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FIGURE 2. Heliconius melpomene aglaope C. Felder & R. Felder, 1862 in Alternative facts: a reconsideration of putatively natural interspecific hybrid specimens in the genus Heliconius (Lepidoptera: Nymphalidae)
FIGURE 2. Heliconius melpomene aglaope C. Felder & R. Felder, 1862 (dorsal; ventral). Peru: Loreto, Contamana, 170 m. 26 May 2002. leg. C. Peña. (Image source: http://www.tolweb.org/, images #17224 and #17230). This specimen exhibits a "typical" phenotype of a geographical race with the red forewing "dennis" and hindwing "ray" pattern.
FIGURE 2. MCZ R-22483 in Systematic revision of the living African Slender-snouted Crocodiles (Mecistops Gray, 1844)
FIGURE 2. MCZ R-22483, neotype, Mecistops cataphractus. Photographic series showing dorsal, ventral, and lateral views of the skull, and overview of the mandibles. Photo credit: Museum of Comparative Zoology, Harvard University, ©President and Fellows of Harvard College.
Supplementary material 1 from: Miu IV, Chisamera GB, Popescu VD, Iosif R, Nita A, Manolache S, Gavril VD, Cobzaru I, Rozylowicz L (2018) Conservation priorities for terrestrial mammals in Dobrogea Region, Romania. ZooKeys 792: 133-158. https://doi.org/10.3897/zookeys.792.25314
Publications used to compile distribution of terrestrial mammal species from Dobrogea Region, Romania (field reports and data from museum collections) :
Supplementary material 2 from: Miu IV, Chisamera GB, Popescu VD, Iosif R, Nita A, Manolache S, Gavril VD, Cobzaru I, Rozylowicz L (2018) Conservation priorities for terrestrial mammals in Dobrogea Region, Romania. ZooKeys 792: 133-158. https://doi.org/10.3897/zookeys.792.25314
Occurrences maps for 59 mammal species : Explanation note: The mammal species old (before 1990) and new (after 1990) occurrence records at a 5 × 5 km grid resolution within Dobrogea, Romania.
Supplementary material 1 from: Tan JP-C, Tam SM, Kiew R (2018) Begonia yenyeniae (Begoniaceae), a new species from Endau Rompin National Park, Johor, Malaysia. PhytoKeys 110: 23-37. https://doi.org/10.3897/phytokeys.110.25846
List of taxa with accession and location information for the 48 samples of Begonia included in the Bayesian analysis using ndhF-rpl32 intergenic spacer sequences :
Supplementary material 1 from: Early R, González-Moreno P, Murphy ST, Day R (2018) Forecasting the global extent of invasion of the cereal pest Spodoptera frugiperda, the fall armyworm. NeoBiota 40: 25-50. https://doi.org/10.3897/neobiota.40.28165
Supplementary material : Explanation note: Table S1. Summary of evidence for fall armyworm developmental and population responses to the environment extracted from literature sources. Figure S1. Effect of different sub-sampling proportions and pseudo-absence selection diameters on model predictions (maps). Figure S2. Effect of different sub-sampling proportions and pseudo-absence selection diameters on Balanced Accuracy. Figure S3. Histograms of each environmental variable in 10 arc-minute grid-cells from which the fall armyworm is recorded. Figure S4. Multivariate Environmental Similarity Surface analysis. Figure S5. Empirically measured environmental effects on fall armyworm life cycle. Figure S6. Trade and passenger air transportation within Africa.
Supplementary material 1 from: Galasso G, Domina G, Alessandrini A, Ardenghi NMG, Bacchetta G, Ballelli S, Bartolucci F, Brundu G, Buono S, Busnardo G, Calvia G, Capece P, D'Antraccoli M, Di Nuzzo L, Fanfarillo E, Ferretti G, Guarino R, Iamonico D, Iberite M, Latini M, Lazzaro L, Lonati M, Lozano V, Magrini S, Mei G, Mereu G, Moro A, Mugnai M, Nicolella G, Nimis PL, Olivieri Н, Pennesi R, Peruzzi L, Podda L, Probo M, Prosser F, Ravetto Enri S, Roma-Marzio F, Ruggero A, Scafidi F, Stinca A, Nepi C (2018) Notulae to the Italian alien vascular flora: 6. Italian Botanist 6: 65-90. https://doi.org/10.3897/italianbotanist.6.30560
Supplementary data : Explanation note: 1. Nomenclature updates; 2. Note updates; 3. Distribution updates; 4. Synonyms, misapplied or included names.
Supplementary material 1 from: Clarke S, Stenekes N, Kancans R, Woodland C, Robinson A (2018) Undelivered risk: A counter-factual analysis of the biosecurity risk avoided by inspecting international mail articles. NeoBiota 40: 73-86. https://doi.org/10.3897/neobiota.40.28840
Variogram of the residuals of the random forest model : Explanation note: A variogram designed to visually assess whether there is spatial correlation present in the residuals of the random forest model. This does not indicate any spatial correlation.
Supplementary material 7 from: Seltmann K, Lafia S, Paul D, James S, Bloom D, Rios N, Ellis S, Farrell U, Utrup J, Yost M, Davis E, Emery R, Motz G, Kimmig J, Shirey V, Sandall E, Park D, Tyrrell C, Thackurdeen R, Collins M, O'Leary V, Prestridge H, Evelyn C, Nyberg B (2018) Georeferencing for Research Use (GRU): An integrated geospatial training paradigm for biocollections researchers and data providers. Research Ideas and Outcomes 4: e32449. https://doi.org/10.3897/rio.4.e32449
This document contains an annotated set of data quality checks that participants report they use when evaluating and cleaning datasets. These items outline how participants are judging if the data suits their purpose.
Supplementary material 3 from: Seltmann K, Lafia S, Paul D, James S, Bloom D, Rios N, Ellis S, Farrell U, Utrup J, Yost M, Davis E, Emery R, Motz G, Kimmig J, Shirey V, Sandall E, Park D, Tyrrell C, Thackurdeen R, Collins M, O'Leary V, Prestridge H, Evelyn C, Nyberg B (2018) Georeferencing for Research Use (GRU): An integrated geospatial training paradigm for biocollections researchers and data providers. Research Ideas and Outcomes 4: e32449. https://doi.org/10.3897/rio.4.e32449
The informed consent request and workshop survey questions given to participants after the workshop each day for 4 consecutive days.
Supplementary material 2 from: Seltmann K, Lafia S, Paul D, James S, Bloom D, Rios N, Ellis S, Farrell U, Utrup J, Yost M, Davis E, Emery R, Motz G, Kimmig J, Shirey V, Sandall E, Park D, Tyrrell C, Thackurdeen R, Collins M, O'Leary V, Prestridge H, Evelyn C, Nyberg B (2018) Georeferencing for Research Use (GRU): An integrated geospatial training paradigm for biocollections researchers and data providers. Research Ideas and Outcomes 4: e32449. https://doi.org/10.3897/rio.4.e32449
This document shows just the questions we asked the applicants who applied to participate in this Georeferencing for Research Use workshop. We used a Google Form to deliver these questions and collect responses. It is both an application and serves as our pre-workshop survey.
Supplementary material 8 from: Seltmann K, Lafia S, Paul D, James S, Bloom D, Rios N, Ellis S, Farrell U, Utrup J, Yost M, Davis E, Emery R, Motz G, Kimmig J, Shirey V, Sandall E, Park D, Tyrrell C, Thackurdeen R, Collins M, O'Leary V, Prestridge H, Evelyn C, Nyberg B (2018) Georeferencing for Research Use (GRU): An integrated geospatial training paradigm for biocollections researchers and data providers. Research Ideas and Outcomes 4: e32449. https://doi.org/10.3897/rio.4.e32449
Summary of desired future workshop topics that were listed by participants on the last day of the workshop.
Supplementary material 6 from: Seltmann K, Lafia S, Paul D, James S, Bloom D, Rios N, Ellis S, Farrell U, Utrup J, Yost M, Davis E, Emery R, Motz G, Kimmig J, Shirey V, Sandall E, Park D, Tyrrell C, Thackurdeen R, Collins M, O'Leary V, Prestridge H, Evelyn C, Nyberg B (2018) Georeferencing for Research Use (GRU): An integrated geospatial training paradigm for biocollections researchers and data providers. Research Ideas and Outcomes 4: e32449. https://doi.org/10.3897/rio.4.e32449
Summary of topics to be covered in an ideal workshop as identified by workshop applicants in the workshop call for participation. We incorporated as many as possible that also fit our scope.
Supplementary material 5 from: Seltmann K, Lafia S, Paul D, James S, Bloom D, Rios N, Ellis S, Farrell U, Utrup J, Yost M, Davis E, Emery R, Motz G, Kimmig J, Shirey V, Sandall E, Park D, Tyrrell C, Thackurdeen R, Collins M, O'Leary V, Prestridge H, Evelyn C, Nyberg B (2018) Georeferencing for Research Use (GRU): An integrated geospatial training paradigm for biocollections researchers and data providers. Research Ideas and Outcomes 4: e32449. https://doi.org/10.3897/rio.4.e32449
Questions we asked in the Georeferencing for Research Follow Up Survey done 3 months after the workshop.
Supplementary material 4 from: Seltmann K, Lafia S, Paul D, James S, Bloom D, Rios N, Ellis S, Farrell U, Utrup J, Yost M, Davis E, Emery R, Motz G, Kimmig J, Shirey V, Sandall E, Park D, Tyrrell C, Thackurdeen R, Collins M, O'Leary V, Prestridge H, Evelyn C, Nyberg B (2018) Georeferencing for Research Use (GRU): An integrated geospatial training paradigm for biocollections researchers and data providers. Research Ideas and Outcomes 4: e32449. https://doi.org/10.3897/rio.4.e32449
Three months after the workshop, participants were surveyed to assess what workshop-related knowledge and materials were being used and disseminated to others. This document summarized data collected in this particular survey.
Supplementary material 1 from: Seltmann K, Lafia S, Paul D, James S, Bloom D, Rios N, Ellis S, Farrell U, Utrup J, Yost M, Davis E, Emery R, Motz G, Kimmig J, Shirey V, Sandall E, Park D, Tyrrell C, Thackurdeen R, Collins M, O'Leary V, Prestridge H, Evelyn C, Nyberg B (2018) Georeferencing for Research Use (GRU): An integrated geospatial training paradigm for biocollections researchers and data providers. Research Ideas and Outcomes 4: e32449. https://doi.org/10.3897/rio.4.e32449
Darwin Core Archive file downloaded from the iDigBio portal for use in the Georeferencing for Research Use workshop. Total 25,429 records, accessed on 2016-08-29. Collections contributing to the record set are listed in the archive records.citation.txt file. Dataset GUID: a69d1541-4726-465d-84ad-50c7ed556eee
Supplementary material 1 from: Zhang Z, Zang R (2018) Diversity and distribution of food plants: Implications for conservation of the critically endangered Hainan gibbon. Nature Conservation 31: 17-33. https://doi.org/10.3897/natureconservation.31.27407
Table S1 : Explanation note: Species list, abundances and characteristics of food woody plant species for Hainan gibbon sampled in young natural secondary forests (YSF, < 25 yr since disturbance), middle-aged natural secondary forests (MSF, 25–60 yr since disturbance), old natural forests (OGF, > 60 yr since disturbance) and plantation forests (PF, 20–35 yr) of tropical forest area in BNNR, Hainan Island, China. Tot fts: total number of forest types in which the species occurs.
FIGURE 2. J–R in Review of Indonesian species of the leafhopper genus Drabescus Stål (Hemiptera: Cicadellidae: Deltocephalinae) with description of two new species
FIGURE 2. J–R Male genitalia of D. stilliformis sp. nov.; J, Genital capsule, left lateral view; K, Genital capsule, ventral view; L, Valve, subgenital plate, style, connective and aedeagus, dorsal view; M, Valve, subgenital plate and style, dorsal view; N, Left style, ventral view; O, Connective, ventral view; P–R, Aedeagus, dorsal, posterior and left lateral view, respectively.
FIGURES 1–6 in A new Endoclita (C. &. R. Felder, 1874) from the High Mountains of Taiwan with notes about its evolutionary origins (Lepidoptera: Hepialidae)
FIGURES 1–6. Voucher specimens: Endoclita atayala sp. n., female HT (NMNS). 1a, dorsal; 1b, ventral. Photo by Ulf Buchsbaum. 2, E. crenilimbata female HT (MNHN), dorsal view. Photo by Joël Minet. E. atayala sp. n., morphology: 3, wing venation. Vein connections in basal regions unresolved. 4, costal lobe detail. 5, submarginal transverse band on outer margin of forewing. 6, boundaries of anterior discal cell (blue line) enclosing longitudinal markings: (a) E. atayala sp. n., (b) E. crenilimbata, (c) E. nodus (from Zhu et al. 2004).
FIGURE 18 in A new Endoclita (C. &. R. Felder, 1874) from the High Mountains of Taiwan with notes about its evolutionary origins (Lepidoptera: Hepialidae)
FIGURE 18. Conceptual model of vicariance origin for Endoclita atayala sp. n. in Taiwan: (a) Cretaceous orogeny extended mountainous landscape across continental shelf which supported widespread ancestral population for E. atayala sp. n., E. crenilimbata, and E. nodus (dark shaded polygon), present mainland coastline in stippled outline; (b) Survival of ancestral E. atayala sp. n. on volcanic island arcs separated from mainland by rifting (short arrows). Position of proto-Taiwan about 9 Ma shaded; (c) Population of E. atayala sp. n. now established on Taiwan following tectonic incorporation of island arc, and disjunct from E. crenilimbata, and E. nodus in south-western central China and northeastern China, respectively.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.