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72 results for “usage data”
Temperature, floral density, and Osmia pollen usage data from seven study sites around the Rocky Mountain Biological Laboratory, Colorado: 2013-2023
Data were collected as part of a study of population dynamics of solitary, cavity-nesting Hymenoptera. Nesting structures ("trap-nests") were established at five study sites along an elevational gradient around the Rocky Mountain Biological Laboratory in 2013. Two additional study sites were added in 2014, and one of the original study sites was dropped at the end of 2015. At each site, a HOBO data-logger placed under a centrally located trap-nest records air temperatures hourly. Floral densities are recorded at each site, typically 1-2 times per week, throughout the growing season, for specific plant taxa known to be used as pollen sources by cavity-nesting bees. In addition, pollen samples are taken from the nests of cavity-nesting bees and the constituent plant taxa identified by microscopic comparison with a reference pollen collection from the study area.
Data from: Visual pigment chromophore usage in Nicaraguan Midas cichlids: Phenotypic plasticity and genetic assimilation of cyp27c1 expression
<p>Code and Data associated with "Visual pigment chromophore usage in Nicaraguan Midas cichlids: Phenotypic plasticity and genetic assimilation of <em>cyp27c1</em> expression"</p> <h2><span>Abstract</span></h2> <p><span>The wide-ranging photic conditions found across aquatic habitats may act as selective pressures potentially driving rapid evolution and diversity in the visual system of teleost fishes. Fine-tuning of visual sensitivities in many fish species relies on regulating the two components of visual pigments, the opsin protein and the chromophore. Many studies have focused on opsin gene expression or opsin sequence divergence in fishes inhabiting contrasting habitats. However, variation in chromophore usage across photic habitats has received less attention. Species from the Nicaraguan Midas cichlid complex, <em>Amphilophus </em>cf <em>citrinellus </em>[Günther 1864], have independently colonized seven isolated crater lakes of varying photic conditions resulting in repeated examples of small adaptive radiations. Here, we investigate variation in <em>cyp27c1</em>, the main enzyme involved in chromophore exchange, in response to photic environments in the wild, we measure its genetic component using laboratory-reared fish and test the effect of different rearing light conditions on <em>cyp27c1</em> expression. We found that photic environments significantly predict variation in <em>cyp27c1</em> expression in wild populations and that this variation seems to be genetically assimilated in two populations. We found that light-induced <em>cyp27c1</em> expression is variable across populations (i.e., genotype-by-environment interactions) and correlated with local photic conditions thus highlighting <em>cyp27c1</em> as a key factor of visual ecology in cichlid fishes.</span></p> <p><span>Keywords: <em>cyp27c1 </em>gene expression, sensory ecology, visual plasticity, Neotropical cichlids </span></p>
Crowdsourcing vibration data stemming from different transportation usages
<p> </p> <p>Crowdsourcing vibration data stemming from different activities and transportation usages (by trains, by buses, by bicycles by walking). We present a comprehensive dataset that provides the pattern of five activities walking, cycling, taking a train, a bus or a taxi. The measurements are carried out by embedded sensor accelerometer in smartphones. The dataset offers dynamic responses of subjects carrying smartphones in varied styles as they performing the five activities through vibrations acquired by accelerometers. The dataset contains corresponding time stamps and vibrations in three directions longitudinal, horizontal, and vertical stored in an Excel Macro-enabled Workbook (xlsm) format can be used to train an AI model in a smartphone which has potentials to collect people’s vibration data and decides what movement is being conducted. Besides, with more data are received, the database can be updated and it can be fed to train the model with a larger dataset. The prevalent of the smartphone opens the door of crowdsensing which leads to the pattern of people talking public transports can be understood. Furthermore, the time consumed in each activity is available in the dataset. Therefore, with a better understanding of people using public transports, the service and schedule can be planned perceptively. Activities to obtain the dataset are jointly funded by H2020 and Hitachi Europe.</p>
Supplementary data for Willemsen et al., 2024 "Novel high-quality amoeba genomes reveal widespread codon usage mismatch between giant viruses and their hosts".
<p>Supplementary data for Willemsen et al., 2024 "Novel high-quality amoeba genomes reveal widespread codon usage mismatch between giant viruses and their hosts". The data set consists of five folders: “Codon_usage_amoebae_and_viruses”, "Genome_annotations_amoebae", "Phylogenetic_trees_18S_amoebae", “Phylogenomic_trees_amoebae”, and "Viral_integration_detection_amoebae". The “Codon_usage_amoebae_and_viruses” folder contains for each amoeba host the calculated codon usage tables in the subfolder "codon_usage_table_host", the calculated codon usage preferences using different scores in the subfolder "codon_usage_scores_host", and the calculated codon usage preferences of giant viruses versus each host in the subfolder "codon_usage_scores_viruses_vs_host". The giant viruses in the subfolder "codon_usage_scores_viruses_vs_host" are organised by viral family and genus in separate sub-subfolders. The "Genome_annotations_amoebae" folder contains the generated genome annotations in different formats and the manually curated mitochondrial genome annotations for each amoeba host. The "Phylogenetic_trees_18S_amoebae" contains for the eukaryotic phyla <em>Discosea</em>, <em>Heterolobosea</em>, and <em>Tubulinea, </em>the 18S rRNA nucleotide alignments, distance matrices, and computed phylogenetic trees. The folder "Phylogenomic_trees_amoebae" contains for the eukaryotic clades <em>Amoebozoa</em> and <em>Discoba, </em>the protein alignment matrices and computed phylogenomic trees. The folder "Viral_integration_detection_amoebae" contains the MCP databases used (fasta file, alignment file, HMM profile and DIAMOND BLASTX database) and the MCP sequences detected in this study and the blast results of these. </p>
Geostrophic wind shear from CFSR v2 data for usage in WAsP
<p>The change of the geostrophic wind speed has an impact on boundary layer mixing that can be important for microscale flow modelling for wind energy purposes. The WAsP software is often used for this purpose. This dataset contains the climatological geostrophic wind shear and direction over the whole global on a 0.5 degree grid that has been used in WAsP 12. It was obtained from the 6-hourly CFSR v2 reanalysis for the period 2011 to 2017 (see https://doi.org/10.5065/D61C1TXF). The omni-directional geostrophic wind shear vector denotes how much the geostrophic wind speed is changing over a certain vertical distance. Because we are interested in geostrophic wind shear changes that contribute to turbulent mixing in the atmospheric boundary layer, it was estimated by using the data on pressure levels from the pressure level closest to the surface up to 500 hPa above that heights.p><p dir="ltr">More details about the implementation of the model in the WAsP software and a validation can be found in the corresponding technical report:<br>Floors, R. R., Troen, I., & Kelly, M. C. (2018). <i>Implementation of large-scale average geostrophic wind shear in WAsP12.1i>. DTU Wind Energy. DTU Wind Energy E No. 0169p><p><br>p><ul><li>meandgdz_2010_2017_CFSRv3.nc: version with coordinate reference system in the coordinates for usage in GIS programs. NaN values at the poles are filled with 0.0, i.e. assuming barotropic atmosphere, which avoids crashes in the pywasp code. A single sector variable has been added, indicating that these values are valid for all wind direction, as opposed to other files that have values for each wind direction sector (for example: https://data.dtu.dk/articles/dataset/ERA5_atmospheric_stability_for_usage_in_WAsP_12_8/19576042). Naming conventions are in accordance with the windkit package (https://docs.wasp.dk/windkit/)</p> <p>Mirror of https://data.dtu.dk/articles/dataset/Geostrophic_wind_shear_from_CFSR_v2_data_for_usage_in_WAsP/21975482</p>
ADS usage versus region GDP per capita (data)
<p>These files contain the data used for constructing figure 2 in "The ADS in the Information Age - Impact on Discovery" (http://adsabs.harvard.edu/abs/2012opsa.book..253H, arXiv:1106.5644). This figure shows the fraction of ADS world usage (for specific regions) as a function of GDP per capita (all values normalized by their 1997 value). For specifics: see paper. The data have been uploaded as a JPG figure, plain text file and a TAR archive with files used by the graphing program DataGraph (http://www.visualdatatools.com/DataGraph/).</p>
Data: Evolution of anatomical concept usage over time: Mining 200 years of biodiversity literature
<p>This data package contains data and results corresponding to the paper titled "Evolution of anatomical concept usage over time: Mining 200 years of biodiversity literature". </p>
RePAST Quiz-game-tour (usage data)
<p>RePAST Quiz-game-tour (usage data)</p>
Web Data Commons (December 2020) Property and Datatype Usage Dataset
<p>This is a dataset about the usage of properties and datatypes in the <a href="http://webdatacommons.org/structureddata/2020-12/stats/stats.html">Web Data Commons RDFa, Microdata, Embedded JSON-LD, and Microformats Data Sets (December 2020)</a> based on the <a href="http://commoncrawl.org/2020/10/september-2020-crawl-archive-now-available/">Common Crawl September 2020 archive</a>. The dataset has been produced using the <a href="https://doi.org/10.5281/zenodo.6258887">RDF Property and Datatype Usage Scanner v1.0.0</a>, which is based on the <a href="https://jena.apache.org/">Apache Jena</a> framework. Only RDFa and embedded JSON-LD data were considered, as Microdata and Microformats do not incorporate explicit datatypes.</p> <p><strong>Dataset Properties</strong></p> <ul> <li><strong>Size</strong>: 0.6 GiB compressed, 11.0 GiB uncompressed, 53 641 457 rows plus 1 head line determined using <code class="language-bash">gunzip -c measurements.csv.gz | wc -l</code></li> <li><strong>Parsing Failures</strong>: The scanner failed to parse 45 307 472 triples (~0.1 %) of the source dataset (containing 37 971 812 425 triples). The main reasons for failures were malformed IRIs and illegal character encodings.</li> <li><strong>Content</strong>: <ul> <li>CATEGORY: The category (<em>html-embedded-jsonld</em> or <em>html-rdfa</em>) of the Web Data Commons file that has been measured.</li> <li>FILE_URL: The URL of the Web Data Commons file that has been measured.</li> <li>MEASUREMENT: The applied measurement with specific conditions, one of: <ul> <li><strong>UnpreciseRepresentableInDouble</strong>: The number of lexicals that are in the lexical space but not in the value space of <code>xsd:double</code>.</li> <li><strong>UnpreciseRepresentableInFloat</strong>: The number of lexicals that are in the lexical space but not in the value space of <code>xsd:float</code>.</li> <li><strong>UsedAsDatatype</strong>: The total number of literals with the datatype.</li> <li><strong>UsedAsPropertyRange</strong>: The number of statements that specify the datatype as range of the property.</li> <li><strong>ValidDateNotation</strong>: The number of lexicals that are in the lexical space of <code>xsd:date</code>.</li> <li><strong>ValidDateTimeNotation</strong>: The number of lexicals that are in the lexical space of <code>xsd:dateTime</code>.</li> <li><strong>ValidDecimalNotation</strong>: The number of lexicals that represent a number with decimal notation and whose lexical representation is thereby in the lexical space of <code>xsd:decimal</code>, <code>xsd:float</code>, and <code>xsd:double</code>.</li> <li><strong>ValidExponentialNotation</strong>: The number of lexicals that represent a number with exponential notation and whose lexical representation is thereby in the lexical space of <code>xsd:float</code>, and <code>xsd:double</code>.</li> <li><strong>ValidInfOrNaNNotation</strong>: The number of lexicals that equals either <code>INF</code>, <code>+INF</code>, <code>-INF</code> or <code>NaN</code> and whose lexical representation is thereby in the lexical space of <code>xsd:float</code>, and <code>xsd:double</code>.</li> <li><strong>ValidIntegerNotation</strong>: The number of lexicals that represent an integer number and whose lexical representation is thereby in the lexical space of <code>xsd:integer</code>, <code>xsd:decimal</code>, <code>xsd:float</code>, and <code>xsd:double</code>.</li> <li><strong>ValidTimeNotation</strong>: The number of lexicals that are in the lexical space of <code>xsd:time</code>.</li> <li><strong>ValidTrueOrFalseNotation</strong>: The number of lexicals that equal either <code>true</code> or <code>false</code> and whose lexical representation is thereby in the lexical space of <code>xsd:boolean</code>.</li> <li><strong>ValidZeroOrOneNotation</strong>: The number of lexicals that equal either <code>0</code> or <code>1</code> and whose lexical representation is thereby in the lexical space of <code>xsd:boolean</code>, and <code>xsd:integer</code>, <code>xsd:decimal</code>, <code>xsd:float</code>, and <code>xsd:double</code>.</li> </ul> <strong>Note</strong>: Lexical representation of <code>xsd:double</code> values in embedded JSON-LD got normalized to always use exponential notation with up to 16 fractional digits (see <a href="https://github.com/jsonld-java/jsonld-java/blob/v0.13.1/core/src/main/java/com/github/jsonldjava/core/RDFDataset.java#L648">related code</a>). Be careful by drawing conclusions from according <strong>Valid…</strong> and <strong>Unprecise…</strong> measures.</li> <li>PROPERTY: The property that has been measured.</li> <li>DATATYPE: The datatype that has been measured.</li> <li>QUANTITY: The count of statements that fulfill the condition specified by the measurement per file, property and datatype.</li> </ul> </li> </ul> <p><strong>Preview</strong></p> <pre><code>"CATEGORY","FILE_URL","MEASUREMENT","PROPERTY","DATATYPE","QUANTITY" "html-embedded-jsonld","http://data.dws.informatik.uni-mannheim.de/structureddata/2020-12/quads/dpef.html-embedded-jsonld.nq-00000.gz","UnpreciseRepresentableInDouble","http://schema.org/height","http://www.w3.org/2001/XMLSchema#string","11" "html-embedded-jsonld","http://data.dws.informatik.uni-mannheim.de/structureddata/2020-12/quads/dpef.html-embedded-jsonld.nq-00000.gz","UnpreciseRepresentableInDouble","http://www.w3.org/ns/csvw#value","http://www.w3.org/2001/XMLSchema#string","27" "html-embedded-jsonld","http://data.dws.informatik.uni-mannheim.de/structureddata/2020-12/quads/dpef.html-embedded-jsonld.nq-00000.gz","UnpreciseRepresentableInDouble","http://schema.org/saturatedFatContent","http://www.w3.org/2001/XMLSchema#string","1" … "html-rdfa","http://data.dws.informatik.uni-mannheim.de/structureddata/2020-12/quads/dpef.html-rdfa.nq-05166.gz","ValidZeroOrOneNotation","http://purl.org/goodrelations/v1#hasMaxValue","http://www.w3.org/2001/XMLSchema#float","2" "html-rdfa","http://data.dws.informatik.uni-mannheim.de/structureddata/2020-12/quads/dpef.html-rdfa.nq-05166.gz","ValidZeroOrOneNotation","http://purl.org/goodrelations/v1#hasMinValue","http://www.w3.org/2001/XMLSchema#float","4" "html-rdfa","http://data.dws.informatik.uni-mannheim.de/structureddata/2020-12/quads/dpef.html-rdfa.nq-05166.gz","ValidZeroOrOneNotation","http://rdfs.org/sioc/ns#num_replies","http://www.w3.org/2001/XMLSchema#integer","1062"</code> </pre> <p><strong>Note</strong>: The data contain malformed IRIs, like "<code>xsd:dateTime</code>" (instead of probably "<code>http://www.w3.org/2001/XMLSchema#dateTime</code>"), which are caused by missing namespace definitions in the original source website.</p>
Mapping of promoter usage QTL using RNA-seq data reveals their contributions to complex traits
<p>Supporting data associated with the manuscript "Mapping of promoter usage QTL using RNA-seq data reveals their contributions to complex traits". These include:</p> <ul> <li><strong>StringTie2.438.GEUVADIS.gtf.gz</strong> - Assembled transcriptome using RNA-seq from 438 samples from the GEUVADIS project by StringTie2</li> <li><strong>puQTL_nominal_output.txt.gz</strong> - puQTL results from QTLtools nominal pass</li> <li><strong>puQTL_conditional_output.txt.gz</strong> - puQTL results from QTLtools conditional pass</li> <li><strong>eQTL_nominal_output.txt.gz</strong> - eQTL results from QTLtools nominal pass</li> <li><strong>eQTL_conditional_output.txt.gz</strong> - eQTL results from QTLtools conditional pass</li> </ul> <p>See <a href="https://qtltools.github.io/qtltools/">https://qtltools.github.io/qtltools/</a> for column descriptions of QTL mapping results.</p>
Web Data Commons (October 2021) Property and Datatype Usage Dataset
<p>This is a dataset about the usage of properties and datatypes in the <a href="http://webdatacommons.org/structureddata/2021-12/stats/stats.html">Web Data Commons RDFa, Microdata, Embedded JSON-LD, and Microformats Data Sets (October 2021)</a> based on the <a href="https://commoncrawl.org/2021/11/october-2021-crawl-archive-now-available/">Common Crawl October 2021 archive</a>. The dataset has been produced using the <a href="https://doi.org/10.5281/zenodo.6338129">RDF Property and Datatype Usage Scanner v2.1.1</a>, which is based on the <a href="https://jena.apache.org/">Apache Jena</a> framework. Only RDFa and embedded JSON-LD data were considered, as Microdata and Microformats do not incorporate explicit datatypes.</p> <p><strong>Dataset Properties</strong></p> <ul> <li><strong>Size</strong>: 0.2 GiB compressed, 4.4 GiB uncompressed, 20 361 829 rows plus 1 head line determined using <code class="language-bash">gunzip -c measurements.csv.gz | wc -l</code></li> <li><strong>Parsing Failures</strong>: The scanner failed to parse 45 833 332 triples (~0.1 %) of the source dataset (containing 38 812 275 607 triples).</li> <li><strong>Content</strong>: <ul> <li>CATEGORY: The category (<em>html-embedded-jsonld</em> or <em>html-rdfa</em>) of the Web Data Commons file that has been measured.</li> <li>FILE_URL: The URL of the Web Data Commons file that has been measured.</li> <li>MEASUREMENT: The applied measurement with specific conditions, one of: <ul> <li><strong>UnpreciseRepresentableInDouble</strong>: The number of lexicals that are in the lexical space but not in the value space of <code>xsd:double</code>.</li> <li><strong>UnpreciseRepresentableInFloat</strong>: The number of lexicals that are in the lexical space but not in the value space of <code>xsd:float</code>.</li> <li><strong>UsedAsDatatype</strong>: The total number of literals with the datatype.</li> <li><strong>UsedAsPropertyRange</strong>: The number of statements that specify the datatype as range of the property.</li> <li><strong>ValidDateNotation</strong>: The number of lexicals that are in the lexical space of <code>xsd:date</code>.</li> <li><strong>ValidDateTimeNotation</strong>: The number of lexicals that are in the lexical space of <code>xsd:dateTime</code>.</li> <li><strong>ValidDecimalNotation</strong>: The number of lexicals that represent a number with decimal notation and whose lexical representation is thereby in the lexical space of <code>xsd:decimal</code>, <code>xsd:float</code>, and <code>xsd:double</code>.</li> <li><strong>ValidExponentialNotation</strong>: The number of lexicals that represent a number with exponential notation and whose lexical representation is thereby in the lexical space of <code>xsd:float</code>, and <code>xsd:double</code>.</li> <li><strong>ValidInfOrNaNNotation</strong>: The number of lexicals that equals either <code>INF</code>, <code>+INF</code>, <code>-INF</code> or <code>NaN</code> and whose lexical representation is thereby in the lexical space of <code>xsd:float</code>, and <code>xsd:double</code>.</li> <li><strong>ValidIntegerNotation</strong>: The number of lexicals that represent an integer number and whose lexical representation is thereby in the lexical space of <code>xsd:integer</code>, <code>xsd:decimal</code>, <code>xsd:float</code>, and <code>xsd:double</code>.</li> <li><strong>ValidTimeNotation</strong>: The number of lexicals that are in the lexical space of <code>xsd:time</code>.</li> <li><strong>ValidTrueOrFalseNotation</strong>: The number of lexicals that equal either <code>true</code> or <code>false</code> and whose lexical representation is thereby in the lexical space of <code>xsd:boolean</code>.</li> <li><strong>ValidZeroOrOneNotation</strong>: The number of lexicals that equal either <code>0</code> or <code>1</code> and whose lexical representation is thereby in the lexical space of <code>xsd:boolean</code>, and <code>xsd:integer</code>, <code>xsd:decimal</code>, <code>xsd:float</code>, and <code>xsd:double</code>.</li> </ul> <strong>Note</strong>: Lexical representation of <code>xsd:double</code> values in embedded JSON-LD got normalized to always use exponential notation with up to 16 fractional digits (see <a href="https://github.com/jsonld-java/jsonld-java/blob/v0.13.1/core/src/main/java/com/github/jsonldjava/core/RDFDataset.java#L648">related code</a>). Be careful by drawing conclusions from according <strong>Valid…</strong> and <strong>Unprecise…</strong> measures.</li> <li>PROPERTY: The property that has been measured.</li> <li>DATATYPE: The datatype that has been measured.</li> <li>QUANTITY: The count of statements that fulfill the condition specified by the measurement per file, property and datatype.</li> </ul> </li> </ul> <p><strong>Preview</strong></p> <pre><code>"CATEGORY","FILE_URL","MEASUREMENT","PROPERTY","DATATYPE","QUANTITY" "html-rdfa","http://data.dws.informatik.uni-mannheim.de/structureddata/2021-12/quads/dpef.html-rdfa.nq-00000.gz","UnpreciseRepresentableInDouble","https://www.w3.org/2006/vcard/ns#longitude","https://www.w3.org/2001/XMLSchema#float","1" "html-rdfa","http://data.dws.informatik.uni-mannheim.de/structureddata/2021-12/quads/dpef.html-rdfa.nq-00000.gz","UnpreciseRepresentableInDouble","https://www.w3.org/2006/vcard/ns#latitude","https://www.w3.org/2001/XMLSchema#float","1" "html-rdfa","http://data.dws.informatik.uni-mannheim.de/structureddata/2021-12/quads/dpef.html-rdfa.nq-00000.gz","UnpreciseRepresentableInDouble","https://purl.org/goodrelations/v1#hasCurrencyValue","https://www.w3.org/2001/XMLSchema#float","6" … "html-embedded-jsonld","http://data.dws.informatik.uni-mannheim.de/structureddata/2021-12/quads/dpef.html-embedded-jsonld.nq-06239.gz","ValidZeroOrOneNotation","http://schema.org/ratingValue","http://www.w3.org/2001/XMLSchema#integer","96" "html-embedded-jsonld","http://data.dws.informatik.uni-mannheim.de/structureddata/2021-12/quads/dpef.html-embedded-jsonld.nq-06239.gz","ValidZeroOrOneNotation","http://schema.org/minValue","http://www.w3.org/2001/XMLSchema#integer","164" "html-embedded-jsonld","http://data.dws.informatik.uni-mannheim.de/structureddata/2021-12/quads/dpef.html-embedded-jsonld.nq-06239.gz","ValidZeroOrOneNotation","http://schema.org/width","http://www.w3.org/2001/XMLSchema#integer","361"</code></pre> <p><strong>Note</strong>: The data contain malformed IRIs, like "<code>xsd:dateTime</code>" (instead of probably "<code>http://www.w3.org/2001/XMLSchema#dateTime</code>"), which are caused by missing namespace definitions in the original source website.</p> <p><strong>Reproduce</strong></p> <p>To reproduce this dataset checkout the <a href="https://doi.org/10.5281/zenodo.6337650">RDF Property and Datatype Usage Scanner v2.1.0</a> and execute:</p> <pre><code class="language-bash">mvn clean package java -jar target/Scanner.jar --category html-rdfa --list http://webdatacommons.org/structureddata/2021-12/files/html-rdfa.list October2021 java -jar target/Scanner.jar --category html-embedded-jsonld --list http://webdatacommons.org/structureddata/2021-12/files/html-embedded-jsonld.list October2021 ./measure.sh October2021 # Wait until the scan has completed. This will take a few days java -jar target/Scanner.jar --results ./October2021/measurements.csv.gz October2021 </code></pre>
Web Data Commons (November 2019) Property and Datatype Usage Dataset
<p>This is a dataset about the usage of properties and datatypes in the <a href="http://webdatacommons.org/structureddata/2019-12/stats/stats.html">Web Data Commons RDFa, Microdata, Embedded JSON-LD, and Microformats Data Sets (November 2019)</a> based on the <a href="https://commoncrawl.org/2019/11/november-2019-crawl-archive-now-available/">Common Crawl November 2019 archive</a>. The dataset has been produced using the <a href="https://doi.org/10.5281/zenodo.6338129">RDF Property and Datatype Usage Scanner v2.1.1</a>, which is based on the <a href="https://jena.apache.org/">Apache Jena</a> framework. Only RDFa and embedded JSON-LD data were considered, as Microdata and Microformats do not incorporate explicit datatypes.</p> <p><strong>Dataset Properties</strong></p> <ul> <li><strong>Size</strong>: 37.0 MiB compressed, 785.7 MiB uncompressed, 3 542 700 rows plus 1 head line determined using <code class="language-bash">gunzip -c measurements.csv.gz | wc -l</code></li> <li><strong>Parsing Failures</strong>: The scanner failed to parse 5 080 473 triples (~0.053 %) of the source dataset (containing 9 547 365 107 triples).</li> <li><strong>Content</strong>: <ul> <li>CATEGORY: The category (<em>html-embedded-jsonld</em> or <em>html-rdfa</em>) of the Web Data Commons file that has been measured.</li> <li>FILE_URL: The URL of the Web Data Commons file that has been measured.</li> <li>MEASUREMENT: The applied measurement with specific conditions, one of: <ul> <li><strong>UnpreciseRepresentableInDouble</strong>: The number of lexicals that are in the lexical space but not in the value space of <code>xsd:double</code>.</li> <li><strong>UnpreciseRepresentableInFloat</strong>: The number of lexicals that are in the lexical space but not in the value space of <code>xsd:float</code>.</li> <li><strong>UsedAsDatatype</strong>: The total number of literals with the datatype.</li> <li><strong>UsedAsPropertyRange</strong>: The number of statements that specify the datatype as range of the property.</li> <li><strong>ValidDateNotation</strong>: The number of lexicals that are in the lexical space of <code>xsd:date</code>.</li> <li><strong>ValidDateTimeNotation</strong>: The number of lexicals that are in the lexical space of <code>xsd:dateTime</code>.</li> <li><strong>ValidDecimalNotation</strong>: The number of lexicals that represent a number with decimal notation and whose lexical representation is thereby in the lexical space of <code>xsd:decimal</code>, <code>xsd:float</code>, and <code>xsd:double</code>.</li> <li><strong>ValidExponentialNotation</strong>: The number of lexicals that represent a number with exponential notation and whose lexical representation is thereby in the lexical space of <code>xsd:float</code>, and <code>xsd:double</code>.</li> <li><strong>ValidInfOrNaNNotation</strong>: The number of lexicals that equals either <code>INF</code>, <code>+INF</code>, <code>-INF</code> or <code>NaN</code> and whose lexical representation is thereby in the lexical space of <code>xsd:float</code>, and <code>xsd:double</code>.</li> <li><strong>ValidIntegerNotation</strong>: The number of lexicals that represent an integer number and whose lexical representation is thereby in the lexical space of <code>xsd:integer</code>, <code>xsd:decimal</code>, <code>xsd:float</code>, and <code>xsd:double</code>.</li> <li><strong>ValidTimeNotation</strong>: The number of lexicals that are in the lexical space of <code>xsd:time</code>.</li> <li><strong>ValidTrueOrFalseNotation</strong>: The number of lexicals that equal either <code>true</code> or <code>false</code> and whose lexical representation is thereby in the lexical space of <code>xsd:boolean</code>.</li> <li><strong>ValidZeroOrOneNotation</strong>: The number of lexicals that equal either <code>0</code> or <code>1</code> and whose lexical representation is thereby in the lexical space of <code>xsd:boolean</code>, and <code>xsd:integer</code>, <code>xsd:decimal</code>, <code>xsd:float</code>, and <code>xsd:double</code>.</li> </ul> <strong>Note</strong>: Lexical representation of <code>xsd:double</code> values in embedded JSON-LD got normalized to always use exponential notation with up to 16 fractional digits (see <a href="https://github.com/jsonld-java/jsonld-java/blob/v0.13.1/core/src/main/java/com/github/jsonldjava/core/RDFDataset.java#L648">related code</a>). Be careful by drawing conclusions from according <strong>Valid…</strong> and <strong>Unprecise…</strong> measures.</li> <li>PROPERTY: The property that has been measured.</li> <li>DATATYPE: The datatype that has been measured.</li> <li>QUANTITY: The count of statements that fulfill the condition specified by the measurement per file, property and datatype.</li> </ul> </li> </ul> <p><strong>Preview</strong></p> <pre><code>"CATEGORY","FILE_URL","MEASUREMENT","PROPERTY","DATATYPE","QUANTITY" "html-rdfa","http://data.dws.informatik.uni-mannheim.de/structureddata/2019-12/quads/dpef.html-rdfa.nq-00000.gz","UnpreciseRepresentableInDouble","https://www.w3.org/2006/vcard/ns#longitude","https://www.w3.org/2001/XMLSchema#float","1" "html-rdfa","http://data.dws.informatik.uni-mannheim.de/structureddata/2019-12/quads/dpef.html-rdfa.nq-00000.gz","UnpreciseRepresentableInDouble","https://www.w3.org/2006/vcard/ns#latitude","https://www.w3.org/2001/XMLSchema#float","1" "html-rdfa","http://data.dws.informatik.uni-mannheim.de/structureddata/2019-12/quads/dpef.html-rdfa.nq-00000.gz","UnpreciseRepresentableInDouble","http://purl.org/goodrelations/v1#hasCurrencyValue","http://www.w3.org/2001/XMLSchema#floatfloat","10" … "html-embedded-jsonld","http://data.dws.informatik.uni-mannheim.de/structureddata/2019-12/quads/dpef.html-embedded-jsonld.nq-01426.gz","ValidZeroOrOneNotation","http://schema.org/ratingValue","http://www.w3.org/2001/XMLSchema#integer","109" "html-embedded-jsonld","http://data.dws.informatik.uni-mannheim.de/structureddata/2019-12/quads/dpef.html-embedded-jsonld.nq-01426.gz","ValidZeroOrOneNotation","http://schema.org/width","http://www.w3.org/2001/XMLSchema#integer","60" "html-embedded-jsonld","http://data.dws.informatik.uni-mannheim.de/structureddata/2019-12/quads/dpef.html-embedded-jsonld.nq-01426.gz","ValidZeroOrOneNotation","http://schema.org/minValue","http://www.w3.org/2001/XMLSchema#integer","68"</code></pre> <p><strong>Note</strong>: The data contain malformed IRIs, like "<code>xsd:dateTime</code>" (instead of probably "<code>http://www.w3.org/2001/XMLSchema#dateTime</code>"), which are caused by missing namespace definitions in the original source website.</p> <p><strong>Reproduce</strong></p> <p>To reproduce this dataset checkout the <a href="https://doi.org/10.5281/zenodo.6337650">RDF Property and Datatype Usage Scanner v2.1.0</a> and execute:</p> <pre><code class="language-bash">mvn clean package java -jar target/Scanner.jar --category html-rdfa --list http://webdatacommons.org/structureddata/2019-12/files/html-rdfa.list November2019 java -jar target/Scanner.jar --category html-embedded-jsonld --list http://webdatacommons.org/structureddata/2019-12/files/html-embedded-jsonld.list November2019 ./measure.sh November2019 # Wait until the scan has completed. This will take a few days java -jar target/Scanner.jar --results ./November2019/measurements.csv.gz November2019 </code></pre>
Web Data Commons (November 2018) Property and Datatype Usage Dataset
<p>This is a dataset about the usage of properties and datatypes in the <a href="http://webdatacommons.org/structureddata/2018-12/stats/stats.html">Web Data Commons RDFa, Microdata, Embedded JSON-LD, and Microformats Data Sets (November 2018)</a> based on the <a href="https://commoncrawl.org/2018/11/november-2018-crawl-archive-now-available/">Common Crawl November 2018 archive</a>. The dataset has been produced using the <a href="https://doi.org/10.5281/zenodo.6338129">RDF Property and Datatype Usage Scanner v2.1.1</a>, which is based on the <a href="https://jena.apache.org/">Apache Jena</a> framework. Only RDFa and embedded JSON-LD data were considered, as Microdata and Microformats do not incorporate explicit datatypes.</p> <p><strong>Dataset Properties</strong></p> <ul> <li><strong>Size</strong>: 22.2 MiB compressed, 569.6 MiB uncompressed, 2 608 325 rows plus 1 head line determined using <code class="language-bash">gunzip -c measurements.csv.gz | wc -l</code></li> <li><strong>Parsing Failures</strong>: The scanner failed to parse 4 135 842 triples (~0.077 %) of the source dataset (containing 5 367 569 192 triples).</li> <li><strong>Content</strong>: <ul> <li>CATEGORY: The category (<em>html-embedded-jsonld</em> or <em>html-rdfa</em>) of the Web Data Commons file that has been measured.</li> <li>FILE_URL: The URL of the Web Data Commons file that has been measured.</li> <li>MEASUREMENT: The applied measurement with specific conditions, one of: <ul> <li><strong>UnpreciseRepresentableInDouble</strong>: The number of lexicals that are in the lexical space but not in the value space of <code>xsd:double</code>.</li> <li><strong>UnpreciseRepresentableInFloat</strong>: The number of lexicals that are in the lexical space but not in the value space of <code>xsd:float</code>.</li> <li><strong>UsedAsDatatype</strong>: The total number of literals with the datatype.</li> <li><strong>UsedAsPropertyRange</strong>: The number of statements that specify the datatype as range of the property.</li> <li><strong>ValidDateNotation</strong>: The number of lexicals that are in the lexical space of <code>xsd:date</code>.</li> <li><strong>ValidDateTimeNotation</strong>: The number of lexicals that are in the lexical space of <code>xsd:dateTime</code>.</li> <li><strong>ValidDecimalNotation</strong>: The number of lexicals that represent a number with decimal notation and whose lexical representation is thereby in the lexical space of <code>xsd:decimal</code>, <code>xsd:float</code>, and <code>xsd:double</code>.</li> <li><strong>ValidExponentialNotation</strong>: The number of lexicals that represent a number with exponential notation and whose lexical representation is thereby in the lexical space of <code>xsd:float</code>, and <code>xsd:double</code>.</li> <li><strong>ValidInfOrNaNNotation</strong>: The number of lexicals that equals either <code>INF</code>, <code>+INF</code>, <code>-INF</code> or <code>NaN</code> and whose lexical representation is thereby in the lexical space of <code>xsd:float</code>, and <code>xsd:double</code>.</li> <li><strong>ValidIntegerNotation</strong>: The number of lexicals that represent an integer number and whose lexical representation is thereby in the lexical space of <code>xsd:integer</code>, <code>xsd:decimal</code>, <code>xsd:float</code>, and <code>xsd:double</code>.</li> <li><strong>ValidTimeNotation</strong>: The number of lexicals that are in the lexical space of <code>xsd:time</code>.</li> <li><strong>ValidTrueOrFalseNotation</strong>: The number of lexicals that equal either <code>true</code> or <code>false</code> and whose lexical representation is thereby in the lexical space of <code>xsd:boolean</code>.</li> <li><strong>ValidZeroOrOneNotation</strong>: The number of lexicals that equal either <code>0</code> or <code>1</code> and whose lexical representation is thereby in the lexical space of <code>xsd:boolean</code>, and <code>xsd:integer</code>, <code>xsd:decimal</code>, <code>xsd:float</code>, and <code>xsd:double</code>.</li> </ul> <strong>Note</strong>: Lexical representation of <code>xsd:double</code> values in embedded JSON-LD got normalized to always use exponential notation with up to 16 fractional digits (see <a href="https://github.com/jsonld-java/jsonld-java/blob/v0.13.1/core/src/main/java/com/github/jsonldjava/core/RDFDataset.java#L648">related code</a>). Be careful by drawing conclusions from according <strong>Valid…</strong> and <strong>Unprecise…</strong> measures.</li> <li>PROPERTY: The property that has been measured.</li> <li>DATATYPE: The datatype that has been measured.</li> <li>QUANTITY: The count of statements that fulfill the condition specified by the measurement per file, property and datatype.</li> </ul> </li> </ul> <p><strong>Preview</strong></p> <pre><code>"CATEGORY","FILE_URL","MEASUREMENT","PROPERTY","DATATYPE","QUANTITY" "html-rdfa","http://data.dws.informatik.uni-mannheim.de/structureddata/2018-12/quads/dpef.html-rdfa.nq-00000.gz","UnpreciseRepresentableInDouble","https://www.w3.org/2006/vcard/ns#longitude","https://www.w3.org/2001/XMLSchema#float","4" "html-rdfa","http://data.dws.informatik.uni-mannheim.de/structureddata/2018-12/quads/dpef.html-rdfa.nq-00000.gz","UnpreciseRepresentableInDouble","https://www.w3.org/2006/vcard/ns#latitude","https://www.w3.org/2001/XMLSchema#float","4" "html-rdfa","http://data.dws.informatik.uni-mannheim.de/structureddata/2018-12/quads/dpef.html-rdfa.nq-00000.gz","UnpreciseRepresentableInDouble","https://purl.org/goodrelations/v1#hasCurrencyValue","https://www.w3.org/2001/XMLSchema#float","6" "html-rdfa","http://data.dws.informatik.uni-mannheim.de/structureddata/2018-12/quads/dpef.html-rdfa.nq-00000.gz","UnpreciseRepresentableInDouble","http://purl.org/goodrelations/v1#hasCurrencyValue","http://www.w3.org/2001/XMLSchema#floatfloat","8" "html-rdfa","http://data.dws.informatik.uni-mannheim.de/structureddata/2018-12/quads/dpef.html-rdfa.nq-00000.gz","UnpreciseRepresentableInDouble","https://opengraphprotocol.org/schema/latitude","http://www.w3.org/2001/XMLSchema#string","30" … "html-embedded-jsonld","http://data.dws.informatik.uni-mannheim.de/structureddata/2018-12/quads/dpef.html-embedded-jsonld.nq-00734.gz","ValidZeroOrOneNotation","http://schema.org/numberOfItems","http://www.w3.org/2001/XMLSchema#integer","40" "html-embedded-jsonld","http://data.dws.informatik.uni-mannheim.de/structureddata/2018-12/quads/dpef.html-embedded-jsonld.nq-00734.gz","ValidZeroOrOneNotation","http://schema.org/ratingValue","http://www.w3.org/2001/XMLSchema#integer","431" "html-embedded-jsonld","http://data.dws.informatik.uni-mannheim.de/structureddata/2018-12/quads/dpef.html-embedded-jsonld.nq-00734.gz","ValidZeroOrOneNotation","http://schema.org/width","http://www.w3.org/2001/XMLSchema#integer","122" "html-embedded-jsonld","http://data.dws.informatik.uni-mannheim.de/structureddata/2018-12/quads/dpef.html-embedded-jsonld.nq-00734.gz","ValidZeroOrOneNotation","http://schema.org/minValue","http://www.w3.org/2001/XMLSchema#integer","63" "html-embedded-jsonld","http://data.dws.informatik.uni-mannheim.de/structureddata/2018-12/quads/dpef.html-embedded-jsonld.nq-00734.gz","ValidZeroOrOneNotation","http://schema.org/pageEnd","http://www.w3.org/2001/XMLSchema#integer","139" </code></pre> <p><strong>Note</strong>: The data contain malformed IRIs, like "<code>xsd:dateTime</code>" (instead of probably "<code>http://www.w3.org/2001/XMLSchema#dateTime</code>"), which are caused by missing namespace definitions in the original source website.</p> <p><strong>Reproduce</strong></p> <p>To reproduce this dataset checkout the <a href="https://doi.org/10.5281/zenodo.6338129">RDF Property and Datatype Usage Scanner v2.1.1</a> and execute:</p> <pre><code class="language-bash">mvn clean package java -jar target/Scanner.jar --category html-rdfa --list http://webdatacommons.org/structureddata/2018-12/files/html-rdfa.list November2018 java -jar target/Scanner.jar --category html-embedded-jsonld --list http://webdatacommons.org/structureddata/2018-12/files/html-embedded-jsonld.list November2018 ./measure.sh November2018 # Wait until the scan has completed. This will take a few days java -jar target/Scanner.jar --results ./November2018/measurements.csv.gz November2018 </code></pre>
Web Data Commons (November 2017) Property and Datatype Usage Dataset
<p>This is a dataset about the usage of properties and datatypes in the <a href="http://webdatacommons.org/structureddata/2017-12/stats/stats.html">Web Data Commons RDFa, Microdata, Embedded JSON-LD, and Microformats Data Sets (November 2017)</a> based on the <a href="https://commoncrawl.org/2017/11/november-2017-crawl-archive-now-available/">Common Crawl November 2017 archive</a>. The dataset has been produced using the <a href="https://doi.org/10.5281/zenodo.6338129">RDF Property and Datatype Usage Scanner v2.1.1</a>, which is based on the <a href="https://jena.apache.org/">Apache Jena</a> framework. Only RDFa and embedded JSON-LD data were considered, as Microdata and Microformats do not incorporate explicit datatypes.</p> <p><strong>Dataset Properties</strong></p> <ul> <li><strong>Size</strong>: 16.2 MiB compressed, 327.9 MiB uncompressed, 1 509 385 rows plus 1 head line determined using <code class="language-bash">gunzip -c measurements.csv.gz | wc -l</code></li> <li><strong>Parsing Failures</strong>: The scanner failed to parse 6 024 240<br> triples (~0.11 %) of the source dataset (containing 5 252 606 731 triples).</li> <li><strong>Content</strong>: <ul> <li>CATEGORY: The category (<em>html-embedded-jsonld</em> or <em>html-rdfa</em>) of the Web Data Commons file that has been measured.</li> <li>FILE_URL: The URL of the Web Data Commons file that has been measured.</li> <li>MEASUREMENT: The applied measurement with specific conditions, one of: <ul> <li><strong>UnpreciseRepresentableInDouble</strong>: The number of lexicals that are in the lexical space but not in the value space of <code>xsd:double</code>.</li> <li><strong>UnpreciseRepresentableInFloat</strong>: The number of lexicals that are in the lexical space but not in the value space of <code>xsd:float</code>.</li> <li><strong>UsedAsDatatype</strong>: The total number of literals with the datatype.</li> <li><strong>UsedAsPropertyRange</strong>: The number of statements that specify the datatype as range of the property.</li> <li><strong>ValidDateNotation</strong>: The number of lexicals that are in the lexical space of <code>xsd:date</code>.</li> <li><strong>ValidDateTimeNotation</strong>: The number of lexicals that are in the lexical space of <code>xsd:dateTime</code>.</li> <li><strong>ValidDecimalNotation</strong>: The number of lexicals that represent a number with decimal notation and whose lexical representation is thereby in the lexical space of <code>xsd:decimal</code>, <code>xsd:float</code>, and <code>xsd:double</code>.</li> <li><strong>ValidExponentialNotation</strong>: The number of lexicals that represent a number with exponential notation and whose lexical representation is thereby in the lexical space of <code>xsd:float</code>, and <code>xsd:double</code>.</li> <li><strong>ValidInfOrNaNNotation</strong>: The number of lexicals that equals either <code>INF</code>, <code>+INF</code>, <code>-INF</code> or <code>NaN</code> and whose lexical representation is thereby in the lexical space of <code>xsd:float</code>, and <code>xsd:double</code>.</li> <li><strong>ValidIntegerNotation</strong>: The number of lexicals that represent an integer number and whose lexical representation is thereby in the lexical space of <code>xsd:integer</code>, <code>xsd:decimal</code>, <code>xsd:float</code>, and <code>xsd:double</code>.</li> <li><strong>ValidTimeNotation</strong>: The number of lexicals that are in the lexical space of <code>xsd:time</code>.</li> <li><strong>ValidTrueOrFalseNotation</strong>: The number of lexicals that equal either <code>true</code> or <code>false</code> and whose lexical representation is thereby in the lexical space of <code>xsd:boolean</code>.</li> <li><strong>ValidZeroOrOneNotation</strong>: The number of lexicals that equal either <code>0</code> or <code>1</code> and whose lexical representation is thereby in the lexical space of <code>xsd:boolean</code>, and <code>xsd:integer</code>, <code>xsd:decimal</code>, <code>xsd:float</code>, and <code>xsd:double</code>.</li> </ul> <strong>Note</strong>: Lexical representation of <code>xsd:double</code> values in embedded JSON-LD got normalized to always use exponential notation with up to 16 fractional digits (see <a href="https://github.com/jsonld-java/jsonld-java/blob/v0.13.1/core/src/main/java/com/github/jsonldjava/core/RDFDataset.java#L648">related code</a>). Be careful by drawing conclusions from according <strong>Valid…</strong> and <strong>Unprecise…</strong> measures.</li> <li>PROPERTY: The property that has been measured.</li> <li>DATATYPE: The datatype that has been measured.</li> <li>QUANTITY: The count of statements that fulfill the condition specified by the measurement per file, property and datatype.</li> </ul> </li> </ul> <p><strong>Preview</strong></p> <pre><code>"CATEGORY","FILE_URL","MEASUREMENT","PROPERTY","DATATYPE","QUANTITY" "html-rdfa","http://data.dws.informatik.uni-mannheim.de/structureddata/2017-12/quads/dpef.html-rdfa.nq-00000.gz","UnpreciseRepresentableInDouble","http://search.yahoo.com/searchmonkey/product/identifier","http://search.yahoo.com/searchmonkey-datatype/use/sku","5" "html-rdfa","http://data.dws.informatik.uni-mannheim.de/structureddata/2017-12/quads/dpef.html-rdfa.nq-00000.gz","UnpreciseRepresentableInDouble","http://purl.org/dc/elements/1.1/title","http://www.w3.org/2001/XMLSchema#string","1" "html-rdfa","http://data.dws.informatik.uni-mannheim.de/structureddata/2017-12/quads/dpef.html-rdfa.nq-00000.gz","UnpreciseRepresentableInDouble","http://opengraphprotocol.org/schema/longitude","http://www.w3.org/2001/XMLSchema#string","2290" "html-rdfa","http://data.dws.informatik.uni-mannheim.de/structureddata/2017-12/quads/dpef.html-rdfa.nq-00000.gz","UnpreciseRepresentableInDouble","http://dbpedia.org/ontology/Work/runtime","http://www.w3.org/2001/XMLSchema#string","2" "html-rdfa","http://data.dws.informatik.uni-mannheim.de/structureddata/2017-12/quads/dpef.html-rdfa.nq-00000.gz","UnpreciseRepresentableInDouble","https://schema.org/number","http://www.w3.org/2001/XMLSchema#string","1" […] "html-embedded-jsonld","http://data.dws.informatik.uni-mannheim.de/structureddata/2017-12/quads/dpef.html-embedded-jsonld.nq-00609.gz","ValidZeroOrOneNotation","http://schema.org/worstRating","http://www.w3.org/2001/XMLSchema#integer","38" "html-embedded-jsonld","http://data.dws.informatik.uni-mannheim.de/structureddata/2017-12/quads/dpef.html-embedded-jsonld.nq-00609.gz","ValidZeroOrOneNotation","http://schema.org/price","http://www.w3.org/2001/XMLSchema#integer","1" "html-embedded-jsonld","http://data.dws.informatik.uni-mannheim.de/structureddata/2017-12/quads/dpef.html-embedded-jsonld.nq-00609.gz","ValidZeroOrOneNotation","http://schema.org/ratingValue","http://www.w3.org/2001/XMLSchema#integer","3" "html-embedded-jsonld","http://data.dws.informatik.uni-mannheim.de/structureddata/2017-12/quads/dpef.html-embedded-jsonld.nq-00609.gz","ValidZeroOrOneNotation","http://schema.org/width","http://www.w3.org/2001/XMLSchema#integer","1" "html-embedded-jsonld","http://data.dws.informatik.uni-mannheim.de/structureddata/2017-12/quads/dpef.html-embedded-jsonld.nq-00609.gz","ValidZeroOrOneNotation","http://schema.org/pageEnd","http://www.w3.org/2001/XMLSchema#integer","4" </code></pre> <p><strong>Note</strong>: The data contain malformed IRIs, like "<code>xsd:dateTime</code>" (instead of probably "<code>http://www.w3.org/2001/XMLSchema#dateTime</code>"), which are caused by missing namespace definitions in the original source website.</p> <p><strong>Reproduce</strong></p> <p>To reproduce this dataset checkout the <a href="https://doi.org/10.5281/zenodo.6338129">RDF Property and Datatype Usage Scanner v2.1.1</a> and execute:</p> <pre><code class="language-bash">mvn clean package java -jar target/Scanner.jar --category html-rdfa --list http://webdatacommons.org/structureddata/2017-12/files/rdfa.list November2017 java -jar target/Scanner.jar --category html-embedded-jsonld --list http://webdatacommons.org/structureddata/2017-12/files/html-embedded-jsonld.list November2017 ./measure.sh November2017 # Wait until the scan has completed. This will take a few days java -jar target/Scanner.jar --results ./November2017/measurements.csv.gz November2017 </code></pre>
Study-Data: Longitudinal Study about the relationship between computer mouse usage and emotional states
<p>This Dataset contains the raw data files of the longitudinal study about the relationship between computer mouse usage and emotional states. The files are gzipped json files.</p> <p>There are 3 separate data files.</p> <ol> <li>The self-directed mouse usage data recorded during a 5 minute interval of regular computer use (FreeMouse_dataset)</li> <li>The mouse usage data during the point-and-click task (MouseTask_dataset)</li> <li>The sociodemographics of the dataset (sociodem_dataset)</li> </ol> <p>Note that the sociodemographic data is also included in the FreeMouse dataset as well as in the MouseTask dataset.</p> <p>For any questions about the dataset, contact: paul.freihaut@psychologie.uni-freiburg.de</p>
Web Data Commons (October 2016) Property and Datatype Usage Dataset
<p>This is a dataset about the usage of properties and datatypes in the <a href="http://webdatacommons.org/structureddata/2016-10/stats/stats.html">Web Data Commons RDFa, Microdata, Embedded JSON-LD, and Microformats Data Sets (October 2016)</a> based on the <a href="https://commoncrawl.org/2016/11/october-2016-crawl-archive-now-available/">Common Crawl October 2016 archive</a>. The dataset has been produced using the <a href="https://doi.org/10.5281/zenodo.6338129">RDF Property and Datatype Usage Scanner v2.1.1</a>, which is based on the <a href="https://jena.apache.org/">Apache Jena</a> framework. Only RDFa and embedded JSON-LD data were considered, as Microdata and Microformats do not incorporate explicit datatypes.</p> <p><strong>Dataset Properties</strong></p> <ul> <li><strong>Size</strong>: 17.4 MiB compressed, 351.1 MiB uncompressed, 1 612 479 rows plus 1 head line determined using <code class="language-bash">gunzip -c measurements.csv.gz | wc -l</code></li> <li><strong>Parsing Failures</strong>: The scanner failed to parse 28 326 152 triples (~0.69 %) of the source dataset (containing 4 097 655 302 triples).</li> <li><strong>Content</strong>: <ul> <li>CATEGORY: The category (<em>html-embedded-jsonld</em> or <em>html-rdfa</em>) of the Web Data Commons file that has been measured.</li> <li>FILE_URL: The URL of the Web Data Commons file that has been measured.</li> <li>MEASUREMENT: The applied measurement with specific conditions, one of: <ul> <li><strong>UnpreciseRepresentableInDouble</strong>: The number of lexicals that are in the lexical space but not in the value space of <code>xsd:double</code>.</li> <li><strong>UnpreciseRepresentableInFloat</strong>: The number of lexicals that are in the lexical space but not in the value space of <code>xsd:float</code>.</li> <li><strong>UsedAsDatatype</strong>: The total number of literals with the datatype.</li> <li><strong>UsedAsPropertyRange</strong>: The number of statements that specify the datatype as range of the property.</li> <li><strong>ValidDateNotation</strong>: The number of lexicals that are in the lexical space of <code>xsd:date</code>.</li> <li><strong>ValidDateTimeNotation</strong>: The number of lexicals that are in the lexical space of <code>xsd:dateTime</code>.</li> <li><strong>ValidDecimalNotation</strong>: The number of lexicals that represent a number with decimal notation and whose lexical representation is thereby in the lexical space of <code>xsd:decimal</code>, <code>xsd:float</code>, and <code>xsd:double</code>.</li> <li><strong>ValidExponentialNotation</strong>: The number of lexicals that represent a number with exponential notation and whose lexical representation is thereby in the lexical space of <code>xsd:float</code>, and <code>xsd:double</code>.</li> <li><strong>ValidInfOrNaNNotation</strong>: The number of lexicals that equals either <code>INF</code>, <code>+INF</code>, <code>-INF</code> or <code>NaN</code> and whose lexical representation is thereby in the lexical space of <code>xsd:float</code>, and <code>xsd:double</code>.</li> <li><strong>ValidIntegerNotation</strong>: The number of lexicals that represent an integer number and whose lexical representation is thereby in the lexical space of <code>xsd:integer</code>, <code>xsd:decimal</code>, <code>xsd:float</code>, and <code>xsd:double</code>.</li> <li><strong>ValidTimeNotation</strong>: The number of lexicals that are in the lexical space of <code>xsd:time</code>.</li> <li><strong>ValidTrueOrFalseNotation</strong>: The number of lexicals that equal either <code>true</code> or <code>false</code> and whose lexical representation is thereby in the lexical space of <code>xsd:boolean</code>.</li> <li><strong>ValidZeroOrOneNotation</strong>: The number of lexicals that equal either <code>0</code> or <code>1</code> and whose lexical representation is thereby in the lexical space of <code>xsd:boolean</code>, and <code>xsd:integer</code>, <code>xsd:decimal</code>, <code>xsd:float</code>, and <code>xsd:double</code>.</li> </ul> <strong>Note</strong>: Lexical representation of <code>xsd:double</code> values in embedded JSON-LD got normalized to always use exponential notation with up to 16 fractional digits (see <a href="https://github.com/jsonld-java/jsonld-java/blob/v0.13.1/core/src/main/java/com/github/jsonldjava/core/RDFDataset.java#L648">related code</a>). Be careful by drawing conclusions from according <strong>Valid…</strong> and <strong>Unprecise…</strong> measures.</li> <li>PROPERTY: The property that has been measured.</li> <li>DATATYPE: The datatype that has been measured.</li> <li>QUANTITY: The count of statements that fulfill the condition specified by the measurement per file, property and datatype.</li> </ul> </li> </ul> <p><strong>Preview</strong></p> <pre><code>"CATEGORY","FILE_URL","MEASUREMENT","PROPERTY","DATATYPE","QUANTITY" "html-rdfa","http://data.dws.informatik.uni-mannheim.de/structureddata/2016-10/quads/dpef.html-rdfa.nq-00000.gz","UnpreciseRepresentableInDouble","http://schema.org/aggregateRating","http://www.w3.org/2001/XMLSchema#string","36" "html-rdfa","http://data.dws.informatik.uni-mannheim.de/structureddata/2016-10/quads/dpef.html-rdfa.nq-00000.gz","UnpreciseRepresentableInDouble","http://opengraphprotocol.org/schema/longitude","http://www.w3.org/2001/XMLSchema#string","1137" "html-rdfa","http://data.dws.informatik.uni-mannheim.de/structureddata/2016-10/quads/dpef.html-rdfa.nq-00000.gz","UnpreciseRepresentableInDouble","http://ogp.me/ns#title","http://www.w3.org/2001/XMLSchema#string","3" "html-rdfa","http://data.dws.informatik.uni-mannheim.de/structureddata/2016-10/quads/dpef.html-rdfa.nq-00000.gz","UnpreciseRepresentableInDouble","http://ogp.me/nslongitude","http://www.w3.org/2001/XMLSchema#string","1" "html-rdfa","http://data.dws.informatik.uni-mannheim.de/structureddata/2016-10/quads/dpef.html-rdfa.nq-00000.gz","UnpreciseRepresentableInDouble","http://ogp.me/ns#latitude","http://www.w3.org/2001/XMLSchema#string","884" […] "html-embedded-jsonld","http://data.dws.informatik.uni-mannheim.de/structureddata/2016-10/quads/dpef.html-embedded-jsonld.nq-00294.gz","ValidZeroOrOneNotation","http://schema.org/minPrice","http://www.w3.org/2001/XMLSchema#integer","12" "html-embedded-jsonld","http://data.dws.informatik.uni-mannheim.de/structureddata/2016-10/quads/dpef.html-embedded-jsonld.nq-00294.gz","ValidZeroOrOneNotation","http://schema.org/highPrice","http://www.w3.org/2001/XMLSchema#integer","1" "html-embedded-jsonld","http://data.dws.informatik.uni-mannheim.de/structureddata/2016-10/quads/dpef.html-embedded-jsonld.nq-00294.gz","ValidZeroOrOneNotation","http://schema.org/numberOfItems","http://www.w3.org/2001/XMLSchema#integer","44" "html-embedded-jsonld","http://data.dws.informatik.uni-mannheim.de/structureddata/2016-10/quads/dpef.html-embedded-jsonld.nq-00294.gz","ValidZeroOrOneNotation","http://schema.org/ratingValue","http://www.w3.org/2001/XMLSchema#integer","139" "html-embedded-jsonld","http://data.dws.informatik.uni-mannheim.de/structureddata/2016-10/quads/dpef.html-embedded-jsonld.nq-00294.gz","ValidZeroOrOneNotation","http://schema.org/width","http://www.w3.org/2001/XMLSchema#integer","76" </code></pre> <p><strong>Note</strong>: The data contain malformed IRIs, like "<code>xsd:dateTime</code>" (instead of probably "<code>http://www.w3.org/2001/XMLSchema#dateTime</code>"), which are caused by missing namespace definitions in the original source website.</p> <p><strong>Reproduce</strong></p> <p>To reproduce this dataset checkout the <a href="https://doi.org/10.5281/zenodo.6338129">RDF Property and Datatype Usage Scanner v2.1.1</a> and execute:</p> <pre><code class="language-bash">mvn clean package java -jar target/Scanner.jar --category html-rdfa --list http://webdatacommons.org/structureddata/2016-10/files/rdfa.list October2016 java -jar target/Scanner.jar --category html-embedded-jsonld --list http://webdatacommons.org/structureddata/2016-10/files/html-embedded-jsonld.list October2016 ./measure.sh October2016 # Wait until the scan has completed. This will take a few days java -jar target/Scanner.jar --results ./October2016/measurements.csv.gz October2016 </code></pre>
Feature count data for Love et al. 2019 analysis for "Using equivalence class counts for fast and accurate testing of differential transcript usage" paper
<p>Feature count data for Love et al. 2019 analysis used in the "Using equivalence class counts for fast and accurate testing of differential transcript usage" paper. For reproducing the analyses and figures using the <a href="https://github.com/Oshlack/ec-dtu-paper/">ec-dtu-paper</a> code.</p> <p>Contains:</p> <ul> <li>Equivalence class count matrix for all 24 samples (using counts from Salmon)</li> <li>Salmon quantification results for all 24 samples</li> <li>Exon counts for all 24 samples using DEXSeq-count</li> </ul>
Data from: Unsupervised discovery of family specific vocal usage in the Mongolian gerbil
Open the record for dataset details and reuse information.
Data and Scripts for Looking into Pandora's Box: The Content of Sci-Hub and its Usage
<p>The data and scripts used in <em>Looking into Pandora's Box: The Content of Sci-Hub and its Usage.</em> See README.md for details.</p>
Data for a mapping study about the usage of MDE in Safety and Security Domain
<p>Data for a mapping study. Contains a listing of papers and information about their content.</p>
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