Human genome assemblies enhanced by LOCLA
<p>This is a data repository for the genome assemblies of three human samples enhanced by LOCLA (DOI: 10.5281/zenodo.8280853 ). LOCLA is a novel genome assembly optimization tool, LOCLA, that iteratively improves the quality of an assembly by locating sequencing reads on partially assembled scaffolds and thus enable gap filling and further scaffolding. </p> <p>The three human genome assemblies and the assembly statistics are compressed into one single zip file. File names are explained as follows:</p> <ol> <li>LLD0021C_locla.fasta : Whole genome assembly of a Taiwanese male individual generated by LOCLA</li> <li>LLD0021C_locla_quality.txt : Assembly statistics of LLD0021C_locla.fasta</li> <li>chm13_locla.fasta : Whole genome assembly of the CHM13 cell line generated by LOCLA</li> <li>chm13_locla_quality.txt : Assembly statistics of chm13_locla.fasta</li> <li>hg002_gma_locla.fasta : Whole genome assembly of the HG002 sample generated by LOCLA </li> <li>hg002_gma_locla_quality.txt : Assembly statistics of hg002_gma_locla.fasta</li> </ol> <p> </p>
ShareScore
36/100
Overall dataset sharing score
Score breakdown
These five areas show where the dataset supports — or may limit — practical reuse.
- Stewardship
- 8
- Harmonization
- 4
- Access
- 16
- Reuse readiness
- 8
- Engagement
- 0
Topics
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