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ShareScore release 0.9.0
Dataset results
4 results for “wdsub”
GeneWiki subset created with WDSub at Biohackathon 2022
<p>Subset of Wikidata obtained using this Shape Expression: https://github.com/kg-subsetting/datasets-biohackathon2022/blob/main/GeneWiki/GeneWiki.shex</p> <p>And the wdsub tool version 0.0.28: https://github.com/weso/wdsub</p> <p>The input dump is: wikidata-20180115-all</p> <p>And the dumpformat is JSON</p>
Wikidata subset from 2018 dumps created with WDSub at Biohackathon 2022 - Turtle format
<p>Subset of Wikidata obtained using this Shape Expression: https://github.com/kg-subsetting/datasets-biohackathon2022/blob/main/GeneWiki/GeneWiki.shex</p> <p>And the wdsub tool version 0.0.28: https://github.com/weso/wdsub</p> <p>The input dump is: wikidata-20180115-all</p> <p>And the dumpformat is TURTLE</p>
GeneWiki subset created with WDSub at Biohackathon 2022 - Turtle format - Only labels en english
<p>Subset of Wikidata obtained using this Shape Expression: https://github.com/kg-subsetting/datasets-biohackathon2022/blob/main/GeneWiki/GeneWiki.shex</p> <p>And the wdsub tool version 0.0.31: https://github.com/weso/wdsub which is available at docker</p> <p>The input dump is: wikidata-20220630-all.json.gz</p> <p>And the dumpformat is Turtle/RDF</p>
Wikidata Subsets of 4 Gene Wiki Classes (wdsub)
<p>Chemical compound (Q11173), disease (Q12136), gene (Q7187), and protein (Q8054) are some of the main classes containing the Gene Wiki WikiProjects. In this repository, we put the corresponding subsets of each class. The subsets contain all instances of the four main classes (no sub-classes). All subsets are extracted from the Wikidata JSON dump of 3 January 2022 (<a href="https://t.co/vdmJc8V1v2">https://t.co/vdmJc8V1v2</a>) using wdsub (https://github.com/weso/wdsub)</p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.