhoActivity.aspx?sname=LailaEl-Hamamsy&UID=781667">Laila El-Hamamsy</a>* , <a href="http://www.frontiersin.org/Community/WhosWhoActivity.aspx?sname=Mar%C3%ADaZapata-C%C3%A1ceres&UID=2073859">María Zapata-Cáceres</a>, Pedro Marcelino, Jessica Dehler Zufferey, <a href="http://www.frontiersin.org/Community/WhosWhoActivity.aspx?sname=BarbaraBruno&UID=893934">Barbara Bruno</a>, <a href="http://www.frontiersin.org/Community/WhosWhoActivity.aspx?sname=EstefaniaMart%C3%ADn&UID=2086979">Estefanía Martín-Barroso</a> and <a href="http://www.frontiersin.org/Community/WhosWhoActivity.aspx?sname=MarcosRom%C3%A1n-Gonz%C3%A1lez&UID=760761">Marcos Román-González</a> (2022). <a href="http://www.frontiersin.org/Journal/Abstract.aspx?d=0&name=Educational_Psychology&ART_DOI=10.3389/fpsyg.2022.1082659">Comparing the psychometric properties of two primary school Computational Thinking (CT) assessments for grades 3 and 4: the Beginners' CT test (BCTt) and the competent CT test (cCTt)</a>. <em>Front. Psychol.</em> doi:10.3389/fpsyg.2022.1082659</p>
Raw Particle Number Size-Distribution Data of twin-DMPS equipped with two CPCs for nanoparticle detection for SMEAR II station, Hyytiälä, Finland, Spring 2017
<p>Raw size-Distribution data from twin-DMPS system (Aalto et al., 2001), where the nano-DMA (measuring up to 40 nm, short Hauke type DMA) is quipped with two detectors:<br> a TSI 3776 and a modified Airmodus A20 (Kangasluoma et al., 2015)</p> <p>Data acquired during in March-May 2017 at the SMEAR II station in Hyytiälä, Finland.<br> Data associated with the publication Stolzenburg, Laurila et al. (2023), Atmos. Meas. Techn., "Improved counting statistics of an ultrafine differential mobility particle size spectrometer system"</p> <p>Files DMYYDDMM_A20.Dat contain the raw DMPS data, with YYMMDD indicating the day of the measurement.<br> Data are provided alternating between data acquired with the nano-DMA and with the long-DMA, on a scan by scan basis.<br> First line of each scan cycle (for both DMAs) always indicates the start and end times of the voltage scan.<br> Second line gives the parameters related to the DMPS as given below:<br> (sheath flow in [l per min], aerosol flow in [l per min], DMA inner electrode diameter in [m], DMA outer electrode diameter in [m], DMA classification length in [m], other parameters)<br> Following lines give<br> (for long-DMA): set voltage at DMA [in V], concentration measured by TSI3772 in [per cm3]<br> (for nano_DMA): et voltage at DMA [in V], concentration measured by TSI 3776 in [per cm3], concentration measured by mod. Airmodus A20 in [per cm3]</p> <p>File dmps_data_format_specifier.text gives a conversion from voltage to diameter and indicates the measurement time at each voltage during the stepping of the DMPS.<br> Needs to be used to convert measured concentrations in counts per set-interval.</p> <p>Files GR_J_overview.xlsx gives size-distribution derived quantities during that campaign.<br> Header defines Date, Growth Rate and Formation Rate measured at different sizes [in nm] and by the two different CPCs connected to the nano-DMA.<br> Growth rates in [nm per h], formation rate in [per cm3 per s].</p> <p>Other data related to the campaign can be obtained from the corresponding author upon reasonable request.<br> juha.kangasluoma@helsinki.fi</p> <p>References:</p> <p>Stolzenburg, Laurila et al. "Improved counting statistics of an ultrafine differential mobility particle size spectrometer system",<br> Atmos. Meas. Techn., in press, 2023</p> <p>Aalto et al., "Physical characterization of aerosol particles during nucleation events",<br> Tellus B, vol. 53, pp. 344-358, 2001</p> <p>Kangasluoma et al., "Sub-3 nm Particle Detection with Commercial TSI 3772 and Airmodus A20 Fine Condensation Particle Counters",<br> Aerosol Sci. Techn., vol. 49, pp. 674-681, 2015</p>
The Jefferson Project 2017 water quality data from two vertical profiler stations in Lake George, NY, USA.
The Jefferson Project at Lake George – a partnership between Rensselaer Polytechnic Institute, IBM Research, and Lake George Association – combines Internet of Things technology and powerful analytics with science to create a new model for environmental monitoring and prediction. The project is building a computing platform that captures and analyzes data from a network of sensors tracking water quality and movement. These sensor data are combined with other monitoring and experimental data to create a thorough understanding of the factors that drive the lake’s food web and overall water quality. More information about The Jefferson Project is available at https://jeffersonproject.rpi.edu/ In 2017, The Jefferson Project deployed two vertical profiler stations on the lake, collecting data on water quality and meteorology. Meteorological data have been included with the Jefferson Project Weather Station dataset for 2017. These vertical profiler stations are named VP_AnthonysNose and VP_TeaIsland. The water quality data are collected by EXO2 Multi-parameter sonde sensors. The sensors collect data at 1 meter depth increments, starting at 1 meter and proceeding to 2 meters off bottom. The data is transferred in near real-time to an off-site database for monitoring and review. The data provided have undergone data correction by Jefferson Project researchers.
The Jefferson Project 2018 water quality data from two vertical profiler stations in Lake George, NY, USA.
The Jefferson Project at Lake George -- a partnership between Rensselaer Polytechnic Institute, IBM Research, and Lake George Association -- combines Internet of Things technology and powerful analytics with science to create a new model for environmental monitoring and prediction. The project is building a computing platform that captures and analyzes data from a network of sensors tracking water quality and movement. These sensor data are combined with other monitoring and experimental data to create a thorough understanding of the factors that drive the lake's food web, hydrology, and water quality. More information about The Jefferson Project is available at https://jeffersonproject.rpi.edu/ In 2018, The Jefferson Project deployed two vertical profiler stations on the lake, collecting data on water quality and weather. Meteorological data have been included with the Jefferson Project Weather Station dataset for 2018. These vertical profiler stations are named VP_AnthonysNose and VP_TeaIsland. The water quality data are collected by YSI EXO2 Multi-parameter sonde sensors. The sensors collect data at 1 meter depth increments, starting at 1 meter and proceeding to 2 meters off bottom. The data is transferred in near real-time to an off-site database for monitoring and review. The data provided have undergone data correction by Jefferson Project researchers.
Survival Data of Strengthened and Non-Strengthened Oysters on Two Restored Reefs in Georgia, USA
The eastern oyster, Crassostrea virginica, is known to respond to chemical cues from their predators by strengthening their shell in defense. The chemical cues homarine and trigonelline, found in the urine of blue crabs, Callinectes sapidus, are two metabolic waste products known to cause this inducible defense in juvenile oysters. We tested whether this shell strengthening defense is beneficial for juvenile oysters in a restored reef setting by inducing oyster spat with chemical cues, placing them onto a restored reef and measuring their survival for 50-100 days. The first reef location is a previously restored reef (approximately 10 years old) with limited physical exposure to wind waves and boat wake. Juvenile oysters were placed at this site in September of 2021 and survival was measured for 49 days. The second reef location is a newly restored oyster reef (less than 1 year old) that acts as a living shoreline, with significant exposure to boat wake and wind waves. Juvenile oysters were protected from predation using mesh wrapping with an opening of 1 square cm and placed at the reef site in April 2023, where survival was monitored for 103 days. Site locations: Reef 1 (dock site) - 31.988948°, -81.024001° Reef 2 (living shoreline reef) - 32.067957°,-80.985005°
The Biomass and Plant Functional Traits of Leymus chinensis Affected by Genotypic Diversity and Soil Nitrogen Addition through a Two-year Experiment, Tianjin, China, 2021-2023
In order to investigate the effects of soil nitrogen addition on the genotypic diversity of Leymus chinensis, 12 genotypes of Leymus chinensis were used as plant material and a two-factor experimental design was carried out in this study. Factor one was genotypic diversity of L. chinensis, including three levels: mono-genotype (G1), three genotypes (G3), and six genotypes (G6). Factor two was the soil nitrogen addition level, which included four levels: no nitrogen addition (N0), 2.5 g N/(m²·a) nitrogen application (N2.5), 5 g N/(m²·a) nitrogen application (N5), and 10 g N/(m²·a) nitrogen application (N10). Each treatment had 12 combinations as replicates, and 12 genotypes of L. chinensis were used. The frequency of each genotype was standardized across all treatment levels of genotypic diversity × soil nitrogen addition. The experiment commenced in September 2021 and soil nitrogen was applied every 2 months. Plants were cultivated in the experimental field at Nankai University, but were moved to a greenhouse for overwintering from November to February each year. During the experiment, there were no stresses or disturbances such as shading, drought, or insect feeding; weeds were regularly removed.
Survival, growth and biomass estimates of two dominant palmetto species of south-central Florida from 1981 - 2022, ongoing at 5-year intervals
This data package is comprised of three datasets all pertaining to two dominant palmetto species, Serenoa repens and Sabal etonia, at Archbold Biological Station in south-central Florida. The first dataset, palmetto_data, contains survival and growth data across multiple years, habitats and experimental treatments. The second dataset, seedlings_data, follows the fate of marked putative palmetto seedlings in the field to assess survivorship and growth. The final dataset, harvested_palmetto_data, contains size data and estimated dry mass (biomass in grams) of 33 destructively harvested palmetto plants (17 S. repens and 16 S. etonia) of varying sizes and across habitats. Thirty-two of these were used to calculate estimated biomass, using regression equations, for palmettos sampled in the palmetto_data. Below we summarize experimental setup and data collected for each dataset. Palmetto data Demographic data were collected as three separate components. The first component compared growth among habitats. Starting in 1981, equal numbers of both palmetto species were marked across scrubby flatwoods (oak scrub) and flatwoods habitats (3 sites per habitat) for a total of 240 marked plants. These habitats had not burned within the last decade, but historically had experienced a natural fire return interval of 5 - 20 years prior to this studies initiation. The second component added an additional 400 palmettos (200 of each species), which were marked in sand pine scrub (n = 200) in 1985 and sandhill habitat (n = 200) in 1989 on Archbold's Red Hill. At the time of this project's initiation, all Red Hill management units were last burned in 1927 and were considered long unburned. Part of Archbold's management plan included restoring fire into some management units while leaving others long unburned to serve as reference units. Therefore, for our second component, we were able to create a 2x2 factorial design using habitat types on Red Hill and fire management as factors, with 100
Modeling the effects of lake morphology on chloride retention and salt-driven stratification in two urban lakes in St. Paul, MN
Road salt inputs have caused widespread salinization of urban lakes in northern temperate regions. Watershed characteristics are known to be important drivers of lake chloride concentrations, but there has been less focus on how lake morphometry influences seasonal and interannual dynamics in lake chloride, and how these chloride levels may alter mixing in the water column. We analyzed chloride retention for two urban lakes (Como Lake and Lake McCarrons) in Saint Paul, Minnesota, that are in adjacent watersheds and have similar surface areas, but differ in depth and water residence time. Summer chloride concentrations were negatively related to total summer precipitation for Como Lake (maximum depth 2.2 m), but the relationship was less strong for Lake McCarrons (maximum depth 7.6 m). We used a zero-dimensional model to simulate chloride dynamics in both lakes and tracked the fate of chloride over time. In Como Lake, the mass of chloride in the lake turns over within three years, whereas chloride inputs are retained for >10 years in Lake McCarrons. We then used a one-dimensional hydrodynamic lake model (GLM-AED) to examine how lake depth affects how current chloride loading rates alter lake mixing. Salt inputs significantly extended the duration of summer stratification for simulated lakes with depths of 8 m or more, and salt inputs increased the number of days of hypoxia and anoxia across all depths. These results underscore the importance of considering lake morphometry in understanding the effects of salt inputs on lake ecosystems.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.