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C. elegans Bleach Synchronization Timing Calculator.

Scale alkaline hypochlorite reagents for any number of gravid plates and predict L1 → young adult stage pickups at 15, 20, or 25 °C.

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Validated2026-04-06
CitableMethods and citation included

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Load example celegans synchronization calculator data to see the full workflow

Bleach & Stage Inputs

Each plate uses 4 mL water + 1.5 mL bleach + 0.5 mL 5N NaOH (6 mL total).

Standard rearing — Q10≈2 baseline.

If provided, the calculator returns ETAs for each stage transition.

Reagents & Timeline

Total bleach
33 mL
5 plates × 6 mL × 1.1
Target stage pickup
L4
42 h after bleach start

Reagents (with 10% overage)

ReagentVolume
Distilled water22 mL
Sodium hypochlorite (5–6% bleach)8.3 mL
5 N NaOH2.8 mL

Stage Timeline

StageHours after startETA
L1 (hatched in M9)14 h
L226 h
L334 h
L442 h
Young adult (gravid)54 h

When to use

  • Planning a bleach synchronization for any number of gravid plates
  • Scheduling L4 or young adult pickups for downstream assays
  • Setting up synchronized aging cohorts for lifespan or healthspan studies
  • Onboarding new lab members to the WormBook bleach protocol
  • Coordinating reagent prep across parallel synchronizations

Do not use for

  • For mutants with known developmental delays (use empirical timing)
  • For non-standard rearing temperatures outside 15–25 °C
  • For wild isolates that may not match N2 development rates

Make the bleach fresh every time

Chlorine activity in alkaline hypochlorite drops within minutes. Mix water + bleach + NaOH right before you add it to the worm pellet, and never store leftover solution.

Watch the dissolution under a scope

Bleach for too short and you get adult debris in your egg prep. Bleach for too long and you damage the eggshells. The right endpoint is "no intact adults visible" — usually 5–8 min.

Wash thoroughly to remove residual bleach

Three M9 washes is the minimum. Residual bleach kills L1s during the overnight hatch. If your hatching efficiency is low, add a fourth wash.

Confirm staging visually before picking

Temperature predictions are guides, not guarantees. Score 5–10 worms under the dissecting scope before committing to a large pick — vulval crescent for L4, embryos at spermatheca for gravid YA.

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Method

Reagents: per-plate volumes (4 mL water + 1.5 mL bleach + 0.5 mL 5N NaOH) ×\times plate count ×\times 1.1 overage. Stage timeline: cumulative 20 °C intervals (L1@14 h, L2@+12 h, L3@+8 h, L4@+8 h, YA@+12 h) scaled by Q10≈2 temperature factors (15 °C ×1.6, 20 °C ×1.0, 25 °C ×0.65). ETAs computed by adding scaled hours to the user-provided bleach start datetime.

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Validated

Last validated 2026-04-06. Calculations are designed for planning and documentation support; verify procurement decisions against manufacturer specifications or institutional SOPs.

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How to cite

How to Cite

ConductScience C. elegans Bleach Synchronization Timing Calculator (v0.97.0). ConductScience, Inc. 2026. Available at: https://conductscience.com/tools/celegans-synchronization-calculator

Stiernagle T. Maintenance of C. elegans. WormBook. 2006. doi/10.1895/wormbook.1.101.1

Brenner S. The genetics of Caenorhabditis elegans. Genetics. 1974;77(1):71-94.

Standard Alkaline Hypochlorite Bleach Protocol

Why bleach?

Adult C. elegans cuticles dissolve in alkaline hypochlorite within 5–8 minutes, but eggshells (chitin) survive intact. This gives you a clean cohort of eggs that hatch synchronously as L1s — the foundation of any age-matched experiment.

The recipe (per gravid 60 mm plate)
  • 4 mL distilled water
  • 1.5 mL household bleach (5–6% sodium hypochlorite)
  • 0.5 mL 5N NaOH
  • = 6 mL total alkaline hypochlorite solution

Always make this fresh — the chlorine activity drops fast once NaOH is added.

Procedure

1. Wash gravid plates into a 15 mL conical with M9 buffer 2. Spin at 1,500 ×\times g for 1 min, aspirate supernatant 3. Add 6 mL fresh bleach solution, vortex briefly 4. Watch under a scope — adults dissolve in 5–8 min, leaving eggs intact 5. Spin, aspirate, wash 3× with sterile M9 6. Resuspend in 5 mL M9 in a fresh conical and rotate overnight at 20 °C 7. Eggs hatch as starvation-arrested L1s in 12–16 hours

Picking Synchronized Stages from a Bleach

After hatching as L1 in M9, the cohort develops on OP50-seeded NGM plates with predictable timing. Use the calculator to schedule pickups.

L1 collection (food-deprivation arrest)

Keep eggs in M9 with no food for 12–16 h at 20 °C. Worms hatch and arrest at L1 — the most synchronized timepoint you can get. Plate to OP50 to release the arrest and start development.

L4 picking (the most common timepoint)

At 20 °C, L4s appear ~42 h after bleach start. The vulval crescent is unmistakable under a dissecting scope. Pick L4s for: lifespan setup, RNAi feeding plates, synchronized aging cohorts, mating crosses.

Young adult picking

At 20 °C, gravid young adults appear ~54 h after bleach start. Pick YAs before egg laying begins (no embryos in the gonad) for: brood size assays, fecundity scoring, single-worm sorting.

Temperature trade-offs
  • 15 °C: 1.6× slower, useful when you need to slow a cohort to fit your schedule
  • 20 °C: standard, baseline for all published timing
  • 25 °C: 0.65× faster, useful for quick experiments but stresses some mutants

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