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14 results for “white rot”

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zenodo28/100

Supplemental files Manuscript Intraspecies variation offers potentials to improve white rot fungi for increasing degradability of lignocellulose for ruminants

<p>Supplemental files of the manuscript "<strong> <span>Intraspecies variation offers potentials to improve white rot fungi for increasing degradability of lignocellulose for ruminants."&nbsp;</span></strong></p> <p><strong><span>Submitted to Journal of fungi.</span></strong></p>

openNov 2024View details →
geo24/100

Hallmarks of basidiomycete soft- and white-rot in wood-decay -omics data of Armillaria

GEO Series GSE149732. Armillaria ostoyae; Armillaria cepistipes. 25 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2020View details →
geo24/100

Temporal transcriptome analysis of the white-rot fungus Obba rivulosa shows expression of a constitutive set of plant cell wall degradation targeted genes during growth on solid spruce wood

GEO Series GSE99871. Obba rivulosa. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2017View details →
geo24/100

The molecular response of the white-rot fungus Dichomitus squalens to wood and non-woody biomass as examined by transcriptome and exoproteome analyses

GEO Series GSE79674. Dichomitus squalens. 16 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2017View details →
geo24/100

Delignification abilities of the white-rot fungus Polyporus brumalis explained by its oxidative enzymatic arsenal

GEO Series GSE112011. Lentinus brumalis. 11 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2018View details →
geo24/100

Hallmarks of basidiomycete soft- and white-rot in wood-decay -omics data of Armillaria [ARCE]

GEO Series GSE149725. Armillaria cepistipes. 14 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2020View details →
geo24/100

Transcriptome response of the white-rot fungus Trametes versicolor to hybrid poplar exhibiting unique lignin chemistry

GEO Series GSE286220. Trametes versicolor. 8 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2025View details →
geo24/100

Comparing gene expression timing and amplitude to delineate the unique pathways of brown and white rot wood-degrading fungi

GEO Series GSE108189. Pleurotus ostreatus; Gloeophyllum trabeum; Trametes versicolor; Rhodonia placenta. 36 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2018View details →
geo24/100

The integrative omics of white-rot fungus Pycnoporus coccineus reveals co-regulated CAZymes for orchestrated lignocellulose breakdown.

GEO Series GSE94878. Trametes coccinea. 22 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2017View details →
geo24/100

Metabolic characterization of two white-rot fungi in diverse cultivation environments reveals biotechnologically relevant biosynthetic pathways

GEO Series GSE272920. Gelatoporia subvermispora; Trametes versicolor. 24 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenFeb 2025View details →
geo24/100

Hallmarks of basidiomycete soft- and white-rot in wood-decay -omics data of Armillaria [AROC18]

GEO Series GSE149701. Armillaria ostoyae. 11 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2020View details →
geo20/100

Conserved white-rot enzymatic mechanism for wood decay in the Basidiomycota genus Pycnoporus

GEO Series GSE82486. Trametes cinnabarina; Trametes sanguinea; Trametes coccinea. 50 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenFeb 2017View details →
geo16/100

Gene expression at the transcriptional level of the white-rot fungus Lenzites gibbosa during wood degradation.

GEO Series GSE184416. Trametes gibbosa. 15 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2023View details →
geo16/100

Intracellular pathways for lignin catabolism in white-rot fungi

GEO Series GSE151629. Gelatoporia subvermispora; Trametes versicolor. 30 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2021View details →

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record