C. elegans Plate Population Counter

Estimate total worms per plate from a visual density preset or an ROI count, and classify plate density against the WormBook starvation threshold.

C. elegans StrainsWormBookClient-Side
Tool details, related tools, and citation

Try it out

Load example celegans plate counter data to see the full workflow

Plate Inputs

Estimated Population

Density
125
worms/cm²
Total worms
3,175
on plate
Plate area
25.4 cm²
60mm usable
Density category
normal
  • Routine plate density checks during stock maintenance
  • Estimating worm count for a bleach synchronization
  • Onboarding new lab members to plate scoring
  • Planning chunking and OP50 prep schedules
  • Comparing density across plates in a stock collection

Don't use for

  • For stage-specific counts (use a picking-based method)
  • For lifespan or brood size assays where individual count matters
  • For plates with strong spatial heterogeneity (use multiple ROIs and average)

C. elegans Plate Counting Methods

Visual density preset

Look at the plate under the dissecting scope and pick sparse, normal, or crowded. Fastest method, accurate to ±50% — good for routine maintenance decisions and stock chunking schedules.

Region-of-interest (ROI) count

Count worms in a defined area (typically a 1 cm2\text{cm}^{2} square drawn on the plate bottom with a marker) and multiply by the total plate area. Accurate to ±20% for evenly populated plates.

Picking-based count

For high-precision experiments (lifespan, brood size), pick worms one by one to a count-only plate. Slow but exact. Use for any experiment where worm count matters at the individual level.

WormSizer / WormLab automated count

For high-throughput labs, image analysis software counts worms from plate scans. The accuracy is comparable to ROI counts but lets you process hundreds of plates per day.

Managing Plate Density

Plate density management is the single biggest determinant of stock health in C. elegans labs.

Why density matters

Above ~200 worms/cm2\text{cm}^{2}, the OP50 lawn cannot keep up with metabolic demand. Worms enter starvation, which triggers dauer formation in many strains. Once a plate goes into mass dauer, the cohort is unusable for most assays and the only recovery is to chunk the few non-dauer worms and re-establish.

Standard maintenance density

Aim for ~100 worms/cm2\text{cm}^{2} as a maintenance target. This gives 2–3 days of buffer before food depletion and produces enough progeny for the next chunk.

Chunking strategy

Cut a 1 cm2\text{cm}^{2} agar block from the densest part of the plate and transfer it to a fresh seeded plate. The worms migrate onto the new lawn within hours. Repeat every 2–3 days at 20 °C for active stocks, every 5–7 days at 15 °C for slower turnover.

Frequently Asked Questions