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7,883 results for “Tropic”

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dryad36/100

High-latitude marginal reefs support fewer but bigger corals than their tropical counterparts

<p><span>Anthropogenic impacts are typically detrimental to tropical coral reefs, but the effect of increasing environmental stress and variability on the size structure of coral communities remains poorly understood. This limits our ability to effectively conserve coral reef ecosystems because size-specific dynamics are rarely incorporated. Our aim is to quantify variation in the size structure of coral populations across 20 sites along a tropical-to-subtropical environmental gradient on the east coast of Australia (~23</span><span>°</span><span>S to 30</span><span>°</span><span>S), to determine how size structure changes with a gradient of sea surface temperature, turbidity, productivity and light levels. We use two approaches: 1) linear regression with summary statistics (such as median size) as response variables, a method frequently favoured by ecologists; and 2) compositional functional regression, a novel method using entire size-frequency distributions as response variables. We then predict coral population size structure with increasing environmental stress and variability. Together, we find fewer but larger coral colonies in marginal reefs, where conditions are typically more variable and stressful, than in tropical reefs.</span> <span>Our model predicts that coral populations may become gradually dominated by larger colonies (&gt; 148 cm<sup>2</sup>) with increasing environmental stress. Fewer but bigger corals suggest low survival of smaller corals, slow growth, and / or poor recruitment. This finding is concerning for the future of coral reefs, as it implies that current marginal populations, or future reefs in increasingly stressful environmental conditions may have low recovery potential. We highlight the importance of continuously monitoring changes to population structure over biogeographic scales.</span></p>

opencc-zeroAug 2023View details →
dryad36/100

Patterns of reef fish taxonomic and functional diversity in the Eastern Tropical Pacific

<p class="MsoNormal">A core challenge in ecology is identifying the factors that determine species distribution and functional diversity of species assemblages. Reef fish are the most diverse group of vertebrates, form taxonomically rich and functionally diverse communities and represent a key source of food for humans. We examine regional distribution patterns of reef fish species richness and functional diversity and investigate how these are determined by historical, biogeographic, energetic, and anthropogenic factors. We compiled data from 3,312 underwater visual censuses (UVCs) performed at 122 locations comprising rocky and coral reefs along of the Eastern Tropical Pacific (ETP). We used Generalized Linear Mixed-effects Models (GLMM) implemented in a Bayesian framework to investigate whether distance from quaternary refugia, distance from mainland, shelf area, primary productivity, sea surface temperature, human population gravity and conservation status influence reef fish species richness and functional diversity in the ETP. Species richness and functional richness (FRic) peaked towards the center of the ETP and our null model suggests that FRic followed a spatial pattern than would be predicted by species richness. Additionally, functional evenness (FEve) was highest at higher latitudes whereas functional dispersion (FDis) was homogeneous throughout the ETP. Species richness was negatively influenced by shelf area and distance from the mainland but positively influenced by sea surface temperature and conservation status. FEve was influenced by human population gravity and FDis by shelf area, respectively. Reef fish<strong> </strong>species richness and functional diversity in the ETP exhibited a strong division within the region mainly mediated by sea surface temperature and human population gravity. Our results also suggest that dominant species in large areas share more common traits than dominant species in small areas. This study provides previously unknown regional patterns of reef fish functional diversity and new insights into how historical, biogeographic, energetic, and anthropogenic factors influence complementary biodiversity facets.</p>

opencc-zeroAug 2023View details →
dryad36/100

Data from: leaf functional diversity and environmental filtering in a tropical dry forest: comparison between two geological substrates

<p><span>The role of geological substrate in shaping plant community functional diversity remains poorly understood. Considering the involvement of leaves in the energy, water and nutrient economics of plants, we hypothesized that leaves experience geology-related filtering, impacting functional attributes and functional leaf community diversity on different substrates. We studied tropical dry forest communities on limestone and siliciclastic phyllite-derived soils, comparing their functional diversity and soil physico-chemical properties. We predicted the most benign habitat (less severe filter) to be associated with higher leaf functional diversity and an acquisitive strategy prevalence, while the more stressful habitat should show conservative leaf traits and lower leaf functional diversity. We measured six traits in 31 common tree species (representing ~80% of community crown cover): leaf area, specific leaf area, leaf thickness, leaf dry matter content, petiole length, and leaf blade narrowness. Leaf functional diversity was assessed through the functional trait dispersion metric. Intraspecific functional variation was examined in 25 species shared between substrates. The limestone substrate was more fertile (higher phosphorous) with higher water retention, while phyllite had higher nitrogen and lower humidity. Principal component analysis segregated plots by substrate, with limestone plots being more clustered. Community leaf functional diversity was higher in the limestone forest. Most species examined showed inter-substrate trait differences in at least one leaf functional trait. The two substrates constituted distinct growth environments, with the more benign substrate associated to higher community functional leaf diversity. The intraspecific analysis revealed the prevalence of acquisitive traits in the more benign and more conservative traits in the more stressful habitat. This study advances our understanding of the role of geological substrate as an environmental filter in tropical dry forest, influencing leaf functional responses and emphasizing the importance of intraspecific functional variation.</span></p>

opencc-zeroAug 2023View details →
dryad36/100

Beetle evolution illuminates the geological history of the world's most diverse tropical archipelago

<p><span>The geologically-complex Indo-Australian-Melanesian archipelago (IAMA) hosts extraordinarily high levels of species richness and endemism and has long served as a natural laboratory for studying biogeography and evolution. Nonetheless, its geological history and the provenance and evolution of its biodiversity remain poorly understood. Here, we provide a geological scenario for the IAMA informed by a time-calibrated molecular phylogeny of 1,006 species of <em>Trigonopterus</em> weevils—an exceptionally diverse radiation of regionally-endemic flightless beetles. Moreover, we performed a statistical biogeographic analysis and examined timing and patterns in the accumulation of lineages residing in <em>a priori</em>-defined geographic units comprising the IAMA. We estimate that <em>Trigonopterus</em> originated in Australia during the early Paleogene. Subsequent rapid diversification in the area of the present-day Papuan Peninsula suggests the presence of proto-Papuan islands by the middle Eocene; the New Guinea North Coast Ranges were colonized in the late Eocene, followed by the New Guinea Highlands and the Bird´s Head Peninsula. We inferred the presence of terrestrial habitat in the North Moluccas and Sulawesi in the late Oligocene and the subsequent rapid colonization of Sundaland and the Lesser Sunda Islands. New Caledonia and Samoa were colonized from the Papuan Peninsula, and their faunas also diverged in the late Oligocene. These biota-informed time estimates are compatible with geological data from the region and shed new light on IAMA paleogeography, even where geological evidence has been lost to erosion. Beetle evolution thus appears to have closely tracked the geological evolution of the IAMA, revealing a uniquely well-resolved view of regional biogeography.</span><span><br></span></p>

opencc-zeroSep 2023View details →
dryad36/100

Environment differentially affects the functional and phylogenetic structures of plant communities in a dry evergreen Afromontane tropical forest

<p class="MsoNormal"><span>Testing how local environmental conditions influence plant community assembly is important to understand the underlying mechanisms that promote and/or maintain biodiversity. Functional traits are used to find the broad spectrum of resource use strategies that plants use to</span><span> respond to environmental variation</span><span>. The patterns and drivers of plant community assembly through the lens of traits and phylogeny, however, remain to be studied in a uniquely biodiversity rich but poorly known fragmented dry Afromontane forest of Ethiopia. Here, we combined trait and community phylogenetic data from thirty sampling plots of 20 × 20 m size to determine the functional and phylogenetic structures and their drivers in a fragmented, human-dominated dry evergreen Afromontane forest. We found phylogenetic and functional clustering of plants in which the effect of environment was found to be trait specific. A weak phylogenetic signal for traits was detected suggesting that species resource use strategies may not be inferred using species phylogenetic distance. Additionally, we found functional traits to be weak in predicting species abundance distribution. Overall, while this study shows a non-random community assembly pattern, it also highlights the importance of deterministic processes being trait specific. </span></p>

opencc-zeroSep 2023View details →
dryad36/100

Data from: Contrasting sap flow characteristics between pioneer and late-successional tree species in secondary tropical montane forests of Eastern Himalaya, India

Abstract The interactive role of life-history traits and environmental forcing on plant-water relations is crucial for understanding species response to climate change but remains poorly understood in secondary tropical montane forests (TMFs). Comparing contrasting life-history traits (pioneer vs late-successional species) in a biodiverse Eastern Himalayan secondary TMF, we investigated sap flow responses in co-occurring pioneer species, Symplocos racemosa (n=5) and Eurya acuminata (n=5), and late-successional species, Castanopsis hystrix (n=3), using modified Granier's Thermal Dissipation probes. The fast-growing pioneers S. racemosa and E. acuminata) had 2.1- and 1.6-times higher sap flux density than the late-successional C. hystrix, respectively, and exhibited characteristics of long-lived pioneer species. Significant radial and azimuthal variability in sap flow (V) between species was observed and attributed to life history traits and the canopy's access to sunlight. Nocturnal V (1800-0500 hr) was 13.8 % of daily V and is attributed to stem recharge for evening V (1800-2300 hr) and to endogenous stomatal controls for pre-dawn V (0000-0500 hr). Both the shallow-rooted pioneer species exhibited midday depression in V attributed to photosensitivity and diel moisture stress response. In contrast, deep-rooted C. hystrix transpired unaffected across the dry season likely accessing groundwater. Thus, the secondary broadleaved TMFs, with the dominance of shallow-rooted pioneers, are more prone to the negative impacts of drier and warmer winters than primary forests, which are dominated by deep-rooted species. The study provides an empirical understanding of life-history traits and microclimate modulating plant-water use in widely distributed secondary TMFs in Eastern Himalaya and highlights their vulnerability against warmer winters and reduced snowfall due to climate change.

opencc-zeroSep 2023View details →
dryad36/100

Phytochemical diversity impacts herbivory in a tropical rainforest tree community

<p class="p1">Metabolomics provides an unprecedented window <span class="s1">into </span>diverse plant secondary<span class="s2"> </span>metabolites that represent a potentially critical niche dimension in tropical forests<span class="s2"> </span>underlying <span class="s1">species </span>co-existence. Here, we used untargeted metabolomics to evaluate<span class="s2"> </span>chemical composition of 358 tree species and its relationship <span class="s1">with </span>phylogeny and<span class="s2"> </span>variation in light environment, soil nutrients, and insect-herbivore leaf damage in a<span class="s3"> </span><span class="s4">tropical rain forest plot. </span>We report no phylogenetic signal in most compound classes,<span class="s3"> </span>indicating rapid diversification in tree metabolomes. <span class="s4">We found that </span>locally <span class="s4">co-</span>occur<span class="s1">ring species were more </span>chemically <span class="s1">dis</span>similar than random, and that local<span class="s2"> </span>chemical dispersion and metabolite diversity <span class="s1">was associated with lower </span>herbivory,<span class="s2"> </span>especially that of specialist insect herbivores. <span class="s1">Our results highlight the role of secondary</span><span class="s3"> </span>metabolites in mediating plant-herbivore interactions and their potential to facilitate<span class="s3"> </span>niche differentiation in a manner that contributes to species coexistence. Furthermore,<span class="s3"> </span>our findings suggest that specialist herbivore pressure is an important mechanism<span class="s3"> </span>promoting phytochemical diversity in tropical forests.</p>

opencc-zeroSep 2023View details →
dryad36/100

Soundscapes and artificial intelligence provide powerful tools to track biodiversity recovery in tropical forests

<p><span>Tropical forest recovery is fundamental to addressing the intertwined climate and biodiversity loss crises.</span><span> While regenerating trees sequester carbon relatively quickly, the pace of biodiversity recovery remains contentious. </span><span>Here, we use bioacoustics and meta-barcoding to measure forest recovery post-agriculture in a global biodiversity hotspot in Ecuador</span><span>. We show that the community composition, and not species richness, of vocalizing vertebrates identified by experts reflects the restoration gradient. Two automated measures – an acoustic index model and a bird community derived from an independently developed Convolutional Neural Network – correlated well with restoration (adj-R<sup>2</sup> = 0.62 and 0.69, respectively). Importantly, both measures reflected composition of non-vocalizing nocturnal insects identified via meta-barcoding. </span><span>We show that such automated monitoring tools, </span><span>based on new technologies,</span><span> can effectively monitor the success of forest recovery, using robust and reproducible data. </span><span>Crucially, this will help ensure that forest restoration efforts result in resilient, biodiverse tropical forests and not simply 'carbon farms'.</span></p>

opencc-zeroSep 2023View details →
dryad36/100

Tropical and temperate differences in the trophic structure and aquatic prey use of riparian predators

<p>The influence of aquatic resource-inputs on terrestrial communities is poorly understood, particularly in the tropics. We used stable isotope analysis of carbon and nitrogen to trace aquatic prey use and quantify impact on trophic structure in 240 riparian arthropod communities in tropical and temperate forests. Riparian predators consumed more aquatic prey and were more trophically diverse in the tropics than temperate regions, indicating tropical riparian communities are both more reliant on, and impacted by, aquatic resources than temperate communities. This suggests they are more vulnerable to disruption of aquatic-terrestrial linkages. Although aquatic resource use declined strongly with distance from water, we observed no correlated change in trophic structure, suggesting trophic flexibility to changing resource availability within riparian predator communities in both tropical and temperate regions. Our findings highlight the importance of aquatic resources for riparian communities, especially in the tropics, but suggest distance from water is less important than resource diversity in maintaining terrestrial trophic structure.</p>

opencc-zeroSep 2023View details →
dryad36/100

Data for: Genomic signals of local adaptation across climatically heterogenous habitats in an invasive tropical fruit fly (Bactrocera tryoni)

<p class="MsoNormal"><span>Local</span> <span>adaptation</span> plays a key role in the successful establishment of pest populations in new environments by enabling them to tolerate novel biotic and abiotic conditions experienced outside their native range. However, the <span>genomic underpinnings of such adaptive responses</span> remain unclear, especially for agriculturally important pests. We investigate<span>d</span> <span>population </span>genomic signatures in the tropical/subtropical Queensland fruit fly, <em>Bactrocera tryoni</em>, which has <span>an </span>expanded range <span>encompassing</span> temperate and arid zones in Australia, <span>and</span> tropical <span>zones in the Pacific Islands</span>. Using reduced representation sequencing data from 28 populations, we detected allele frequency shifts associated with the <span>native/invasive </span>status of populations and <span>identified</span> environmental factors that <span>have likely </span>drive<span>n</span> population differentiation. We also determined that precipitation, temperature<span>,</span> and geographic variables explain allelic shifts across the distribution range of <em>B. tryoni</em>. <span>We found</span> spatial heterogeneity in signatures of local adaptation across various climatic conditions in invaded areas. Specifically, disjunct invasive populations in the tropical <span>Pacific Islands</span> and arid zones of Australia <span>were characterised by</span> multiple significantly differentiated single nucleotide polymorphisms (SNPs), some of which were associated with genes with well-understood function in environmental stress (e.g., heat and desiccation) response. However, invasive populations in southeast Australian temperate zones show<span>ed</span> higher gene flow with the native range <span>and </span>lacked a strong local <span>adaptive signal</span>. These results suggest that population connectivity with the native range has <span>differentially </span>affect<span>ed</span> <span>local adaptive patterns in different</span> invasive populations. Overall, our findings provide insights into the evolutionary underpinnings of invasion success of an important horticultural pest in climatically distinct environments.</p>

opencc-zeroSep 2023View details →
dryad36/100

Data from: Incomplete recovery of tree community composition and rare species after 120 years of tropical forest succession in Panama

<p>Determining how fully tropical forests regenerating on abandoned land recover characteristics of old-growth forests is increasingly important for understanding their role in conserving rare species and maintaining ecosystem services. Despite this, our understanding of forest structure and community composition recovery throughout succession is incomplete, as many tropical chronosequences do not extend beyond the first 50 years of succession. Here, we examined trajectories of forest recovery across eight 1-hectare plots in middle and later stages of forest succession (40 – 120 years) and five 1-hectare old-growth plots, in the Barro Colorado Nature Monument (BCNM), Panama. We first verified that forest age had a greater effect than edaphic or topographic variation on forest structure, diversity and composition and then corroborated results from smaller plots censused 20 years previously. Tree species diversity (but not species richness) and forest structure had fully recovered to old-growth levels by 40 and 90 years, respectively. However, rare species were missing, and old-growth specialists were in low abundance, in the mid- and late secondary forest plots, leading to incomplete recovery of species composition even by 120 years into succession. We also found evidence that dominance early in succession by a long-lived pioneer led to altered forest structure and delayed recovery of species diversity and composition well past a century after land abandonment. Our results illustrate the critical importance of old-growth and old secondary forests for biodiversity conservation, given that recovery of community composition may take several centuries, particularly when a long-lived pioneer dominates in early succession.</p>

opencc-zeroOct 2023View details →
dryad36/100

Selecting exceptional tropical tree species to increase long-term carbon storage

<ol> <li><span>With rising atmospheric CO<sub>2</sub> concentrations, strategies for greater carbon sequestration and long-term storage are urgently needed. Current reforestation schemes typically use fast-growing tree species with low wood density, limiting the amount of carbon stored. In most tropical forests, there are native species with relatively fast growth rates, high wood density, and low mortality rates that also achieve large adult size — 'exceptional species.'</span></li> <li> <span>We present a simulated assessment of the carbon sequestration potential using these exceptional species selected based on a given set of criteria in </span><span>assisted secondary succession in the Neotropics.</span> </li> <li> <span>In our example, our selected exceptional species could add </span><span>up to 16.2 Mg C/ha of sequestered carbon in secondary wet forests at maturity.</span> </li> <li><span><em>Synthesis and applications</em>. By increasing the representation of exceptional species in reforestation efforts, we could potentially boost long-term carbon storage in reforestation projects focused on carbon sequestration. However, our approach is not a substitute for protecting existing old primary forests and reforested lands plus reducing deforestation and emissions.</span></li> </ol>

opencc-zeroOct 2023View details →
dryad36/100

Silicon-based anti-herbivore defense in tropical tree seedlings

<p>Silicon-based defenses effectively deter insect herbivores in many cultivated and wild grass species. Furthermore, in some of these species, silicon (Si) uptake and defense can be induced by herbivory. Tropical trees also take up Si and leaf Si concentrations vary greatly across and within species. As herbivory is a major driver of seedling mortality and niche differentiation of tropical tree species, understanding anti-herbivore defenses is pivotal. Yet, whether silicon is a constitutive and inducible herbivory defense in tropical forest tree species remains unknown.</p> <p>We grew seedlings of eight tropical tree species in a full factorial experiment, including two levels of plant-available soil Si concentrations (-Si/+Si) and a simulated herbivory treatment (-H/+H). The simulated herbivory treatment was a combination of clipping and application of methyl jasmonate. We then carried out multiple-choice feeding trials, separately for each tree species, in which leaves of each treatment combination were offered to a generalist caterpillar (<em>Spodoptera frugiperda</em>). Leaf damage was assessed.</p> <p>Three species showed a significant decrease in leaf damage under high compared to low Si conditions (by up to 72%), consistent with our expectation of Si-based defenses acting in tropical tree species. In one species, leaf damage was increased by increasing soil Si and in the remaining four species, no effect of soil Si on leaf damage was observed. Opposite to our expectation of Si uptake and defense being inducible by herbivory damage, simulated herbivory increased leaf damage in two species. Furthermore, simulated herbivory reduced Si concentrations in one species.</p> <p>Our results showed that tropical tree seedlings can be better defended when growing in Si-rich compared to Si-poor soils, and that the effects of Si on plant defense vary strongly across species. Furthermore, Si-based defenses may not be inducible in tropical tree species. Overall, constitutive Si-based defense should be considered part of the vast array of anti-herbivore defenses of tropical tree species. Our finding that Si-based defenses are highly species-specific combined with the fact that herbivory is a major driver of mortality in tropical tree seedling, suggests that variation in soil Si concentrations may have pervasive consequences for regeneration and performance across tropical tree species.</p>

opencc-zeroOct 2023View details →
zenodo36/100

Supporting data 3 for "Does increasing horizontal resolution improve the simulation of intense tropical rainfall?"

<p>Selected variables from a Geophysical Fluid Dynamics Laboratory&#39;s (GFDL) global atmospheric model version 4.0 (AM4) for a horizontal resolution of ~25 km (c384). Details of the simulations are documented in a manuscript titled &quot;Does increasing horizontal resolution improve the simulation of intense tropical rainfall?&quot; to be submitted to the Geophysical Research letters.</p>

opencc-by-4.0Oct 2023View details →
zenodo36/100

Supporting data 2 for "Does increasing horizontal resolution improve the simulation of intense tropical rainfall?"

<p>Selected variables from a Geophysical Fluid Dynamics Laboratory&#39;s (GFDL) global atmospheric model version 4.0 (AM4) for a horizontal resolution of ~50 km (c192). Details of the simulations are documented in a manuscript titled &quot;Does increasing horizontal resolution improve the simulation of intense tropical rainfall?&quot; to be submitted to the Geophysical Research letters.</p>

opencc-by-4.0Oct 2023View details →
zenodo36/100

Supporting data 1 for "Does increasing horizontal resolution improve the simulation of intense tropical rainfall?"

<p>Selected variables from a Geophysical Fluid Dynamics Laboratory&#39;s (GFDL) global atmospheric model version 4.0 (AM4) for a horizontal resolution of ~100 km (c96). Details of the simulations are documented in a manuscript titled &quot;Does increasing horizontal resolution improve the simulation of intense tropical rainfall?&quot; to be submitted to the Geophysical Research letters.</p>

opencc-by-4.0Oct 2023View details →
zenodo36/100

A global hybrid tropical cyclone risk model based upon statistical and coupled climate models - Supporting figures and data

<p><strong>Introduction</strong></p><p>This contribution consists of 1) supporting figures and 2) supporting data for the submitted manuscript "A Global Hybrid Tropical Cyclone Risk Model based upon Statistical and Coupled Climate Models." Supporting figures are presented in two interactive HTML documents. The supporting datasets contain tropical cyclone event sets, catalogs, and an example analysis that plots summaries of the simulated catalogs and compares them to historical observations. All files are provided for the 400 ensemble members (event sets) that represent climate model years 1981-2020 (40 years) from the first 10 CESM-LE members.</p><p><strong>Contents</strong></p><p>./Catalog/sim_650</p><p>Tropical cyclone annual catalog for each basin based on the CESM-LE distribution of ENSO phases. 650 simulations are provided for each of 400 event sets. Each file contains the catalog for a single basin and is written as catalog_tc_(BASIN)_sim650_my400_nbinom_condmeanensojma.csv., where BASIN can be NA, EP, WP, NI, SI, SP.</p><p>./Documentation</p><p>TCMODEL_UQAM_EXAMPLE.html: Analysis script showing example of use of the tropical cyclone catalogs and comparison to historical observations.</p><p>UQAM_TC_Model_Data_Supplement_Dictionary.xlsx: Data dictionary of all data supplement file contents.</p><p>./IBTRACS</p><p>Summary of IBTrACS data required in the analysis script.</p><p>./TrajectoryBanks</p><p>Contains subdirectories for each basin (EP, NAT, NI, SI, SP, WP)</p><p>Each subdirectory contains several files summarizing the event sets, or banks, of tropical cyclone trajectories.</p><p><strong>Versions</strong></p><p>Version 1.0.1: Updated TCMODEL_UQAM_SUPPORTING_FIGURES.zip for revisions to submitted manuscript.</p><p>Version 1.0.0: Original version.</p><p>&nbsp;</p>

opencc-by-nc-nd-4.0May 2023View details →
zenodo36/100

NICOCO simulation data for the article "Diagnostic method for atmosphere–ocean coupling over tropical oceans at the sub-seasonal timescale"

<p>This data set includes data from an 8-year integration on the atmosphere-ocean coupled model NICOCO from 1 January 2010 to 31 December 2017. All outputs are daily averages on 1 x 1 degrees resolution. Output variables are sea surface temperature (K) and column water vapor (kg m-2).&nbsp;</p>

opencc-by-4.0Oct 2023View details →
dryad36/100

Dispersal limitation predicts the spatial and temporal filtering of tropical bird communities in isolated forest fragments

<p>The link between dispersal traits and patterns of community assembly remains a frontier in understanding how vertebrate communities persist in fragmented landscapes. Using experimental release trials and intensive field surveys of bird communities in fragmented forests of the Peruvian and Colombian Andes, we demonstrate that morphological traits related to movement (1) predict experimental flight performance and (2) exhibit dispersal-mediated environmental filtering at the community scale. After correcting for body size, four traits hypothesized to influence flight ability (wing length, wing pointedness, wing loading, and eye size) predicted distance flown across a hostile experimental landscape, with successful species having significantly longer pointed wings, carrying less mass per unit wing area (i.e., lower wing loading), and having smaller eyes. Species with larger eyes also displayed increased flight latency, potentially due to disability glare. At the community scale we detected a gradient of dispersal-mediated environmental filtering in fragments compared to reference forest within the same landscape, with relative differences in trait values explained by the temporal and spatial extent of patch isolation. In the Colombian landscape where fragments had been isolated for &gt; 60 years, communities were filtered for species with long and narrow wings and small eyes, especially within the most spatially isolated fragments. We observed the opposite pattern in the more recently fragmented Peruvian landscape (15-30 years): communities within fragments tended to have shorter and more rounded wings compared to those in nearby contiguous forests, suggesting that dispersal-limited species accumulate in the initial years following patch isolation due to "restricted dispersal" and represent an extinction debt yet to be paid. Our results (1) experimentally validate the use of morphological traits as proxies for movement ability in fragmented landscapes, (2) demonstrate that visual acuity functions as a novel dimension of dispersal limitation, and (3) quantify how the spatial and temporal components of patch isolation produce a gradient in dispersal-mediated environmental filtering and extinction debt for communities inhabiting fragments.</p>

opencc-zeroOct 2023View details →
dryad36/100

Tillage agriculture and afforestation threaten tropical savanna plant communities across a broad rainfall gradient in India

<p>The consequences of land-use change for savanna biodiversity remain undocumented in most regions of tropical Asia. One such region is western Maharashtra, India, where old-growth savannas occupy a broad rainfall gradient and are increasingly rare due to agricultural conversion and afforestation.</p> <p>To understand the consequences of land-use change, we sampled herbaceous plant communities of old-growth savannas and three alternative land-use types: tree plantations, tillage agriculture, and agricultural fallows (<em>n</em>=15 sites per type). Study sites spanned 457 to 1954 mm of mean annual precipitation—corresponding to the typical rainfall range of mesic savannas globally.</p> <p>Across the rainfall gradient, we found consistent declines in old-growth savanna plant communities due to land-use change. Local-scale native species richness dropped from a mean of 12 species/m<sup>2</sup> in old-growth savannas to 8, 6, and 3 species/m<sup>2</sup> in tree plantations, fallows, and tillage agriculture, respectively. Cover of native plants declined from a mean of 49% in old-growth savannas to 27% in both tree plantations and fallows, and 4% in tillage agriculture. Reductions in native cover coincided with increased cover of invasive species in tree plantations (18%), fallows (18%), and tillage agriculture (3%).</p> <p>In analyses of community composition, tillage agriculture was most dissimilar to old-growth savannas, while tree plantations and fallows showed intermediate dissimilarity. These compositional changes were driven partly by the loss of characteristic savanna species: 65 species recorded in old-growth savannas were absent in other land uses. Indicator analysis revealed 21 old-growth species, comprised mostly of native savanna specialists. Indicators of tree plantations (9 species) and fallows (13 species) were both invasive and native species, while the 2 indicators of tillage agriculture were invasive. As reflective of declines in savanna communities, mean native perennial graminoid cover of 27% in old-growth savannas dropped to 9%, 7%, and 0.1% in tree plantations, fallows, and tillage agriculture, respectively.</p> <p><strong>Synthesis</strong>: Agricultural conversion and afforestation of old-growth savannas in India destroys and degrades herbaceous plant communities that do not spontaneously recover on fallowed land. Efforts to conserve India's native biodiversity should encompass the country's widespread savanna biome and seek to limit conversion of irreplaceable old-growth savannas.</p>

opencc-zeroOct 2023View details →

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

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OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record

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