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1,007 results for “Smoothing”
FIGURE. View of the upper side in R. subcalcarata showing the smooth surface with crystal-like deposition (probably usnic acid). Scale = 40 µm. in The genus Ramalina Acharius (Ascomycota, Lecanoromycetes, Ramalinaceae) in northern South America
FIGURE. View of the upper side in R. subcalcarata showing the smooth surface with crystal-like deposition (probably usnic acid). Scale = 40 µm.
Are Palmer's elm-leaf goldenrod and the smooth elm-leaf goldenrod real? The Angiosperms353 kit provides within-species signal in Solidago ulmifolia s.l.
<p><b><i>Abstract </i>— </b>The genus <i>Solidago</i> represents a taxonomically challenging group due to its sheer number of species, putative hybridization, polyploidy, and shallow genetic divergence among species. Here we use a dataset obtained exclusively from herbarium specimens to evaluate the status of <i>Solidago ulmifolia</i> var. <i>palmeri</i>, a morphologically subtle taxon potentially confined to Alabama, Arkansas, Mississippi, and Missouri. A multivariate analysis of both discrete and continuous morphological data revealed no clear distinction between <i>S. ulmifolia</i> var. <i>palmeri</i> and <i>Solidago ulmifolia</i> var. <i>ulmifolia</i>. <i>Solidago ulmifolia</i> var. <i>palmeri</i>'s status was also assessed with a phylogenomic and SNP clustering analysis of data generated with the "Angiosperms353" probe kit. Neither analysis supported <i>Solidago ulmifolia</i> var. <i>palmeri</i> as a distinct taxon, and we suggest that this name should be discarded. The status of <i>Solidago delicatula</i> (formerly known as <i>Solidago ulmifolia</i> var. <i>microphylla</i>) was also assessed. Both morphological and phylogenetic analyses supported the species status of <i>S. delicatula</i> and we suggest maintaining this species at its current rank. These results highlight the utility of the Angiosperms353 probe kit, both with herbarium tissue and at lower taxonomic levels. Indeed, this is the first study to utilize this kit to identify genetic groups within a species.</p>
Large-scale annotation dataset for cell/tissue segmentation in H&E-stained images : anti-αSMA (smooth muscle cells / cancer associated firbroblasts)
<p><strong>LICENSE</strong></p> <p>This work is licensed under a Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (<strong>CC-BY-NC-SA 4.0</strong>)</p> <p>For non-commercial use, please use the dataset under CC-BY-NC-SA.<br> If you would like to use the dataset for commercial purposes, please contact us (ishum-prm@m.u-tokyo.ac.jp).</p> <p>A Tar.gz file contains the following files:</p> <p>- HE image file: {antigen}_{celltype}_{slideID}_{posx}_{posy}_HE.png</p> <p>- Mask image file: {antigen}_{celltype}_{slideID}_{posx}_{posy}_mask.png</p> <p>Each image file is 984x984 px.</p> <p>posX and posY are the leftmost position in WSI coordinate.</p> <p>Mask files store binary segmentation mask (background : 0, target : 1)</p> <p> </p> <p>A csv file contains the following information:</p> <p>antigen : Antibodies for this antigen were used to create the segmentation mask.</p> <p>filename: filename of image or mask file.</p> <p>train_val_test : train, validation, or test sample in the paper.</p> <p> </p> <p><strong>Citation</strong></p> <p>If you use this dataset for your research, please cite our paper.</p> <p>Daisuke Komura, Takumi Onoyama, Koki Shinbo, Hiroto Odaka, Minako Hayakawa, Mieko Ochi, Ranny Rahaningrum Herdiantoputri, Haruya Endo, Hiroto Katoh, Tohru Ikeda, Tetsuo Ushiku, Shumpei Ishikawa,<br> Restaining-based annotation for cancer histology segmentation to overcome annotation-related limitations among pathologists, Patterns, Volume 4, Issue 2, 2023, 100688, https://doi.org/10.1016/j.patter.2023.100688.</p>
Figure 2 in Vocal repertoire and group-specific signature in the Smooth-billed Ani, Crotophaga ani Linnaeus, 1758 (Cuculiformes, Aves)
Figure 2. Song structure of the Smooth-billed Ani showing the notes, sillable and harmonic.
Code and Data for "Intrinsic interface adsorption drives selectivity in atomically smooth nanofluidic channels"
<p>Code and data for reproducing the results in "Intrinsic interface adsorption drives selectivity in atomically smooth nanofluidic channels" by P. Helms, A. Poggioli, & D. T. Limmer</p>
FIGURE 3. Coccothrinax landestoyii. A. Habit, stems solitary. B. Inflorescences arching amongst the leaves, with few partial inflorescences along the rachis. C. Fruits with smooth surfaces. D in Five new species of Coccothrinax (Cryosophileae, Coryphoideae, Arecaceae) from Hispaniola
FIGURE 3. Coccothrinax landestoyii. A. Habit, stems solitary. B. Inflorescences arching amongst the leaves, with few partial inflorescences along the rachis. C. Fruits with smooth surfaces. D. Seed (viewed from top) with lobed surfaces, the lobes running from base of seeds approximately to equator. Images by M. Landestoy.
Figure 3 in Reproduction probabilities and size distributions of the smooth snake Coronella austriaca in the Netherlands and Norway
Figure 3. Changing state estimates between successive years for all states possible for the most conservative (left number) and the most inclusive approach (right number) for smooth snake Coronella austriaca in the Netherlands (a) and Norway (b). Arrow width corresponds to probabilities.
Figure 4 in Reproduction probabilities and size distributions of the smooth snake Coronella austriaca in the Netherlands and Norway
Figure 4. Neonate length (a), neonate weight (b), pregnant female total body length (c), pregnant female body mass (d) and mean clutch size (e) of pregnant female smooth snakes Coronella austriaca and neonates in The Netherlands (NL) and Norway (NO). Boxplots showing (from top to bottom) maximum, 75th percentile, median, 25th percentile and minimum values.
FIGURE 4. Inocybe tenuicystidiata, Fresh basidiomata. A in Inocybe hamadryadis (Inocybaceae, Agaricales), a new smooth-spored species from Europe and West Asia
FIGURE 4. Inocybe tenuicystidiata, Fresh basidiomata. A) DB26-10-19-2; B) DB29-10-16-7. Photos by D. Bandini.
FIGURE 1 in Inocybe hamadryadis (Inocybaceae, Agaricales), a new smooth-spored species from Europe and West Asia
FIGURE 1. Best tree of the Maximum Likelihood analysis of selected sequences of Inocybe from ITS-LSU sequence data. Maximum Likelihood bootstrap values (ML-BP) / Bayesian Posterior probabilities (PP) are shown on branches, ordered as ML-BP/PP. Thickened branches received support at least in one analysis (ML-BP ≥70 % and/or PP ≥0.95). Sequences in bold refer to type specimens. Original identification, ISO country code/potential host/voucher or isolate numbers are provided in this order for each taxon. Names recognized are indicated on the right side.
FIGURE 3 in Inocybe hamadryadis (Inocybaceae, Agaricales), a new smooth-spored species from Europe and West Asia
FIGURE 3. Inocybe hamadryadis MA-Fungi 98476 (holotype): microscopic structures (Ca: Caulocystidia, Ch: Cheilocystidia, Cpa: Cauloparacystidia, Pa: Paracystidia, Pl: Pleurocystidia, sp: Basidiospores). Drawings by D. Bandini
FIGURE 2 in Inocybe hamadryadis (Inocybaceae, Agaricales), a new smooth-spored species from Europe and West Asia
FIGURE 2. Inocybe hamadryadis: a: MA-Fungi 98476 (holotype) fresh basidiomata b: MA- Fungi 98651 fresh basidomata c: Basidiospores; d: Pleurocystidia; e: Cheilocystidia; f: Caulocystidia. (All microphotos from MA-Fungi 98476, holotype—Scale bars: a–b: 1 cm. Photos by F.J. Rodríguez-Campo.
Micro computed tomography images of capillary actions in smooth glass beads
<p>The present work investigates the effect of both surface roughness and particle morphology on the retention behaviour of granular materials. To study this, X-ray micro-computed tomography tests were performed on two types of spherical glass beads (i.e. smooth and rough) and two different sands (i.e. natural and roughened). Each sample was subjected to either drainage or soaking paths consisting in a multiphase ‘static’ flow of potassium iodine (KI) brine (wetting phase) and dry air (non-wetting phase). Tomograms were taken at different saturation states ranging from fully brine saturated to air dry conditions. </p>
A new species of smooth-spored Inocybe from Coniferous forests of Pakistan
<p><em>Inocybe</em> <em>bhurbanensis</em> is described and illustrated as a new species from Himalayan Moist Temperate forests of Pakistan. It is characterized by fibrillose, conical to convex, umbonate, brown to dark brown pileus, non-pruinose, fibrillose stipe with whitish tomentum at the base and smooth basidiospores that are larger (9 × 5.2 µm) and thicker caulocystidia (up to 21 m) as compared to the sister species <em>Inocybe</em> <em>demetris</em>. Phylogenetic analyses of a nuclear rDNA region encompassing the internal transcribed spacers 1 and 2 along with 5.8S rDNA (ITS) and the 28S rDNA D1–D2 domains (28S) also confirmed its novelty.</p>
Fig. 5 in Isoindolines and phthalides from the rhizomes of Ligusticum chuanxiong and their relaxant effects on the uterine smooth muscle
Fig. 5. The effects of compounds 4–10 and 12 on oxytocin-induced contractions of isolated rat uteruses. OT (0.008 U/mL) is the abbreviation for oxytocin. VER (0.5 μM) is the abbreviation for verapamil hydrochloride, a positive control. A: Inhibitory effects of compounds 4–10 and 12 on oxytocin-induced contractions of isolated rat uterus. B: Effects of compounds 4–10 and 12 on the contractile activity of the isolated rat uterus. C: Effects of compounds 4–10 and 12 on the contractile tension of the isolated rat uterus. D: Effects of compounds 4–10 and 12 on the contractile frequency of the isolated rat uterus. The data are expressed as the mean ± SEM (n = 6). * indicates p <0.05 and ** indicates p <0.01 compared to the solvent control.
Fig. 7 in Isoindolines and phthalides from the rhizomes of Ligusticum chuanxiong and their relaxant effects on the uterine smooth muscle
Fig. 7. Inhibitory effect of riligustilide (12) on OTinduced contraction of isolated rat uteruses in a Ca2+ -free solution. OT (0.016 U/mL) is the abbreviation for oxytocin. VER (0.5 μM) is the abbreviation for verapamil hydrochloride, a positive control. A: Traces for the effects of DMSO, VER, and riligustilide (12) on OT-induced contraction in isolated rat uteruses. B: The inhibition rates of contractile tension of VER and riligustilide (12). The data are expressed as the mean ± SEM (n = 6). * indicates p <0.05 and ** indicates p <0.01 compared to the solvent control.
Fig. 6 in Isoindolines and phthalides from the rhizomes of Ligusticum chuanxiong and their relaxant effects on the uterine smooth muscle
Fig. 6. Inhibitory effect of riligustilide (12) on KClinduced contraction of isolated rat uteruses. The final concentration of KCl was 60 mM. VER (0.5 μM) is the abbreviation for verapamil hydrochloride, a positive control. A: Traces for the effects of DMSO, VER, and riligustilide (12) on KCl-induced contraction in isolated rat uteruses. B: The inhibition rates of contractile tension of VER and riligustilide (12). The data are expressed as the mean ± SEM (n = 6). * indicates p <0.05 and ** indicates p <0.01 compared to the solvent control.
Data of smoothed particle hydrodynamic giant impact simulations for the paper "A super-massive Neptune-sized planet"
<p>This dataset contains data from the article:</p> <p>L. Naponiello et al. 2023 "A super-massive Neptune-sized planet". DOI: https://doi.org/10.1038/s41586-023-06499-2</p> <p>The dataset comprises initial conditions and final snapshots of the smoothed particle hydrodynamics simulations selected in the paper.</p> <p>All the simulations were performed using <a href="https://swift.com">SWIFT</a> with initial condtions generated using <a href="https://github.com/srbonilla/WoMa">WoMa</a>. The planets are modeled with forsterite core (see <a href="https://github.com/ststewart/aneos-forsterite-2019">Link</a>), water middle layer (see <a href="https://ui.adsabs.harvard.edu/abs/2020A%26A...643A.105H/abstract">link</a>), and H&He mixture atmosphere top layer (see <a href="https://ui.adsabs.harvard.edu/abs/1980JGR....85..225H/abstract">link</a>).</p> <p>We simulated three different pre-impact compositions: water-rich by mass (22.5 % rock, 67.5 % water, 10 % H/He), equal rock and water (45 % rock, 45 % water, 10 % H/He), and rock-rich (67.5 % rock, 22.5 % water, 10 % H/He). These are located in the "data.zip" file under the folders "water rich", "equal_water_rock", and "rock_rich", respectively. In each simulation subfolder, "snapshot_0000.hdf5" is the initial condition file, where the target and impactor are separated by a distance that allows contact to occur 1 hour after the start of the simulation. "snapshot_00xx.hdf5" is the final snapshot of that simulation, where "xx" is the simulation time in hours. For example, "snapshot_0015.hdf5" is the snapshot taken after 15 hours of the simulation.</p>
Data for: Modelling the surprising recolonisation of an understudied aquatic mammal in a highly urbanised area: Fortune favored the Smooth-coated otter in Singapore
<p>Ever-growing human activities present an active and continuing threat to many species throughout the world. Nevertheless, concerted conservation efforts in some regions have balanced these threats and allowed endangered species to recolonise former parts of their original ranges and reverse their decline. This is notably the case of the smooth-coated otter (<em>Lutrogale</em> <em>perspicillata</em>). In 1998, individuals returned to Singapore after more than a 20-year absence. In 2017, 79 otters were counted throughout the heavily urbanized city. Despite this comeback, the future of the species in Singapore is unclear. By collating information on the species' life history traits, we implemented a spatially explicit individual-based model. The model demonstrated that successful establishment of Singapore's population from the initial immigrants was highly uncertain. In 43% of cases, stochastic extinction occurred. From the 9% of model replicates that closely reproduced the observed colonisation history, projections showed that the population would reach close to 200 individuals in 50 years. This study successfully demonstrates the use of individual-based modelling to simulate the inherently stochastic recolonisation dynamics of an endangered species and predict its longer-term future. We discuss emerging issues that may arise from increasing negative interactions between otters and humans and the general challenges associated with rewilding highly urbanized environments. We stress the importance of long-term monitoring surveys and education campaigns to mitigate human-wildlife conflicts. With species and natural habitats increasingly threatened by our ever-growing human expansion, understanding the factors that allow human-dominated landscapes to be compatible with biodiversity is of the utmost importance.</p>
Distribution of Smooth Muscle In Dartos In The Non Conspicuous Penis
ClinicalTrials.gov study NCT03295175. IPD Sharing: NO. Countries: 1. Publications: 14.
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