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1,199 results for “Alignement”
DNA alignments for MSc Thesis, University of Edinburgh.
<p>DNA alignments compiled for MSc Thesis, University of Edinburgh. Myanmar Ancestral Area Reconstruction.</p>
Clinical expression of programmed maxillary buccal expansion and buccolingual crown inclination with Invisalign® EX30® and SmartTrack® aligners and investigating the effect of 1-week vs 2-week aligner change regimes: A retrospective study.
<p><strong><em>Objective:</em></strong> The objective of this retrospective cohort study is to assess and compare the accuracy of three different Invisalign<sup>® </sup>treatment regimens involving variations of aligner change frequency and type of aligner material in achieving maxillary dental buccal expansion.</p> <p> </p> <p><strong><em>Methods:</em></strong> 120 adult patients whose treatment involved maxillary dental expansion with Invisalign<sup>®</sup> were selected. Three groups, each of 40 patients were identified: SmartTrack<sup>®</sup> one-week changes (ST1), SmartTrack<sup>®</sup> two-week changes (ST2) and EX30<sup>®</sup> two-week changes (EX2). The groups were assessed by comparing actual changes achieved with those prescribed by ClinCheck<sup>®</sup>. The rates of clinically significant inaccuracies (CSI) seen for buccal expansion (≥ 0.5mm) and buccolingual inclination (≥2°) during expansion were then ascertained.</p> <p> </p> <p><strong><em>Results:</em></strong> With respect to expansion, the ST1 group showed the highest rate of CSI at all tooth levels studied while the ST2 group showed the lowest rate of CSI as well as the lowest mean inaccuracy for each tooth level studied. In terms of buccolingual inclination, the ST1 group displayed the highest rate of CSI across all tooth levels studied, while the EX2 group displayed the lowest rate of CSI at all tooth levels except for the canine level where the ST2 group displayed the lowest rate of CSI. A tendency toward overexpression of buccal crown inclination, and underexpression of buccal expansion was seen at all tooth levels.</p> <p> </p> <p><strong><em>Conclusions:</em></strong> Two-week aligner change regimens offer improved accuracy compared with one-week aligner changes. SmartTrack<sup>®</sup> two-week changes were the most accurate for buccal expansion, while EX30<sup>®</sup> 2-week changes were the most accurate for buccolingual inclination.</p>
Book One of The Iliad, Persian and Kurdish Translation with Word-level Alignment to the Treebank, Didakta Annotations and Glossary
<p>This dataset includes Persian and Kurdish translation of book one of the Iliad, aligned at word-level with the treebanks. The Persian translation is by Farnoosh Shamsian and the Kurdish translation by Farshid Rahimi. The dataset also includes glossaries in both languages. </p> <p>The treebank data combines both the UD treebank and the Perseus treebank in one spreadsheet. The Perseus treebank is available here: <a href="http://perseusdl.github.io/treebank_data/">http://perseusdl.github.io/treebank_data/</a></p> <p>The UD version is converted by Francesco Mambrini. For more information, see: <a href="https://github.com/francescomambrini/katholou/tree/main/ud_treebanks/agdt/data">https://github.com/francescomambrini/katholou/tree/main/ud_treebanks/agdt/data</a></p> <p>Both translations are aligned word by word to the treebank according to guidelines. The guideline for the Persian alignment is available here:</p> <p>Farnoosh Shamsian. (2023). Alignment Guidelines for Classical Greek-Persian. Zenodo. <a href="https://doi.org/10.5281/zenodo.8039931">https://doi.org/10.5281/zenodo.8039931</a></p> <p>The spreadsheet also contains Didakta annotations. For moe information about Didakta, see: </p> <p>Farnoosh Shamsian. (2023). Didakta Grammar for Annotation (English). Zenodo. <a href="http://https://doi.org/10.5281/zenodo.8318137">https://doi.org/10.5281/zenodo.8318137</a></p> <p> </p>
Alignment-based protein mutational landscape prediction: doing more with less
<div class="page"> <div class="layoutArea"> <div class="column"> <p>The wealth of genomic data has boosted the development of computational methods predicting the phenotypic outcomes of missense variants. The most accurate ones exploit multiple sequence alignments, which can be costly to generate. Recent efforts for democratizing protein structure prediction have overcome this bottleneck by leveraging the fast homology search of MMseqs2. Here, we show the usefulness of this strategy for mutational outcome prediction through a large-scale assessment of 1.5M missense variants across 72 protein families. Our study demonstrates the feasibility of producing alignment-based mutational landscape predictions that are both high-quality and compute-efficient for entire proteomes. We provide the community with the whole human proteome mutational landscape and simplified access to our predictive pipeline.</p> </div> </div> </div>
Scaffold Matcher: A CMA-ES based algorithm for identifying hotspot aligned peptidomimetic scaffolds (datasets)
<p>Datafiles used to reproduce the results in the "Scaffold Matcher: A CMA-ES based algorithm for identifying hotspot aligned peptidomimetic scaffolds" publication. Contains input files as well as files generated by the algorithm. Details can be found in the manuscript.</p> <p>SARSCoV19_mProFiles.zip : PDB formatted inputs and top model for SARS-CoV2 mPro.</p> <p>ScaffoldMatcherBenchmarkFiles_20230410.zip : PDB formatted benchmark inputs and top models.</p>
Civil War Monument CloudCompare (Face Aligned)
The American Civil War monument dedicated to General Lee located near Bradfordville, FL. This is an experiment to test CloudCompare software by comparing the [2016 version](https://sketchfab.com/models/8e753b01f9594236bc2840f53c5d10e1) of this monument to the [2017 version](https://sketchfab.com/models/7a678d7bc8af477489c1ed287d9ac1ad) after the stone slab was knocked over and reset. Since the stone was reset slightly differently than before, two different comparisons were necessary. This version aligns the face, you can find the base-aligned version [here](https://sketchfab.com/models/89bc45eca9ae4b7b8ff5513dd9778fc8). The model is of the 2016 version, the colors represent how the 2017 version has changed. Blue means very similar, Red means very dissimilar. * Point cloud created using Agixoft PhotoScan. * Comparison created using CloudCompare * Made from 72 Photos taken with a Canon PowerShot A2500. * Photos and modeling by Tristan Harrenstein Source: Objaverse 1.0 / Sketchfab
extHomFam v37.0: structural benchmark for protein multiple sequence alignments
<p>extHomFam v37.0 was constructed by combining Homstrad reference alignments (2 December 2023 release) with Pfam 37.0 (UniProt release) families containing at least 200 sequences. Homstrad entries with less than 3 reference sequences and those pointing to dead Pfam families were discarded.</p> <p> </p>
Advance Care Planning: Promoting Effective and Aligned Communication in the Elderly
ClinicalTrials.gov study NCT03609177. IPD Sharing: NO. Countries: 1. Publications: 3.
Effectiveness of Core Stability Exercises on Foot Posture, Function and Limb Alignment in Flexible Flat Feet Patients
ClinicalTrials.gov study NCT06567509. IPD Sharing: Not stated. Countries: 0. Publications: 4.
Alignment of PrEP Use With HIV Risk in Young Women and Men
ClinicalTrials.gov study NCT04664998. IPD Sharing: NO. Countries: 1. Publications: 1.
OrthoPulse™ and Its Effect on the Rate of Orthodontic Tooth Alignment: A Pilot Feasibility Study
ClinicalTrials.gov study NCT02267837. IPD Sharing: Not stated. Countries: 1. Publications: 20.
Implementation of Women's Health Patient Aligned Care Teams
ClinicalTrials.gov study NCT02039856. IPD Sharing: NO. Countries: 1. Publications: 24.
Comparative Effect of Clear Aligner Mandibular Advancement and Twin Block Appliances in Class II Malocclusion
ClinicalTrials.gov study NCT06609733. IPD Sharing: NO. Countries: 1. Publications: 1.
Functionally Aligned vs Mechanical Axis Aligned Total Knee Arthroplasty
ClinicalTrials.gov study NCT04748510. IPD Sharing: NO. Countries: 1. Publications: 1.
Aligning Patient Preferences: a Role Offering Alzheimer's Patients, Caregivers, and Healthcare Providers Education and Support
ClinicalTrials.gov study NCT03323502. IPD Sharing: Not stated. Countries: 1. Publications: 1.
Aligning Medications With What Matters Most
ClinicalTrials.gov study NCT04938648. IPD Sharing: Not stated. Countries: 1. Publications: 8.
The Effects of Extraoral Photobiomodulation on the Rate of Orthodontic Alignment
ClinicalTrials.gov study NCT02267824. IPD Sharing: Not stated. Countries: 3. Publications: 19.
System Alignment for VaccinE Delivery (SAVED): Improving Rates of Influenza and Pneumococcal Vaccination Through Patient Outreach, Improved Medical Record Accuracy and Targeted Physician Alerts
ClinicalTrials.gov study NCT02266277. IPD Sharing: NO. Countries: 1. Publications: 3.
Conventional Alignment System Versus Surgical Navigation System in Total Knee Arthroplasty
ClinicalTrials.gov study NCT01797731. IPD Sharing: Not stated. Countries: 1. Publications: 5.
Comparison of Distalization of Maxillary First and Second Molars Between a Miniscrew Implant Supported Device and Clear Aligners.
ClinicalTrials.gov study NCT07040176. IPD Sharing: YES. Countries: 1. Publications: 4.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
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DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.