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7,195
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7,195 results for “SET”
Data sets for chemoinformatics and computational medicinal chemistry
<p>Data sets provided herein are a part of a freely available database of annotated compound data sets and software tools developed in our laboratory for chemoinformatics and computational medicinal chemistry. The original release is described in the following article:<br /> <br /> Hu Y, Bajorath J: Freely available compound data sets and software tools for chemoinformatics and computational medicinal chemistry applications [v1; ref status: indexed, http://f1000r.es/Mu9krs] <em>F1000Research </em>2012; 1:11 (doi: 10.12688/f1000research.1-11.v1).<br /> <br /> The updated version containing the data provided herein will be described in a forthcoming data note in <em>F1000Research</em>.</p>
Pharmaceutical Equivalence of Distributed Generic Antiretroviral (ARV) in Asian settings: the cross-sectional surveillance study -PEDA study
<p>This is the raw data for the PEDA study.</p>
Related Change Sets and Regression
<p>Number of commit pairs</p> <p>Commit pairs relatedness</p> <p>Regression results</p>
Data Set From Molisan Regional Seismic Network Events
<p>Abstract:</p> <p><em>After the earthquake occurred in Molise (Central Italy) on 31st October 2002<br /> (Ml 5.4, 29 people dead), the local Servizio Regionale per la Protezione Civile<br /> to ensure a better analysis of local seismic data, through a convention with<br /> the Istituto Nazionale di Geofisica e Vulcanologia (INGV), promoted the design<br /> of the Regional Seismic Network (RMSM) and funded its implementation. The 5<br /> stations of RMSM worked since 2007 to 2013 collecting a large amount of seismic<br /> data and giving an important contribution to the study of seismic sources<br /> present in the region and the surrounding territory. This work reports about<br /> the dataset containing all triggers collected by RMSM since July 2007 to March<br /> 2009, including actual seismic events; among them, all earthquakes events<br /> recorded in coincidence to Rete Sismica Nazionale Centralizzata (RSNC) of INGV<br /> have been marked with S and P arrival timestamps. Every trigger has been<br /> associated to a spectrogram defined into a recorded time vs. frequency domain.<br /> The main aim of this structured dataset is to be used for further analysis with<br /> data mining and machine learning techniques on image patterns associated to the<br /> waveforms.</em></p> <p>Link arXiv: http://arxiv.org/abs/1607.02607</p>
An Efficient Implementation of Online Arithmetic -- Data set
<p>This is the released dataset for 'An Efficient Implementation of Online Arithmetic'</p>
SCAD-zbMATH-01 Open Access Data Set for Author Name Disambiguation (AND) (Enhanced Version)
<p>This data set contains disambiguated publication data from zbMATH (www.zbmath.org) for use in author name disambiguation (AND). It covers 28321 publications with 33810 authorship records, authored by 2946 distinct authors. Authorship records have been manually annotated with author identifiers.</p> <p>This download includes additional data sets for advanced, selective disambiguation.</p> <p>For details, see "Mark-Christoph Müller, Florian Reitz, and Nicolas Roy (2017): Data Sets for Author Name Disambiguation: An Empirical Analysis and a New Resource", Scientometrics, doi:10.1007/s11192-017-2363-5.</p> <p> </p>
Trajectory data and TraJClassifier settings
<p>The zip file contains a folder for each applied method. Each folder contain two files:</p> <p>settings.xls: These are the settings used for the TraJClassifier</p> <p>tracks.xml: This file contains the trajectory data measured by TrackMate. It can be loaded into the TraJClassifier plugin.</p>
The DIsgust-RelaTed-Images (DIRTI) Database: Validation of a novel standardized set of disgust pictures
<p>Selecting appropriate stimuli is a major challenge of affective research. Although several standardized databases for affective pictures exist, none of them focus on discrete emotions such as disgust. Validated pictures inducing discrete emotions are still limited, and this presents a problem for researchers interested in studying different facets of disgust. In this paper, we introduce the DIsgust-RelaTed-Images (DIRTI) picture set. The set consists of 240 disgust-inducing pictures divided into six categories (<em>food</em>, <em>animals</em>, <em>body products</em>, <em>injuries/infections</em>, <em>death</em>, and <em>hygiene</em>). Additionally, we included 60 matched neutral pictures (10 per category). All pictures were rated by 200 participants on nine-point rating scales measuring <em>disgust</em>, <em>fear</em>, <em>valence,</em> and <em>arousal</em>. The present validation study covered a wide age range (18–75 years) with a balanced number of participants in each decade of life. For each picture, we provide separate ratings on the four scales for men and women. In addition to the original pictures, we also provide a luminance-matched version for experiments that require control of the physical properties of the pictures. The standardized DIRTI picture set allows researchers to chose from a wide set of disgust-inducing pictures and may enhance researchers’ ability to draw comparisons between studies on disgust. (Download DIRTI picture set: http://dx.doi.org/10.5281/zenodo.167037).</p> <p>Picture sets and supplementary material relative to the following publication:</p> <p>Haberkamp, A., Glombiewski, J. A., Schmidt, F., & Barke, A. (submitted). The DIsgust-RelaTed-Images (DIRTI) Database: Validation of a novel standardized set of disgust pictures. <em>Behaviour Research and Therapy</em>.</p> <p>The three files contain the following content.</p> <p><em>DIRTI Database.zip</em> → original picture set</p> <p><em>DIRTI luminance matched images.zip</em> → luminance-matched version of the picture set</p> <p><em>DIRTI Supplementary Material.zip</em> → excel file containing separate worksheets for all ratings (disgust, valence, arousal, fear), for the physical properties of the original and luminance-matched disgust pictures, and for a luminance-matched subset of the original disgust pictures</p>
AMT-2016-253-DATA SETS
<p>All below datasets accompanie the article, to appear in Atmospheric Measurement Techniques (AMT), titled "Uncertainties of ground-based microwave radiometer retrievals in zenith and off-zenith observations under snow conditions" by Wengang Zhang et al. </p> <p>Data are associated with Table 2 and Figure 1-11.The detials are shown in the readme.txt in the folder.</p>
FIGURE 4. Palaeogeographic Setting for the early Austrobalanidae. 4a in A review of the subfamily Eliminiinae (Cirripedia: Thoracica: Austrobalanidae), including a new genus, Protelminius nov., from the Oligocene of New Zealand
FIGURE 4. Palaeogeographic Setting for the early Austrobalanidae. 4a: Sketch depicting the oceanic systems that are likely to have operated in the south Pacific region during the late Palaeocene-early Eocene. At this time, the Antarctic continent was kept essentially ice-free by a large south Pacific warm-water gyre; counter-currents operating off Antarctic provided an opportunity for westward dispersal of Austrobalanus (to the McMurdo region and the proto-New Zealand land mass "NZ"). The dashed line represents a likely mobile transitional zone between marine regression and transgression. 4b: Southern ocean conditions during the Oligocene to early Miocene, after the initiation of the Antarctic Circumpolar Current. With the loss of the southern pacific warm-water gyre, glaciation of the Antarctic continent began (e.g. Kennett, 1977), with the resultant regional extinction of austrobalanid barnacles. The heavier dotted blue line represents the likely position of the cold and temperate water systems convergence. (Reconstruction adapted from Markwick et al., 1999; Barron and Peterson, 1991; Nelson and Cooke, 2001).
regNet: Data sets and computations
<p>Data sets compatible with the R package regNet available from GitHub under https://github.com/seifemi/regNet.</p> <p>The Zip-File contains all data sets that are required to run the regNet code usage examples.</p>
Data set of a single waveguide silicon-organic hybrid modulator
<p>This data set contains measurement data and simulation results of a single waveguide silicon-organic hybrid modulator. The modulator is presented in the paper "Single waveguide silicon-organic hybrid modulator" in the open-access journal "Advances in Radio Science".</p>
Huntingtin +/- DNA oligo cryo and negative stain grid set up and screening
<p>Huntingtin structure-function open lab notebook project. </p>
Atomistic Fingerprint of Hyaluronan-CD44 Binding: Unbound Simulations, Set 2
<p>Simulation files (Gromacs 4.6.7 format) for the "Unbound" simulations in Ref. [1]. There are two replicas marked with "_4" and "_5".</p> <p>Files include:</p> <p>-trajectories (.xtc) that are saved every 100ps <br> -initial structures (.gro), <br> -run input files (.tpr)<br> -checkpoint files (.cpt)<br> -simulation parameter files (.mdp)<br> -system topology file (.top)<br> -topology files included in the system topology file (.itp)</p> <p>[1] Vuorio J. et al., Atomistic Fingerprint of Hyaluronan-CD44 Binding, PLOS Comp. Biol., 2017. (Submitted)</p>
Atomistic Fingerprint of Hyaluronan-CD44 Binding: Unbound Simulations, Set 1
<p>Simulation files (Gromacs 4.6.7 format) for the "Unbound" simulations in Ref. [1]. There are three replicas marked with "_1" , "_2", and "_3".</p> <p>Files include:</p> <p>-trajectories (.xtc) that are saved every 100ps <br> -initial structures (.gro), <br> -run input files (.tpr)<br> -checkpoint files (.cpt)<br> -simulation parameter files (.mdp)<br> -system topology file (.top)<br> -topology files included in the system topology file (.itp)</p> <p>[1] Vuorio J. et al., Atomistic Fingerprint of Hyaluronan-CD44 Binding, PLOS Comp. Biol., 2017. (Submitted)</p>
Effects of individualized Electrical Impedance Tomography and image reconstruction settings upon the assessment of regional ventilation distribution: Comparison to 4-dimensional Computed Tomography in a porcine model
<p>Reconstruction Models used for identification of optimal settings for comparison to CT images. Forward models are available in the supplement of the article but were removed form the inverse models due to redundance storage within each model.</p> <p>Prior reconstruction in EIDORS, forward models have to be added again to<em> imdl.fwd_model</em> and <em>imdl.jacobian_background.fwd_model</em>.</p>
Training sets for small genome assembly with Unicycler in Galaxy
<p>Downsampled datasets for the small genome assembly in Galaxy training. These include 3 files : forward and reverse reads from Illumina sequencing , and Long read file from Oxford Nanopore sequencing.</p>
Research Data for 'Oxic conditions in shallow marine settings during the Permian-Triassic Mass Extinction'
<p>Complete geochemical data set for Siusi/Seis including bulk major, minor and trace element data as well as TOC and mercury content.</p>
Benchmarking data sets for software 'plastburstalign'
<p>Benchmarking data sets for software 'plastburstalign'</p>
Electron concentration profiles calculated using eight-component model of the ionospheric D-region and two different set of input atmospheric data
<p>The files contain electron concentration <i>Ne</i> profiles during solar X-ray flares that occurred on 9-11 June 2014. The altitude range is 50-90 km.</p><p>Values of electron concentration were calculated using eight-component model of the ionospheric D-region and two different set of input atmospheric data (MSIS neutral atmosphere model and Aura satellite measurements). Results are obtained for ten VLF paths: from European transmitters ICV, TBB, GQD, GBZ, and DHO to Mikhnevo geophysical observatory (55°N 38°E) and A118 SID station (43°N 1°E).</p><p>The data is presented as MATLAB files. Each .mat file contains data and variable "description" with data's structure information.</p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.